Verapamil_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Verapamil perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Verapamil_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FAM13A family with sequence similarity 13, member A 0.132195
MT2A metallothionein 2A 0.0936524
NAMPT nicotinamide phosphoribosyltransferase 0.0925095
GRAMD1B GRAM domain containing 1B 0.0877534
RICTOR RPTOR independent companion of MTOR, complex 2 0.0669204
TPD52 tumor protein D52 0.0550267
RNF145 ring finger protein 145 0.0522831
PUM2 pumilio RNA-binding family member 2 0.0497699
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0463771
KDM6A lysine (K)-specific demethylase 6A 0.0431081
GPC6 glypican 6 0.0429415
BRWD3 bromodomain and WD repeat domain containing 3 0.0414844
HELZ helicase with zinc finger 0.0410166
TSC22D2 TSC22 domain family, member 2 0.040819
NGLY1 N-glycanase 1 0.0399666
UBA6 ubiquitin-like modifier activating enzyme 6 0.0398576
PGK1 phosphoglycerate kinase 1 0.0395482
PDE4D phosphodiesterase 4D, cAMP-specific 0.039128
GSK3B glycogen synthase kinase 3 beta 0.0384108
USP3 ubiquitin specific peptidase 3 0.0377259
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0373107
ATP13A3 ATPase type 13A3 0.0371259
NUP58 nucleoporin 58 0.0362534
NPTN neuroplastin 0.0355732
H1-0 H1.0 linker histone 0.0349832
TOP1 topoisomerase (DNA) I 0.0347489
RUNX1 runt-related transcription factor 1 0.0341562
ELL2 elongation factor, RNA polymerase II, 2 0.0329909
FNDC3B fibronectin type III domain containing 3B 0.0327864
WAC WW domain containing adaptor with coiled-coil 0.0325113
NCKAP1 NCK-associated protein 1 0.0321116
ERRFI1 ERBB receptor feedback inhibitor 1 0.0317083
TFG TRK-fused gene 0.0315115
RAP1B RAP1B, member of RAS oncogene family 0.0313008
ZNF292 zinc finger protein 292 0.0310784
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0304844
ECT2 epithelial cell transforming 2 0.0302271
DTNA dystrobrevin, alpha 0.0295777
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0294926
LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial) 0.0294235
KCMF1 potassium channel modulatory factor 1 0.0288774
RNMT RNA (guanine-7-) methyltransferase 0.0281024
CPEB2 cytoplasmic polyadenylation element binding protein 2 0.0276263
TMEM165 transmembrane protein 165 0.0275887
KDM3A lysine (K)-specific demethylase 3A 0.0270838
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0270483
KMT2E lysine (K)-specific methyltransferase 2E 0.0266847
ADAM17 ADAM metallopeptidase domain 17 0.0266835
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 0.0257147
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0255318
MXI1 MAX interactor 1, dimerization protein 0.0249591
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0248192
ANKRD12 ankyrin repeat domain 12 0.0239582
STRN3 striatin, calmodulin binding protein 3 0.0239165
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0238093
ZFAND6 zinc finger, AN1-type domain 6 0.0237797
CDKN2A cyclin-dependent kinase inhibitor 2A 0.0234243
ZMYM2 zinc finger, MYM-type 2 0.0233571
SETD5 SET domain containing 5 0.0233401
UVRAG UV radiation resistance associated 0.023063
CAMTA1 calmodulin binding transcription activator 1 0.0228185
ARL8B ADP-ribosylation factor-like 8B 0.0224606
PDE8A phosphodiesterase 8A 0.0222517
PPP3R1 protein phosphatase 3, regulatory subunit B, alpha 0.0220482
CDC73 cell division cycle 73 0.0218584
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.021667
CYLD cylindromatosis (turban tumor syndrome) 0.0211926
SPPL3 signal peptide peptidase like 3 0.0210625
TM9SF2 transmembrane 9 superfamily member 2 0.021043
ATG14 autophagy related 14 0.02097
ARRDC3 arrestin domain containing 3 0.0205927
QKI QKI, KH domain containing, RNA binding 0.0205021
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 0.020345
TBK1 TANK-binding kinase 1 0.0202736
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa 0.0202409
BIRC2 baculoviral IAP repeat containing 2 0.0196183
CSNK1A1 casein kinase 1, alpha 1 0.0192189
PTBP2 polypyrimidine tract binding protein 2 0.0191966
SLMAP sarcolemma associated protein 0.0189259
GPAT3 glycerol-3-phosphate acyltransferase 3 0.0187901
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0185424
SEPTIN10 septin 10 0.0185258
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.018458
USP9X ubiquitin specific peptidase 9, X-linked 0.0183017
PNISR PNN-interacting serine/arginine-rich protein 0.0182565
RAB6A RAB6A, member RAS oncogene family 0.0180495
VEZT vezatin, adherens junctions transmembrane protein 0.0179301
WTAP Wilms tumor 1 associated protein 0.0178565
PIAS1 protein inhibitor of activated STAT, 1 0.0176613
BRWD1 bromodomain and WD repeat domain containing 1 0.0174133
ANXA5 annexin A5 0.0173948
UBE2E1 ubiquitin-conjugating enzyme E2E 1 0.017332
ENO1 enolase 1, (alpha) 0.0173226
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform 0.0171387
MEF2A myocyte enhancer factor 2A 0.0170749
RTN4 reticulon 4 0.0170531
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.0170235
FOXJ3 forkhead box J3 0.0169979
VEGFC vascular endothelial growth factor C 0.0169713
MIMS1 mitochondrial inner membrane scaffold 1 0.016892

decreased expression

Symbol Name Standardized Value
EGFR epidermal growth factor receptor -0.416919
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.205568
TXNRD1 thioredoxin reductase 1 -0.129991
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.112382
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.106019
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.086826
EGR1 early growth response 1 -0.0795594
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0789812
LOC112694756 uncharaterized LOC112694756 -0.0720768
NDRG1 N-myc downstream regulated 1 -0.0684284
MCL1 myeloid cell leukemia 1 -0.0671573
PKM pyruvate kinase, muscle -0.0665411
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0642131
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0628038
LDHA lactate dehydrogenase A -0.0621001
TMSB10 thymosin beta 10 -0.0606794
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0563082
LAMC2 laminin, gamma 2 -0.0545522
INTS6 integrator complex subunit 6 -0.0527
ACTG1 actin gamma 1 -0.0524697
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0522934
ASPH aspartate beta-hydroxylase -0.0522181
GOLGB1 golgin B1 -0.0478206
HDLBP high density lipoprotein binding protein -0.046154
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0453215
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0448917
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0442883
DOCK5 dedicator of cytokinesis 5 -0.0417845
AKAP9 A kinase (PRKA) anchor protein 9 -0.0416941
MYO1E myosin IE -0.0403428
SOD2 superoxide dismutase 2, mitochondrial -0.0399785
PLEC plectin -0.0397243
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0395197
PATJ PATJ crumbs cell polarity complex component -0.0395082
ZNF638 zinc finger protein 638 -0.0382554
ZMYND8 zinc finger, MYND-type containing 8 -0.0376617
TPT1 tumor protein, translationally-controlled 1 -0.0372418
CAV1 caveolin 1, caveolae protein, 22kDa -0.0369229
AHNAK AHNAK nucleoprotein -0.0363437
AKR1C1 aldo-keto reductase family 1, member C1 -0.0362835
UBC ubiquitin C -0.036154
S100A10 S100 calcium binding protein A10 -0.0358074
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.035457
PDLIM5 PDZ and LIM domain 5 -0.0350747
RNF213 ring finger protein 213 -0.0348417
CST3 cystatin C -0.0347956
KRT8 keratin 8, type II -0.0345893
HLA-B major histocompatibility complex, class I, B -0.0340833
NSUN6 NOP2/Sun domain family, member 6 -0.0340206
TBC1D22A TBC1 domain family, member 22A -0.0337463
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0329635
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0328793
EXT1 exostosin glycosyltransferase 1 -0.0328262
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0326337
KRT18 keratin 18, type I -0.0325804
LMO7 LIM domain 7 -0.0323115
DSCAM Down syndrome cell adhesion molecule -0.0320893
CCND1 cyclin D1 -0.0320341
SDC4 syndecan 4 -0.0317304
MGST1 microsomal glutathione S-transferase 1 -0.0311211
MAML3 mastermind-like 3 (Drosophila) -0.0310893
SLTM SAFB-like, transcription modulator -0.0309838
SRRM2 serine/arginine repetitive matrix 2 -0.0309567
IGFBP3 insulin-like growth factor binding protein 3 -0.0309429
GCLC glutamate-cysteine ligase, catalytic subunit -0.0305337
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0304114
KRT7 keratin 7, type II -0.029819
RPL35A ribosomal protein L35a -0.0295625
CTBP2 C-terminal binding protein 2 -0.0288189
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0286822
OSMR oncostatin M receptor -0.0285328
DOCK1 dedicator of cytokinesis 1 -0.0284168
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0283873
SCEL sciellin -0.0278266
FTH1 ferritin, heavy polypeptide 1 -0.0271524
HMGA1 high mobility group AT-hook 1 -0.0269674
CAV2 caveolin 2 -0.0261608
CANX calnexin -0.0260236
AKAP13 A kinase (PRKA) anchor protein 13 -0.0259355
EFNA5 ephrin-A5 -0.0258962
FRY furry homolog (Drosophila) -0.0258657
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0256574
BTG1 B-cell translocation gene 1, anti-proliferative -0.0254533
ST14 suppression of tumorigenicity 14 (colon carcinoma) -0.0252006
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) -0.0250945
KIAA1217 KIAA1217 -0.0250002
COPA coatomer protein complex, subunit alpha -0.0248163
AGR2 anterior gradient 2 -0.0246438
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0246348
CYFIP1 cytoplasmic FMR1 interacting protein 1 -0.0243721
TMCO3 transmembrane and coiled-coil domains 3 -0.024364
ANXA1 annexin A1 -0.024145
LPP LIM domain containing preferred translocation partner in lipoma -0.0240588
EHBP1 EH domain binding protein 1 -0.0237508
KLF5 Kruppel-like factor 5 (intestinal) -0.0233649
TNS3 tensin 3 -0.0232659
ABLIM1 actin binding LIM protein 1 -0.0232303
EYA2 EYA transcriptional coactivator and phosphatase 2 -0.0231225
B2M beta-2-microglobulin -0.0231202
PERP PERP, TP53 apoptosis effector -0.0230203