Valdecoxib_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Valdecoxib perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Valdecoxib_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.265964
ERRFI1 ERBB receptor feedback inhibitor 1 0.163085
TXNRD1 thioredoxin reductase 1 0.133759
GRAMD1B GRAM domain containing 1B 0.116277
TRIO trio Rho guanine nucleotide exchange factor 0.0836218
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0823509
STC1 stanniocalcin 1 0.078347
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.074839
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0715603
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0564978
ACTR2 ARP2 actin-related protein 2 homolog (yeast) 0.0522201
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0515754
YBX3 Y box binding protein 3 0.0512133
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0506543
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0498268
DOCK5 dedicator of cytokinesis 5 0.0486506
SLC38A2 solute carrier family 38, member 2 0.0482379
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0482058
PDE4D phosphodiesterase 4D, cAMP-specific 0.047398
MMP12 matrix metallopeptidase 12 0.04637
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0455573
ANO6 anoctamin 6 0.0451489
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0448738
SAMD4A sterile alpha motif domain containing 4A 0.0448444
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0446328
CDK17 cyclin-dependent kinase 17 0.0430542
BASP1 brain abundant, membrane attached signal protein 1 0.0427478
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0423674
MED13L mediator complex subunit 13-like 0.0422249
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0418276
PHF20 PHD finger protein 20 0.0383494
PGK1 phosphoglycerate kinase 1 0.037677
ARHGAP5 Rho GTPase activating protein 5 0.037599
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.037324
ATP11A ATPase, class VI, type 11A 0.0370869
RNF145 ring finger protein 145 0.036547
KTN1 kinectin 1 (kinesin receptor) 0.0365411
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) 0.0362469
CCDC91 coiled-coil domain containing 91 0.0359917
VCL vinculin 0.0359495
SET SET nuclear proto-oncogene 0.0357674
EXOC4 exocyst complex component 4 0.0357046
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0356995
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0354765
POTEF POTE ankyrin domain family, member F 0.0354682
ADAM17 ADAM metallopeptidase domain 17 0.0347463
TPM3 tropomyosin 3 0.0347036
CSNK1A1 casein kinase 1, alpha 1 0.0346777
WSB1 WD repeat and SOCS box containing 1 0.0344291
RASAL2 RAS protein activator like 2 0.034247
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0339247
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0338953
DST dystonin 0.0330622
RTN4 reticulon 4 0.0330199
PDLIM5 PDZ and LIM domain 5 0.0327027
SERINC3 serine incorporator 3 0.0325534
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0323365
MYOF myoferlin 0.0321338
NFE2L2 nuclear factor, erythroid 2-like 2 0.0319654
PLCB4 phospholipase C, beta 4 0.0315449
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0314071
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0313948
RUSC2 RUN and SH3 domain containing 2 0.0312339
BICD1 bicaudal D homolog 1 (Drosophila) 0.0311144
MACF1 microtubule-actin crosslinking factor 1 0.0310636
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0297573
HNRNPK heterogeneous nuclear ribonucleoprotein K 0.0296817
USP34 ubiquitin specific peptidase 34 0.0292449
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0290602
RAB6A RAB6A, member RAS oncogene family 0.0287016
ITSN1 intersectin 1 (SH3 domain protein) 0.0286613
WAC WW domain containing adaptor with coiled-coil 0.0282638
NRDC nardilysin convertase 0.0281893
SMAD3 SMAD family member 3 0.0279577
RAB10 RAB10, member RAS oncogene family 0.0279108
MCL1 myeloid cell leukemia 1 0.0274324
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0274283
FMNL2 formin-like 2 0.0273753
CLTC clathrin, heavy chain (Hc) 0.0272105
BIRC2 baculoviral IAP repeat containing 2 0.0269696
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0269462
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0268892
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0267519
MYPN myopalladin 0.0266655
ZNF638 zinc finger protein 638 0.0265382
NBEAL1 neurobeachin-like 1 0.0265097
TMEM41B transmembrane protein 41B 0.0262678
CCNL1 cyclin L1 0.0258828
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0258561
ADAM9 ADAM metallopeptidase domain 9 0.0254607
TAS2R14 taste receptor, type 2, member 14 0.0253422
ELL2 elongation factor, RNA polymerase II, 2 0.0253132
ZBTB20 zinc finger and BTB domain containing 20 0.0252417
BBX bobby sox homolog (Drosophila) 0.024892
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0246967
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.0245306
OSMR oncostatin M receptor 0.0245003
UBA6 ubiquitin-like modifier activating enzyme 6 0.0244449
BABAM2 BRISC and BRCA1 A complex member 2 0.0241418
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0238394

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0989192
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0948524
PTMA prothymosin, alpha -0.0729017
TMSB10 thymosin beta 10 -0.0578917
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0559442
RPL35A ribosomal protein L35a -0.0545664
RPS8 ribosomal protein S8 -0.0539262
RPL12 ribosomal protein L12 -0.0502562
RPL23 ribosomal protein L23 -0.0464899
GNAS GNAS complex locus -0.0448942
RAD51B RAD51 paralog B -0.0406118
RPL37A ribosomal protein L37a -0.0398695
NAP1L1 nucleosome assembly protein 1-like 1 -0.0358002
RPS19 ribosomal protein S19 -0.0350082
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.0346264
RPL34 ribosomal protein L34 -0.034552
RPLP1 ribosomal protein, large, P1 -0.0343984
TPT1 tumor protein, translationally-controlled 1 -0.0343391
RPL37 ribosomal protein L37 -0.030949
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0297072
RPS3 ribosomal protein S3 -0.0292494
YBX1 Y box binding protein 1 -0.0291288
RPL9 ribosomal protein L9 -0.028491
RPL36 ribosomal protein L36 -0.0281251
RPS10 ribosomal protein S10 -0.0279378
RPL26 ribosomal protein L26 -0.0278765
RPS20 ribosomal protein S20 -0.0278125
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0276359
PFN1 profilin 1 -0.0272697
RPS12 ribosomal protein S12 -0.0255288
H1-0 H1.0 linker histone -0.0255268
ATP5F1E ATP synthase F1 subunit epsilon -0.0254662
WNK1 WNK lysine deficient protein kinase 1 -0.0254579
TMEM131 transmembrane protein 131 -0.0252621
SMC3 structural maintenance of chromosomes 3 -0.0238494
NSD2 nuclear receptor binding SET domain protein 2 -0.0232579
RPLP0 ribosomal protein, large, P0 -0.0230306
FTL ferritin, light polypeptide -0.0229735
RPL5 ribosomal protein L5 -0.0229344
SMC4 structural maintenance of chromosomes 4 -0.0225142
MORF4L2 mortality factor 4 like 2 -0.0220467
RPL18 ribosomal protein L18 -0.0214011
SCFD1 sec1 family domain containing 1 -0.0213517
PHIP pleckstrin homology domain interacting protein -0.0210918
RPS4X ribosomal protein S4, X-linked -0.0210852
RPS27 ribosomal protein S27 -0.0209235
RPL19 ribosomal protein L19 -0.0207014
RPS29 ribosomal protein S29 -0.0203609
ACTG1 actin gamma 1 -0.0203032
HMGB2 high mobility group box 2 -0.0202886
SEPTIN7 septin 7 -0.0202235
RPS21 ribosomal protein S21 -0.0202201
ATF6 activating transcription factor 6 -0.0201754
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0201622
CALR calreticulin -0.0201278
HMGA1 high mobility group AT-hook 1 -0.0198446
ANXA2 annexin A2 -0.0197462
NACA nascent polypeptide-associated complex alpha subunit -0.019697
RPL32 ribosomal protein L32 -0.0196892
S100A10 S100 calcium binding protein A10 -0.0196412
RPL11 ribosomal protein L11 -0.0196241
RPL28 ribosomal protein L28 -0.0193935
IARS1 isoleucyl-tRNA synthetase 1 -0.0193284
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0193256
ZFR zinc finger RNA binding protein -0.0192643
RPL30 ribosomal protein L30 -0.0191946
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0191929
RAD21 RAD21 homolog (S. pombe) -0.0191104
ESF1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) -0.0188695
GPHN gephyrin -0.0187586
EIF1 eukaryotic translation initiation factor 1 -0.0185164
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0183585
PCBP2 poly(rC) binding protein 2 -0.0179108
AGO3 argonaute RISC catalytic component 3 -0.0176348
IFRD1 interferon-related developmental regulator 1 -0.0174439
TUBA1B tubulin, alpha 1b -0.0174183
RBM39 RNA binding motif protein 39 -0.0173911
PRRC2B proline-rich coiled-coil 2B -0.0173296
SCFD2 sec1 family domain containing 2 -0.0170953
CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 -0.0170647
NME2 NME/NM23 nucleoside diphosphate kinase 2 -0.0168824
RPL38 ribosomal protein L38 -0.0166864
RACK1 receptor for activated C kinase 1 -0.0165559
KIF4A kinesin family member 4A -0.0165299
CDK12 cyclin-dependent kinase 12 -0.016476
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.016466
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0163779
EEF1G eukaryotic translation elongation factor 1 gamma -0.0162034
NCAPG2 non-SMC condensin II complex, subunit G2 -0.0161963
PPME1 protein phosphatase methylesterase 1 -0.0161814
MTF2 metal response element binding transcription factor 2 -0.0160782
DPM1 dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit -0.0160011
SLC39A9 solute carrier family 39, member 9 -0.0159481
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0158118
ANLN anillin, actin binding protein -0.0156819
LDHB lactate dehydrogenase B -0.0156572
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB -0.0156514
TPX2 TPX2, microtubule-associated -0.015592
EIF5B eukaryotic translation initiation factor 5B -0.0151692
SLC25A3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 -0.015146