Valdecoxib_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Valdecoxib perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Valdecoxib_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.148144
KYNU kynureninase 0.133795
ELL2 elongation factor, RNA polymerase II, 2 0.0916746
KRT17 keratin 17, type I 0.0887928
FTL ferritin, light polypeptide 0.087383
NAMPT nicotinamide phosphoribosyltransferase 0.0842667
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0816631
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.0730342
ANLN anillin, actin binding protein 0.0712137
HOOK2 hook microtubule-tethering protein 2 0.0682596
KMT2E lysine (K)-specific methyltransferase 2E 0.0673597
FNDC3B fibronectin type III domain containing 3B 0.0667254
PDE4D phosphodiesterase 4D, cAMP-specific 0.0647163
FAT1 FAT atypical cadherin 1 0.063658
FAM193A family with sequence similarity 193, member A 0.0634092
ASPH aspartate beta-hydroxylase 0.0616503
RPL31 ribosomal protein L31 0.0614406
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0613139
PCBP2 poly(rC) binding protein 2 0.0612896
S100P S100 calcium binding protein P 0.0605258
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0565308
TSC22D2 TSC22 domain family, member 2 0.0565024
WSB1 WD repeat and SOCS box containing 1 0.0519857
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) 0.0515913
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0487376
YTHDC1 YTH domain containing 1 0.0478294
BASP1 brain abundant, membrane attached signal protein 1 0.0478106
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0477446
RPL7 ribosomal protein L7 0.047726
PNISR PNN-interacting serine/arginine-rich protein 0.0470138
UGP2 UDP-glucose pyrophosphorylase 2 0.0470057
ZNF207 zinc finger protein 207 0.0463918
EIF1 eukaryotic translation initiation factor 1 0.0456564
SAR1A secretion associated, Ras related GTPase 1A 0.0431373
FAF2 Fas associated factor family member 2 0.0431231
SEC31A SEC31 homolog A (S. cerevisiae) 0.0429447
HILPDA hypoxia inducible lipid droplet-associated 0.0426635
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 0.0399503
SPAG9 sperm associated antigen 9 0.0398867
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0396658
LYN LYN proto-oncogene, Src family tyrosine kinase 0.0387942
NUP58 nucleoporin 58 0.0384544
BTBD7 BTB (POZ) domain containing 7 0.0383297
RPLP1 ribosomal protein, large, P1 0.0380963
RPS3 ribosomal protein S3 0.0378268
NOP58 NOP58 ribonucleoprotein 0.0377435
KDM3A lysine (K)-specific demethylase 3A 0.0371685
DDIT4 DNA-damage-inducible transcript 4 0.036963
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0364746
LAMB3 laminin, beta 3 0.0362146
TXNRD1 thioredoxin reductase 1 0.0358138
RACK1 receptor for activated C kinase 1 0.0353273
STRN3 striatin, calmodulin binding protein 3 0.0353066
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 0.0344481
LMAN1 lectin, mannose-binding, 1 0.0328915
PDLIM5 PDZ and LIM domain 5 0.0328623
CHD1 chromodomain helicase DNA binding protein 1 0.03273
ZFAND3 zinc finger, AN1-type domain 3 0.0321441
SACK1A scaffolding CK1 anchoring protein A 0.0321072
RAB8B RAB8B, member RAS oncogene family 0.0319775
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0317647
FAM13A family with sequence similarity 13, member A 0.0310803
PKM pyruvate kinase, muscle 0.0305562
CHD1L chromodomain helicase DNA binding protein 1-like 0.0303943
BRD2 bromodomain containing 2 0.0302521
RAB7A RAB7A, member RAS oncogene family 0.0300685
CANX calnexin 0.0295097
CNOT2 CCR4-NOT transcription complex, subunit 2 0.027811
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0272316
GOLGB1 golgin B1 0.0271156
TM4SF1 transmembrane 4 L six family member 1 0.0255378
COPB1 coatomer protein complex, subunit beta 1 0.0253345
ERRFI1 ERBB receptor feedback inhibitor 1 0.0246699
PGK1 phosphoglycerate kinase 1 0.0244863
HELZ helicase with zinc finger 0.0239354
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0236975
BIRC6 baculoviral IAP repeat containing 6 0.0236452
RPL8 ribosomal protein L8 0.0232404
HMGA1 high mobility group AT-hook 1 0.0228703
SMYD3 SET and MYND domain containing 3 0.0225736
TPT1 tumor protein, translationally-controlled 1 0.0223897
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0221508
MARCHF6 membrane associated ring-CH-type finger 6 0.0219961
PDE10A phosphodiesterase 10A 0.0218987
PARD3 par-3 family cell polarity regulator 0.0218275
UBE2O ubiquitin-conjugating enzyme E2O 0.0218175
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0214413
WAC WW domain containing adaptor with coiled-coil 0.0209254
RB1CC1 RB1-inducible coiled-coil 1 0.0208948
TMSB10 thymosin beta 10 0.018648
PTMA prothymosin, alpha 0.0180178
MBNL1 muscleblind-like splicing regulator 1 0.0178348
RTN4 reticulon 4 0.0177909
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0177662
KIF5B kinesin family member 5B 0.0177515
AGO3 argonaute RISC catalytic component 3 0.0176016
STAU1 staufen double-stranded RNA binding protein 1 0.0174148
GOLGA4 golgin A4 0.0167753
CLASP1 cytoplasmic linker associated protein 1 0.0166379
RND3 Rho family GTPase 3 0.0145484

decreased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.183597
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.123028
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.113403
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.111609
MUC16 mucin 16, cell surface associated -0.110284
GRB10 growth factor receptor-bound protein 10 -0.105959
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.105957
NDRG1 N-myc downstream regulated 1 -0.104685
BACE2 beta-site APP-cleaving enzyme 2 -0.102535
ESYT2 extended synaptotagmin-like protein 2 -0.0907998
IGF1R insulin-like growth factor 1 receptor -0.0901677
MACF1 microtubule-actin crosslinking factor 1 -0.0786085
CEMIP cell migration inducing protein, hyaluronan binding -0.0748371
MAST4 microtubule associated serine/threonine kinase family member 4 -0.0745855
MYO1E myosin IE -0.0743863
COL6A3 collagen, type VI, alpha 3 -0.0731201
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0691512
PTPRM protein tyrosine phosphatase, receptor type, M -0.0679639
HLA-B major histocompatibility complex, class I, B -0.0658056
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.063902
LPP LIM domain containing preferred translocation partner in lipoma -0.0633377
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0628971
EMP1 epithelial membrane protein 1 -0.06171
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0607783
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0599762
ATP13A3 ATPase type 13A3 -0.0597103
B2M beta-2-microglobulin -0.0593697
CSNK1A1 casein kinase 1, alpha 1 -0.0592974
NF1 neurofibromin 1 -0.0577547
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0567783
SRPK2 SRSF protein kinase 2 -0.0539306
LMO7 LIM domain 7 -0.053135
SVIL supervillin -0.0522342
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0516098
JMJD1C jumonji domain containing 1C -0.0514207
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -0.0509636
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.050827
TAS2R14 taste receptor, type 2, member 14 -0.0507947
AFTPH aftiphilin -0.0499357
RBM39 RNA binding motif protein 39 -0.0498585
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.048212
EGFR epidermal growth factor receptor -0.0477539
CALR calreticulin -0.0476608
SPIRE1 spire-type actin nucleation factor 1 -0.0474637
SQSTM1 sequestosome 1 -0.0473133
AHNAK AHNAK nucleoprotein -0.0472785
RAD51B RAD51 paralog B -0.0449159
IFIH1 interferon induced with helicase C domain 1 -0.0434279
RAB1A RAB1A, member RAS oncogene family -0.0415664
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0407982
GNAQ guanine nucleotide binding protein (G protein), q polypeptide -0.0396806
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0394609
VIM vimentin -0.0387399
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 -0.0381641
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0380983
ANXA2 annexin A2 -0.0380235
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0368556
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0355697
CCNY cyclin Y -0.0348696
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0330548
GPC6 glypican 6 -0.0308782
GLS2 glutaminase 2 (liver, mitochondrial) -0.0308522
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0303669
RPS6 ribosomal protein S6 -0.0302908
ZNF638 zinc finger protein 638 -0.0295946
PCM1 pericentriolar material 1 -0.0268568
RPS2 ribosomal protein S2 -0.0257368
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0256666
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0255514
PTK2 protein tyrosine kinase 2 -0.0252288
GPHN gephyrin -0.0250804
AKAP13 A kinase (PRKA) anchor protein 13 -0.0245283
NIPBL Nipped-B homolog (Drosophila) -0.0244133
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0243379
EXT1 exostosin glycosyltransferase 1 -0.0239527
EEF2 eukaryotic translation elongation factor 2 -0.0237432
SAMD4A sterile alpha motif domain containing 4A -0.0235812
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0234202
PDIA3 protein disulfide isomerase family A, member 3 -0.0233445
AK1 adenylate kinase 1 -0.0231515
ZNF292 zinc finger protein 292 -0.022389
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0220918
TRIO trio Rho guanine nucleotide exchange factor -0.0218726
ELF2 E74-like factor 2 (ets domain transcription factor) -0.0203574
GNAS GNAS complex locus -0.0203536
AKAP12 A kinase (PRKA) anchor protein 12 -0.0200318
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.019909
RUNX1 runt-related transcription factor 1 -0.0189849
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0188899
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0176419
PDPK1 3-phosphoinositide dependent protein kinase 1 -0.0159843
INSIG1 insulin induced gene 1 -0.0155428
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0152894
ENO1 enolase 1, (alpha) -0.0150141
ANKRD11 ankyrin repeat domain 11 -0.0144487
MEF2A myocyte enhancer factor 2A -0.0142717
NAP1L1 nucleosome assembly protein 1-like 1 -0.0140131
APP amyloid beta (A4) precursor protein -0.013822
FN1 fibronectin 1 -0.0137092
DST dystonin -0.0121772