Valdecoxib_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Valdecoxib perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Valdecoxib_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.279037
FBN1 fibrillin 1 0.205916
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.157568
DLG1 discs, large homolog 1 (Drosophila) 0.135973
PLAT plasminogen activator, tissue 0.112761
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.103853
COL1A2 collagen, type I, alpha 2 0.0997567
COL3A1 collagen, type III, alpha 1 0.0837059
LOXL2 lysyl oxidase-like 2 0.0822902
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0780017
ERRFI1 ERBB receptor feedback inhibitor 1 0.070337
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0679484
PSD3 pleckstrin and Sec7 domain containing 3 0.0672371
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0669072
B2M beta-2-microglobulin 0.0655464
STC1 stanniocalcin 1 0.0618631
ZBTB20 zinc finger and BTB domain containing 20 0.061277
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0603424
UBC ubiquitin C 0.0541601
APP amyloid beta (A4) precursor protein 0.051354
COL5A2 collagen, type V, alpha 2 0.0508492
SOD2 superoxide dismutase 2, mitochondrial 0.0492403
ADAM17 ADAM metallopeptidase domain 17 0.0478581
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.04679
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.043652
COL8A1 collagen, type VIII, alpha 1 0.0426684
LOX lysyl oxidase 0.0423584
GPC6 glypican 6 0.0420764
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0407927
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0404818
ELL2 elongation factor, RNA polymerase II, 2 0.0388597
THBS2 thrombospondin 2 0.0383158
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0377187
SBF2 SET binding factor 2 0.0372277
IQGAP1 IQ motif containing GTPase activating protein 1 0.0367215
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0364981
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0359295
YEATS2 YEATS domain containing 2 0.0357166
ATP13A3 ATPase type 13A3 0.0354144
ADAM9 ADAM metallopeptidase domain 9 0.0351873
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0347023
CD99 CD99 molecule 0.0346644
MARCHF6 membrane associated ring-CH-type finger 6 0.034161
VIM vimentin 0.0340061
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0335452
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0332528
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0325129
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0324935
ITPRID2 ITPR interacting domain containing 2 0.0321885
ZEB1 zinc finger E-box binding homeobox 1 0.0321214
DST dystonin 0.0319993
FRMD5 FERM domain containing 5 0.0317759
OGA O-GlcNAcase 0.0316607
ARL4C ADP-ribosylation factor-like 4C 0.0312371
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0306049
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0299144
TXNIP thioredoxin interacting protein 0.0298298
ZEB2 zinc finger E-box binding homeobox 2 0.029799
MT2A metallothionein 2A 0.0294512
FBXL2 F-box and leucine-rich repeat protein 2 0.02912
MYADM myeloid-associated differentiation marker 0.0289037
SERINC3 serine incorporator 3 0.0287439
NGLY1 N-glycanase 1 0.0287359
RAI14 retinoic acid induced 14 0.0285355
EXOC6B exocyst complex component 6B 0.0284519
CCDC88A coiled-coil domain containing 88A 0.0283399
CD44 CD44 molecule (Indian blood group) 0.0280262
DPYSL3 dihydropyrimidinase-like 3 0.0279482
OPTN optineurin 0.0278969
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0278814
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.0278749
SH3BP5 SH3-domain binding protein 5 (BTK-associated) 0.0277622
MT1X metallothionein 1X 0.0276535
WDFY1 WD repeat and FYVE domain containing 1 0.0274303
GLS2 glutaminase 2 (liver, mitochondrial) 0.0273823
ZNF148 zinc finger protein 148 0.0271589
TPM3 tropomyosin 3 0.0266991
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.026678
PCGF5 polycomb group ring finger 5 0.0265927
ZFP36L1 ZFP36 ring finger protein-like 1 0.0264161
GLG1 golgi glycoprotein 1 0.0261991
TNIP1 TNFAIP3 interacting protein 1 0.0260567
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0258482
FNDC3B fibronectin type III domain containing 3B 0.0258467
ANXA2 annexin A2 0.0256367
ITCH itchy E3 ubiquitin protein ligase 0.025603
MBNL2 muscleblind-like splicing regulator 2 0.0254896
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0254857
PRRC2C proline-rich coiled-coil 2C 0.0254046
WASHC4 WASH complex subunit 4 0.0251299
XPO1 exportin 1 0.0251147
ANO6 anoctamin 6 0.0250439
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0250386
CALU calumenin 0.0245905
CD109 CD109 molecule 0.0245356
LIFR leukemia inhibitory factor receptor alpha 0.0243862
GPBP1 GC-rich promoter binding protein 1 0.0240898
MARK3 MAP/microtubule affinity-regulating kinase 3 0.0239478
HLA-E major histocompatibility complex, class I, E 0.0238637
AVL9 AVL9 homolog (S. cerevisiase) 0.0238405

decreased expression

Symbol Name Standardized Value
COL5A1 collagen, type V, alpha 1 -0.13946
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.137261
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.115818
CDH13 cadherin 13 -0.112664
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.106305
PODXL podocalyxin-like -0.102743
TMSB10 thymosin beta 10 -0.0772569
FN1 fibronectin 1 -0.0760242
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 -0.0632537
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0592769
POTEF POTE ankyrin domain family, member F -0.0541799
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0531885
EGFR epidermal growth factor receptor -0.0530848
ANKRD11 ankyrin repeat domain 11 -0.0530302
EFNA5 ephrin-A5 -0.0528674
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0504003
LMNA lamin A/C -0.0502207
S100A10 S100 calcium binding protein A10 -0.0502173
ABI3BP ABI family, member 3 (NESH) binding protein -0.0494133
NDRG1 N-myc downstream regulated 1 -0.0478922
RIGI RNA sensor RIG-I -0.0474707
RUNX1 runt-related transcription factor 1 -0.0472572
FLNA filamin A, alpha -0.0456136
NAV1 neuron navigator 1 -0.0455436
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0451101
RPL35A ribosomal protein L35a -0.0426
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0418451
AHNAK AHNAK nucleoprotein -0.041484
TPT1 tumor protein, translationally-controlled 1 -0.0396183
HLA-B major histocompatibility complex, class I, B -0.03866
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0371691
RRBP1 ribosome binding protein 1 -0.0354676
SORBS2 sorbin and SH3 domain containing 2 -0.0352273
TRIO trio Rho guanine nucleotide exchange factor -0.0347169
MBNL1 muscleblind-like splicing regulator 1 -0.0345915
RPL23 ribosomal protein L23 -0.0345219
SQSTM1 sequestosome 1 -0.0341342
FSTL1 follistatin-like 1 -0.0335954
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0334686
LOC112694756 uncharaterized LOC112694756 -0.0330933
CUX1 cut-like homeobox 1 -0.0328332
ANKRD12 ankyrin repeat domain 12 -0.0323421
ACTG1 actin gamma 1 -0.031916
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 -0.0316204
MAP1B microtubule-associated protein 1B -0.0316058
ISG15 ISG15 ubiquitin-like modifier -0.0308724
CYTH3 cytohesin 3 -0.0302428
MACF1 microtubule-actin crosslinking factor 1 -0.029913
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0297427
IL7R interleukin 7 receptor -0.0292229
RPLP1 ribosomal protein, large, P1 -0.0289951
RPS8 ribosomal protein S8 -0.0289175
KDM4B lysine (K)-specific demethylase 4B -0.0288246
TLE4 transducin-like enhancer of split 4 -0.0286802
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 -0.0284583
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0282768
RPS12 ribosomal protein S12 -0.0279066
SAMD9 sterile alpha motif domain containing 9 -0.0276966
SLC39A11 solute carrier family 39, member 11 -0.0276918
PLXNA2 plexin A2 -0.0276269
HSPB1 heat shock 27kDa protein 1 -0.0275643
BHLHE40 basic helix-loop-helix family, member e40 -0.026849
DCLK2 doublecortin-like kinase 2 -0.026704
GOLGB1 golgin B1 -0.0266514
RPS24 ribosomal protein S24 -0.0262241
RASAL2 RAS protein activator like 2 -0.0256875
DENND1A DENN/MADD domain containing 1A -0.0255181
EXT1 exostosin glycosyltransferase 1 -0.0251226
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0250661
CD59 CD59 molecule, complement regulatory protein -0.0248969
ALCAM activated leukocyte cell adhesion molecule -0.0246826
PCDH7 protocadherin 7 -0.0244676
HS3ST3A1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 -0.024405
CDPF1 cysteine-rich, DPF motif domain containing 1 -0.0243088
SP100 SP100 nuclear antigen -0.024219
RPL28 ribosomal protein L28 -0.0240703
RPS3 ribosomal protein S3 -0.0240394
OASL 2'-5'-oligoadenylate synthetase-like -0.0239343
XKR6 XK, Kell blood group complex subunit-related family, member 6 -0.0238388
FBXL7 F-box and leucine-rich repeat protein 7 -0.0238088
CCND1 cyclin D1 -0.0237043
FNDC3A fibronectin type III domain containing 3A -0.0234159
HDAC9 histone deacetylase 9 -0.023266
MSI2 musashi RNA-binding protein 2 -0.0231007
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0229892
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0229293
INTS6 integrator complex subunit 6 -0.0227069
RPTOR regulatory associated protein of MTOR, complex 1 -0.02256
S100A6 S100 calcium binding protein A6 -0.0225057
RPS19 ribosomal protein S19 -0.0224697
GADD45A growth arrest and DNA-damage-inducible, alpha -0.0223942
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0222416
MED13L mediator complex subunit 13-like -0.0221181
IPO9 importin 9 -0.0219765
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0219231
ADARB1 adenosine deaminase, RNA-specific, B1 -0.021891
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.021885
KIAA1549L KIAA1549-like -0.0217906
SDK1 sidekick cell adhesion molecule 1 -0.0217814
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0217765