Vandetanib_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Vandetanib perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Vandetanib_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.235388
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0629392
HELZ helicase with zinc finger 0.0625597
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0610451
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0587553
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0540454
AKAP12 A kinase (PRKA) anchor protein 12 0.0494054
WDR45B WD repeat domain 45B 0.0474809
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0414628
XPO1 exportin 1 0.0410991
FAM13A family with sequence similarity 13, member A 0.0401299
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0388679
PCBP2 poly(rC) binding protein 2 0.0372982
ZNF292 zinc finger protein 292 0.037276
DTNA dystrobrevin, alpha 0.035941
ANXA2 annexin A2 0.0356226
UBA6 ubiquitin-like modifier activating enzyme 6 0.0346327
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0345394
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0341875
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.033674
PDIA3 protein disulfide isomerase family A, member 3 0.032904
PRRC2C proline-rich coiled-coil 2C 0.0328805
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0316214
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) 0.0309072
PICALM phosphatidylinositol binding clathrin assembly protein 0.030592
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0304431
RTN4 reticulon 4 0.02989
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0295164
RNF145 ring finger protein 145 0.0294182
SOS1 son of sevenless homolog 1 (Drosophila) 0.0293744
ARF4 ADP-ribosylation factor 4 0.0272248
GDF15 growth differentiation factor 15 0.0269291
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0268198
ZNF638 zinc finger protein 638 0.0268187
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 0.0266892
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0263363
DSCAM Down syndrome cell adhesion molecule 0.0257774
LIMCH1 LIM and calponin homology domains 1 0.0257589
EPS8 epidermal growth factor receptor pathway substrate 8 0.0257138
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0256566
PCM1 pericentriolar material 1 0.0253801
ARRDC3 arrestin domain containing 3 0.0251994
PGK1 phosphoglycerate kinase 1 0.0251336
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0250107
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0245611
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0244495
STARD4 StAR-related lipid transfer (START) domain containing 4 0.0243569
CLTC clathrin, heavy chain (Hc) 0.0240563
MINDY2 MINDY lysine 48 deubiquitinase 2 0.023888
NPEPPS aminopeptidase puromycin sensitive 0.023836
ANO6 anoctamin 6 0.0235678
HILPDA hypoxia inducible lipid droplet-associated 0.0233707
TCF12 transcription factor 12 0.0232501
ESYT2 extended synaptotagmin-like protein 2 0.0232439
LPIN1 lipin 1 0.0226261
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0225139
MED13 mediator complex subunit 13 0.0224644
PTGES3 prostaglandin E synthase 3 (cytosolic) 0.0224539
PLAT plasminogen activator, tissue 0.0224523
EIF3E eukaryotic translation initiation factor 3, subunit E 0.022421
RNF111 ring finger protein 111 0.0222741
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0222307
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0222059
KDM3A lysine (K)-specific demethylase 3A 0.0221981
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0221863
SAFB scaffold attachment factor B 0.0221361
BCAT1 branched chain amino-acid transaminase 1, cytosolic 0.022125
PCCA propionyl CoA carboxylase, alpha polypeptide 0.0221201
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0220331
ENAH enabled homolog (Drosophila) 0.0220013
RAB6A RAB6A, member RAS oncogene family 0.0218699
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 0.0218344
NAA25 N(alpha)-acetyltransferase 25, NatB auxiliary subunit 0.0216915
TENT2 terminal nucleotidyltransferase 2 0.0216616
S100A6 S100 calcium binding protein A6 0.0215931
N4BP2L2 NEDD4 binding protein 2-like 2 0.02151
CHD1 chromodomain helicase DNA binding protein 1 0.0214079
CEP350 centrosomal protein 350kDa 0.0213724
LONP2 lon peptidase 2, peroxisomal 0.0213059
GNPDA1 glucosamine-6-phosphate deaminase 1 0.02094
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0209311
PTEN phosphatase and tensin homolog 0.0207641
BRWD1 bromodomain and WD repeat domain containing 1 0.0206954
GLG1 golgi glycoprotein 1 0.0205435
MDM4 MDM4, p53 regulator 0.020165
WDR43 WD repeat domain 43 0.020154
TNRC6A trinucleotide repeat containing 6A 0.0200538
BHLHE40 basic helix-loop-helix family, member e40 0.0200527
ARID4A AT rich interactive domain 4A (RBP1-like) 0.0197267
POTEF POTE ankyrin domain family, member F 0.0196579
BBX bobby sox homolog (Drosophila) 0.0195471
DIAPH2 diaphanous-related formin 2 0.0195419
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 0.019356
PSD3 pleckstrin and Sec7 domain containing 3 0.0193147
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0192904
SCARB2 scavenger receptor class B, member 2 0.0192581
TNIP1 TNFAIP3 interacting protein 1 0.019128
DDX39B DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 0.0191116
EPHA3 EPH receptor A3 0.019042
WDR3 WD repeat domain 3 0.0189696

decreased expression

Symbol Name Standardized Value
LSAMP limbic system-associated membrane protein -0.150904
VCL vinculin -0.0843318
NRG1 neuregulin 1 -0.0811221
PTPRD protein tyrosine phosphatase, receptor type, D -0.0798639
BCAS3 breast carcinoma amplified sequence 3 -0.0689123
IGF2 insulin-like growth factor 2 -0.0686912
EXT1 exostosin glycosyltransferase 1 -0.0678465
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0656714
TPST1 tyrosylprotein sulfotransferase 1 -0.0655409
TLE4 transducin-like enhancer of split 4 -0.0625273
SYT1 synaptotagmin I -0.0611033
KLHL13 kelch-like family member 13 -0.0603936
NALF1 NALCN channel auxiliary factor 1 -0.0598031
SP100 SP100 nuclear antigen -0.0583107
RPL23 ribosomal protein L23 -0.0579426
RNF213 ring finger protein 213 -0.057794
THSD4 thrombospondin, type I, domain containing 4 -0.0510462
PTPRK protein tyrosine phosphatase, receptor type, K -0.0499264
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 -0.0493554
TMSB10 thymosin beta 10 -0.0476347
LRFN5 leucine rich repeat and fibronectin type III domain containing 5 -0.0476199
MEIS2 Meis homeobox 2 -0.046968
FMN1 formin 1 -0.0455424
FRMD4A FERM domain containing 4A -0.0440961
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0438926
RPLP1 ribosomal protein, large, P1 -0.0438269
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0431556
RPS19 ribosomal protein S19 -0.0415348
UNC5C unc-5 homolog C (C. elegans) -0.0412728
RIGI RNA sensor RIG-I -0.0409172
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0397034
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0395902
FAM107B family with sequence similarity 107, member B -0.0381226
RPL19 ribosomal protein L19 -0.0376442
ZNF804A zinc finger protein 804A -0.0374673
HAND2 heart and neural crest derivatives expressed 2 -0.0372994
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) -0.0370093
DNAH14 dynein, axonemal, heavy chain 14 -0.0370089
NCAM2 neural cell adhesion molecule 2 -0.0365759
GRK5 G protein-coupled receptor kinase 5 -0.0351638
COL1A1 collagen, type I, alpha 1 -0.0341741
RPL35A ribosomal protein L35a -0.033799
FNDC3A fibronectin type III domain containing 3A -0.0337798
ANTXR1 anthrax toxin receptor 1 -0.0334757
RPS6 ribosomal protein S6 -0.0328951
BICD1 bicaudal D homolog 1 (Drosophila) -0.0324695
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0322726
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 -0.0322598
TRIB2 tribbles pseudokinase 2 -0.0320334
MYO9A myosin IXA -0.0320006
RPS27 ribosomal protein S27 -0.0318075
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.0316818
AOPEP aminopeptidase O (putative) -0.0316539
IFI16 interferon, gamma-inducible protein 16 -0.031475
PDZRN3 PDZ domain containing ring finger 3 -0.0310218
GREM2 gremlin 2, DAN family BMP antagonist -0.0309974
PDE10A phosphodiesterase 10A -0.0309288
MBD5 methyl-CpG binding domain protein 5 -0.0303814
SLIT2 slit homolog 2 (Drosophila) -0.0295991
NRP1 neuropilin 1 -0.0295948
KLF6 Kruppel-like factor 6 -0.0295291
COL4A5 collagen, type IV, alpha 5 -0.0294383
MX2 MX dynamin-like GTPase 2 -0.0292803
TRIO trio Rho guanine nucleotide exchange factor -0.028927
RPL36 ribosomal protein L36 -0.0286996
RAB7A RAB7A, member RAS oncogene family -0.028689
ARID5B AT rich interactive domain 5B (MRF1-like) -0.0286824
DNM3 dynamin 3 -0.0285069
PRKCA protein kinase C, alpha -0.0283068
EGFR epidermal growth factor receptor -0.0275745
PTPRE protein tyrosine phosphatase, receptor type, E -0.0275387
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0275107
HLA-B major histocompatibility complex, class I, B -0.0274936
CUL1 cullin 1 -0.0274069
NME2 NME/NM23 nucleoside diphosphate kinase 2 -0.0269239
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 -0.0265227
GLCCI1 glucocorticoid induced 1 -0.026472
PDE4D phosphodiesterase 4D, cAMP-specific -0.026082
TRIP12 thyroid hormone receptor interactor 12 -0.0257473
COL4A2 collagen, type IV, alpha 2 -0.0256564
IER3 immediate early response 3 -0.025426
NACA nascent polypeptide-associated complex alpha subunit -0.0253905
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0250796
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0250462
RBM39 RNA binding motif protein 39 -0.0247812
EGR1 early growth response 1 -0.0247466
AEBP2 AE binding protein 2 -0.0246148
SLC38A2 solute carrier family 38, member 2 -0.0244794
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B -0.0244486
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0242973
RPTOR regulatory associated protein of MTOR, complex 1 -0.0242339
LIMA1 LIM domain and actin binding 1 -0.0241988
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0241536
CALD1 caldesmon 1 -0.0241488
COL3A1 collagen, type III, alpha 1 -0.0240798
TNFRSF19 tumor necrosis factor receptor superfamily, member 19 -0.0239113
IRS1 insulin receptor substrate 1 -0.023584
SOX5 SRY (sex determining region Y)-box 5 -0.0235289
STXBP4 syntaxin binding protein 4 -0.0235233
TTC17 tetratricopeptide repeat domain 17 -0.0234219