USF1 Gene Set

Dataset MotifMap Predicted Transcription Factor Targets
Category genomics
Type transcription factor
Description upstream transcription factor 1|This gene encodes a member of the basic helix-loop-helix leucine zipper family, and can function as a cellular transcription factor. The encoded protein can activate transcription through pyrimidine-rich initiator (Inr) elements and E-box motifs. This gene has been linked to familial combined hyperlipidemia (FCHL). Alternative splicing of this gene results in multiple transcript variants. A related pseudogene has been defined on chromosome 21. [provided by RefSeq, Feb 2013] (NCBI Entrez Gene Database, 7391)
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Genes

187 target genes of the USF1 transcription factor predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.

Symbol Name
AATF apoptosis antagonizing transcription factor
ACTN1 actinin, alpha 1
ADAM33 ADAM metallopeptidase domain 33
ADAM8 ADAM metallopeptidase domain 8
ADNP2 ADNP homeobox 2
AGTRAP angiotensin II receptor-associated protein
AKAP12 A kinase (PRKA) anchor protein 12
ALDH3A2 aldehyde dehydrogenase 3 family, member A2
ALDH3B1 aldehyde dehydrogenase 3 family, member B1
ALDOA aldolase A, fructose-bisphosphate
AMDHD2 amidohydrolase domain containing 2
APEX1 APEX nuclease (multifunctional DNA repair enzyme) 1
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
ARFIP2 ADP-ribosylation factor interacting protein 2
ARHGAP44 Rho GTPase activating protein 44
ARL2 ADP-ribosylation factor-like 2
ARL2-SNX15 ARL2-SNX15 readthrough (NMD candidate)
ARMC9 armadillo repeat containing 9
ARMT1 acidic residue methyltransferase 1
ATOH8 atonal homolog 8 (Drosophila)
ATP2B2 ATPase, Ca++ transporting, plasma membrane 2
ATP5G1 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
ATP6V0B ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b
ATP6V0E1 ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1
BAX BCL2-associated X protein
BCAS3 breast carcinoma amplified sequence 3
BCL11A B-cell CLL/lymphoma 11A (zinc finger protein)
BHLHE40 basic helix-loop-helix family, member e40
BLOC1S3 biogenesis of lysosomal organelles complex-1, subunit 3
BMP2K BMP2 inducible kinase
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like
BRD2 bromodomain containing 2
BTK Bruton agammaglobulinemia tyrosine kinase
BUB3 BUB3 mitotic checkpoint protein
C15ORF41 chromosome 15 open reading frame 41
C18ORF8 chromosome 18 open reading frame 8
C4B_2 complement component 4B (Chido blood group), copy 2
C4ORF19 chromosome 4 open reading frame 19
CDK14 cyclin-dependent kinase 14
CEP95 centrosomal protein 95kDa
CGN cingulin
CIRH1A cirrhosis, autosomal recessive 1A (cirhin)
CREBRF CREB3 regulatory factor
DACT3-AS1 DACT3 antisense RNA 1
DBP D site of albumin promoter (albumin D-box) binding protein
DHX35 DEAH (Asp-Glu-Ala-His) box polypeptide 35
ECE2 endothelin converting enzyme 2
EIF3F eukaryotic translation initiation factor 3, subunit F
EIF3K eukaryotic translation initiation factor 3, subunit K
EN2 engrailed homeobox 2
EYA4 EYA transcriptional coactivator and phosphatase 4
FAM118B family with sequence similarity 118, member B
FGF11 fibroblast growth factor 11
FOXD3 forkhead box D3
FRAS1 Fraser extracellular matrix complex subunit 1
FXR1 fragile X mental retardation, autosomal homolog 1
G6PC3 glucose 6 phosphatase, catalytic, 3
GK glycerol kinase
GLB1L3 galactosidase, beta 1-like 3
GRIA2 glutamate receptor, ionotropic, AMPA 2
HELT helt bHLH transcription factor
HLX H2.0-like homeobox
HMGN2 high mobility group nucleosomal binding domain 2
HMOX1 heme oxygenase 1
HOXA-AS3 HOXA cluster antisense RNA 3
HOXA11-AS HOXA11 antisense RNA
HOXC12 homeobox C12
HOXC13 homeobox C13
HSF2 heat shock transcription factor 2
HSPA4 heat shock 70kDa protein 4
IGSF9 immunoglobulin superfamily, member 9
IKZF1 IKAROS family zinc finger 1 (Ikaros)
ILF3 interleukin enhancer binding factor 3, 90kDa
INTS5 integrator complex subunit 5
KANSL1-AS1 KANSL1 antisense RNA 1
KAT5 K(lysine) acetyltransferase 5
KCNA2 potassium channel, voltage gated shaker related subfamily A, member 2
L3MBTL1 l(3)mbt-like 1 (Drosophila)
LINC00936 long intergenic non-protein coding RNA 936
LMLN leishmanolysin-like (metallopeptidase M8 family)
LOC283692
LRFN4 leucine rich repeat and fibronectin type III domain containing 4
LRRC9 leucine rich repeat containing 9
LZTS2 leucine zipper, putative tumor suppressor 2
MAEL maelstrom spermatogenic transposon silencer
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene)
MAPRE2 microtubule-associated protein, RP/EB family, member 2
MCM8 minichromosome maintenance complex component 8
MGA MGA, MAX dimerization protein
MIR143HG MIR143 host gene
MIR196A1 microRNA 196a-1
MIR19B1 microRNA 19b-1
MIR33A microRNA 33a
MIR939 microRNA 939
MLX MLX, MAX dimerization protein
MORF4L2-AS1 MORF4L2 antisense RNA 1
MRPL49 mitochondrial ribosomal protein L49
MTDH metadherin
MVB12B multivesicular body subunit 12B
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric
MYO9B myosin IXB
NARS asparaginyl-tRNA synthetase
NET1 neuroepithelial cell transforming 1
NFASC neurofascin
NFKBIE nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon
NIT1 nitrilase 1
NLRC5 NLR family, CARD domain containing 5
NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1
OGDH oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
P4HTM prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)
PA2G4 proliferation-associated 2G4, 38kDa
PCP2 Purkinje cell protein 2
PEAR1 platelet endothelial aggregation receptor 1
PFAS phosphoribosylformylglycinamidine synthase
PHF23 PHD finger protein 23
PLA2G4A phospholipase A2, group IVA (cytosolic, calcium-dependent)
PLEKHG2 pleckstrin homology domain containing, family G (with RhoGef domain) member 2
PNLDC1 poly(A)-specific ribonuclease (PARN)-like domain containing 1
POP1 processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)
PPARGC1B peroxisome proliferator-activated receptor gamma, coactivator 1 beta
PPIF peptidylprolyl isomerase F
PRPF39 pre-mRNA processing factor 39
RASGRF2 Ras protein-specific guanine nucleotide-releasing factor 2
RHOA ras homolog family member A
RNFT2 ring finger protein, transmembrane 2
RPA1 replication protein A1, 70kDa
RRAGB Ras-related GTP binding B
SAMD12-AS1 SAMD12 antisense RNA 1
SC5D sterol-C5-desaturase
SEC11C SEC11 homolog C (S. cerevisiae)
SEPT2 septin 2
SHMT2 serine hydroxymethyltransferase 2 (mitochondrial)
SIRT1 sirtuin 1
SLC16A13 solute carrier family 16, member 13
SLC25A31 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31
SLC25A33 solute carrier family 25 (pyrimidine nucleotide carrier), member 33
SLC25A44 solute carrier family 25, member 44
SLC26A2 solute carrier family 26 (anion exchanger), member 2
SLC31A2 solute carrier family 31 (copper transporter), member 2
SLC35E3 solute carrier family 35, member E3
SLC39A10 solute carrier family 39 (zinc transporter), member 10
SNAP29 synaptosomal-associated protein, 29kDa
SNORA68 small nucleolar RNA, H/ACA box 68
SNORD105B small nucleolar RNA, C/D box 105B
SNRNP48 small nuclear ribonucleoprotein 48kDa (U11/U12)
SNRPA small nuclear ribonucleoprotein polypeptide A
SOCS5 suppressor of cytokine signaling 5
STAG3 stromal antigen 3
STK31 serine/threonine kinase 31
STK4 serine/threonine kinase 4
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic)
SUV420H2 suppressor of variegation 4-20 homolog 2 (Drosophila)
SYNGAP1 synaptic Ras GTPase activating protein 1
TAF4B TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa
TAF6L TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa
TAPBP TAP binding protein (tapasin)
TATDN2 TatD DNase domain containing 2
TBCB tubulin folding cofactor B
TBX6 T-box 6
TCERG1 transcription elongation regulator 1
TEF thyrotrophic embryonic factor
TJP3 tight junction protein 3
TLL1 tolloid-like 1
TMEM132E transmembrane protein 132E
TMEM134 transmembrane protein 134
TOP1 topoisomerase (DNA) I
TSR2 TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)
TUBB tubulin, beta class I
U2AF2 U2 small nuclear RNA auxiliary factor 2
U2SURP U2 snRNP-associated SURP domain containing
UBN1 ubinuclein 1
UBXN1 UBX domain protein 1
UNC119 unc-119 homolog (C. elegans)
UNC5A unc-5 homolog A (C. elegans)
UNKL unkempt family zinc finger-like
UTP20 UTP20, small subunit (SSU) processome component, homolog (yeast)
VPS16 vacuolar protein sorting 16 homolog (S. cerevisiae)
WDR17 WD repeat domain 17
WEE1 WEE1 G2 checkpoint kinase
YPEL5 yippee-like 5 (Drosophila)
ZC2HC1C zinc finger, C2HC-type containing 1C
ZFP91 ZFP91 zinc finger protein
ZFP91-CNTF ZFP91-CNTF readthrough (NMD candidate)
ZNF292 zinc finger protein 292
ZNF503-AS2 ZNF503 antisense RNA 2
ZNF653 zinc finger protein 653
ZRANB2-AS2 ZRANB2 antisense RNA 2 (head to head)