Uridine_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Uridine perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Uridine_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
KRT17 keratin 17, type I 0.141465
NAMPT nicotinamide phosphoribosyltransferase 0.130237
ELL2 elongation factor, RNA polymerase II, 2 0.119148
NDRG1 N-myc downstream regulated 1 0.105017
FN1 fibronectin 1 0.103354
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.10221
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0870669
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 0.0836588
CEMIP cell migration inducing protein, hyaluronan binding 0.0781431
FTH1 ferritin, heavy polypeptide 1 0.0750974
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0690628
SACK1A scaffolding CK1 anchoring protein A 0.068999
S100A9 S100 calcium binding protein A9 0.0687983
SETD5 SET domain containing 5 0.0665643
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0648217
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0647149
BZW1 basic leucine zipper and W2 domains 1 0.0639414
MT2A metallothionein 2A 0.0619586
FNDC3B fibronectin type III domain containing 3B 0.0616695
PTMA prothymosin, alpha 0.0594154
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.059414
MCL1 myeloid cell leukemia 1 0.0583385
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 0.0570048
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0503011
DSCAM Down syndrome cell adhesion molecule 0.0501916
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0498635
FRY furry homolog (Drosophila) 0.0495882
PKM pyruvate kinase, muscle 0.049545
CSTB cystatin B (stefin B) 0.0485937
CXXC1 CXXC finger protein 1 0.0478418
NABP1 nucleic acid binding protein 1 0.0462866
FLNB filamin B, beta 0.0460157
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0451159
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0450489
FBXL5 F-box and leucine-rich repeat protein 5 0.0447965
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0445278
F3 coagulation factor III (thromboplastin, tissue factor) 0.0442502
AKAP13 A kinase (PRKA) anchor protein 13 0.04353
ZNF207 zinc finger protein 207 0.0426581
HOOK2 hook microtubule-tethering protein 2 0.0422505
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0420894
TM4SF1 transmembrane 4 L six family member 1 0.0417122
LAMC2 laminin, gamma 2 0.0415016
KYNU kynureninase 0.0413844
NAP1L1 nucleosome assembly protein 1-like 1 0.0408074
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.039755
CNOT2 CCR4-NOT transcription complex, subunit 2 0.0394461
PDE10A phosphodiesterase 10A 0.0390256
PGK1 phosphoglycerate kinase 1 0.0389879
SEPTIN9 septin 9 0.0386767
ZMYND8 zinc finger, MYND-type containing 8 0.0377052
AGFG1 ArfGAP with FG repeats 1 0.0371999
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0371354
ANXA2 annexin A2 0.0364679
ACTN4 actinin, alpha 4 0.0362467
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0357986
SEPTIN7 septin 7 0.0356854
PNPLA8 patatin-like phospholipase domain containing 8 0.0354441
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0352552
LOC112694756 uncharaterized LOC112694756 0.0352475
SAMD4A sterile alpha motif domain containing 4A 0.0351358
ATP13A3 ATPase type 13A3 0.0342961
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0341781
TP53BP2 tumor protein p53 binding protein 2 0.0341437
PDPK1 3-phosphoinositide dependent protein kinase 1 0.0334306
RUNX1 runt-related transcription factor 1 0.0329772
DOCK5 dedicator of cytokinesis 5 0.0327136
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0325236
IQGAP1 IQ motif containing GTPase activating protein 1 0.0324212
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0324101
TXNIP thioredoxin interacting protein 0.0320858
STEAP4 STEAP family member 4 0.0317511
ELOF1 elongation factor 1 homolog (S. cerevisiae) 0.0314515
PCBP2 poly(rC) binding protein 2 0.0314079
PDIA3 protein disulfide isomerase family A, member 3 0.0314047
RPS12 ribosomal protein S12 0.0313285
PUM2 pumilio RNA-binding family member 2 0.0312295
SMAD3 SMAD family member 3 0.0304937
RAB2A RAB2A, member RAS oncogene family 0.0303307
EZR ezrin 0.0300825
FBXL13 F-box and leucine-rich repeat protein 13 0.0292918
MYH9 myosin, heavy chain 9, non-muscle 0.0290444
PPARD peroxisome proliferator-activated receptor delta 0.0288786
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.0288701
WDR26 WD repeat domain 26 0.0285048
ARPC1B actin related protein 2/3 complex, subunit 1B, 41kDa 0.0282384
FAM13A family with sequence similarity 13, member A 0.0281205
WDR45B WD repeat domain 45B 0.0280283
PRELID2 PRELI domain containing 2 0.0278551
ARID5B AT rich interactive domain 5B (MRF1-like) 0.027831
FGFR1 fibroblast growth factor receptor 1 0.0277485
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0274501
PLAUR plasminogen activator, urokinase receptor 0.0271808
KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 0.0269564
ARRDC3 arrestin domain containing 3 0.0266875
KIF5B kinesin family member 5B 0.0263995
BAIAP2L1 BAI1-associated protein 2-like 1 0.0263052
STK24 serine/threonine kinase 24 0.0262259
DSPP dentin sialophosphoprotein 0.0259218
ETV6 ets variant 6 0.0257542

decreased expression

Symbol Name Standardized Value
IFIH1 interferon induced with helicase C domain 1 -0.142708
SPAG9 sperm associated antigen 9 -0.0936812
GRB10 growth factor receptor-bound protein 10 -0.0936251
FNDC3A fibronectin type III domain containing 3A -0.0788639
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0783622
RIGI RNA sensor RIG-I -0.0767585
MUC16 mucin 16, cell surface associated -0.0740291
SH3KBP1 SH3-domain kinase binding protein 1 -0.0678278
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0652396
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0648858
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0619976
B2M beta-2-microglobulin -0.0590631
MAST4 microtubule associated serine/threonine kinase family member 4 -0.0584034
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0581778
XPR1 xenotropic and polytropic retrovirus receptor 1 -0.0538665
COPA coatomer protein complex, subunit alpha -0.0536394
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 -0.052399
PELI1 pellino E3 ubiquitin protein ligase 1 -0.0523646
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0511275
LGALS3 lectin, galactoside-binding, soluble, 3 -0.0508054
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0470522
ESYT2 extended synaptotagmin-like protein 2 -0.0464785
SVIL supervillin -0.0451585
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0443344
OSBPL10 oxysterol binding protein-like 10 -0.0431997
SQSTM1 sequestosome 1 -0.0431789
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0430496
NF1 neurofibromin 1 -0.0418523
PAPOLA poly(A) polymerase alpha -0.0414377
EXT1 exostosin glycosyltransferase 1 -0.0410544
PSD3 pleckstrin and Sec7 domain containing 3 -0.0409452
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme -0.0406756
MYO1E myosin IE -0.0405623
FBXO11 F-box protein 11 -0.039809
NEK7 NIMA-related kinase 7 -0.0392477
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0389823
COG5 component of oligomeric golgi complex 5 -0.038723
RNF149 ring finger protein 149 -0.0386294
MON2 MON2 homolog (S. cerevisiae) -0.0384964
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0378075
LMO7 LIM domain 7 -0.0373725
MFSD14A major facilitator superfamily domain containing 14A -0.0373684
GARS1 glycyl-tRNA synthetase 1 -0.0372562
FOXP1 forkhead box P1 -0.0371904
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0371498
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0366271
ZNF451 zinc finger protein 451 -0.0365711
TJP1 tight junction protein 1 -0.0364836
PTPRD protein tyrosine phosphatase, receptor type, D -0.0364123
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) -0.0361401
NRG1 neuregulin 1 -0.0357549
KDM6A lysine (K)-specific demethylase 6A -0.0343601
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0342181
PTEN phosphatase and tensin homolog -0.0342156
FCHSD2 FCH and double SH3 domains 2 -0.0342148
LPP LIM domain containing preferred translocation partner in lipoma -0.0339094
MIB1 mindbomb E3 ubiquitin protein ligase 1 -0.0335684
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.0335228
ATXN1 ataxin 1 -0.0334812
SEC31A SEC31 homolog A (S. cerevisiae) -0.0334732
BACE2 beta-site APP-cleaving enzyme 2 -0.0331532
MBOAT2 membrane bound O-acyltransferase domain containing 2 -0.0331454
CCDC6 coiled-coil domain containing 6 -0.0329254
PDE4D phosphodiesterase 4D, cAMP-specific -0.0327896
BMAL2 basic helix-loop-helix ARNT like 2 -0.0327708
FAT1 FAT atypical cadherin 1 -0.0327689
ADAR adenosine deaminase, RNA-specific -0.0327384
UBE2B ubiquitin-conjugating enzyme E2B -0.0321743
ARHGAP26 Rho GTPase activating protein 26 -0.0321656
GOLGB1 golgin B1 -0.0321155
TAS2R14 taste receptor, type 2, member 14 -0.031685
SLMAP sarcolemma associated protein -0.031645
NKTR natural killer cell triggering receptor -0.0315653
MRTFA myocardin related transcription factor A -0.0315099
KANSL1 KAT8 regulatory NSL complex subunit 1 -0.0314314
SMOC1 SPARC related modular calcium binding 1 -0.0312929
THSD4 thrombospondin, type I, domain containing 4 -0.0312874
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0311412
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0307438
DST dystonin -0.0304211
FTO fat mass and obesity associated -0.0303239
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0302554
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0301985
USP6NL USP6 N-terminal like -0.0301907
TTC3 tetratricopeptide repeat domain 3 -0.0294953
SLC38A1 solute carrier family 38, member 1 -0.029352
AHNAK AHNAK nucleoprotein -0.0292942
ATP11B ATPase, class VI, type 11B -0.0290221
NBEAL1 neurobeachin-like 1 -0.0285393
MORC3 MORC family CW-type zinc finger 3 -0.0283853
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0278211
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0277093
ZNF609 zinc finger protein 609 -0.0276669
OASL 2'-5'-oligoadenylate synthetase-like -0.0275035
MED13L mediator complex subunit 13-like -0.0274608
CREBBP CREB binding protein -0.0274597
EPSTI1 epithelial stromal interaction 1 (breast) -0.0274482
KMT2E lysine (K)-specific methyltransferase 2E -0.0271784
BIRC6 baculoviral IAP repeat containing 6 -0.0270844
EGFR epidermal growth factor receptor -0.0270229