Verapamil_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Verapamil perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Verapamil_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTL ferritin, light polypeptide 0.172706
PTMA prothymosin, alpha 0.119039
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.108855
NAMPT nicotinamide phosphoribosyltransferase 0.108399
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.101327
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0987942
TOP2A topoisomerase (DNA) II alpha 170kDa 0.081825
PGK1 phosphoglycerate kinase 1 0.0793211
ENO1 enolase 1, (alpha) 0.077907
MT2A metallothionein 2A 0.0775903
LAMB3 laminin, beta 3 0.0772787
RPS3 ribosomal protein S3 0.0771271
ASPH aspartate beta-hydroxylase 0.0736915
FAM13A family with sequence similarity 13, member A 0.0724434
ZFP36L1 ZFP36 ring finger protein-like 1 0.0695295
ANXA2 annexin A2 0.0624349
RACK1 receptor for activated C kinase 1 0.0606548
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0599971
TM4SF1 transmembrane 4 L six family member 1 0.0575728
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0573103
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.055177
G0S2 G0/G1 switch 2 0.0539623
ACTG1 actin gamma 1 0.0539285
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0510864
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0492795
RPL12 ribosomal protein L12 0.0482638
SQSTM1 sequestosome 1 0.0473592
RPL4 ribosomal protein L4 0.0465884
RAD21 RAD21 homolog (S. pombe) 0.0441557
LAMC2 laminin, gamma 2 0.0441124
FXR1 fragile X mental retardation, autosomal homolog 1 0.0396963
NCKAP1 NCK-associated protein 1 0.0396154
PLAUR plasminogen activator, urokinase receptor 0.039241
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0389737
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0387618
EIF1 eukaryotic translation initiation factor 1 0.0378389
RPS12 ribosomal protein S12 0.0369616
RPL32 ribosomal protein L32 0.0366735
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0366241
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0365119
RPS19 ribosomal protein S19 0.0364888
H1-4 H1.4 linker histone, cluster member 0.0357409
BHLHE40 basic helix-loop-helix family, member e40 0.0352198
RPS2 ribosomal protein S2 0.0348038
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0345474
TMEM263 transmembrane protein 263 0.0343945
RPL37A ribosomal protein L37a 0.0342125
RPS29 ribosomal protein S29 0.0336585
ELL2 elongation factor, RNA polymerase II, 2 0.0335395
RPS8 ribosomal protein S8 0.0324184
IFI6 interferon, alpha-inducible protein 6 0.0323325
RPL6 ribosomal protein L6 0.0323153
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0322436
B2M beta-2-microglobulin 0.0322379
H1-0 H1.0 linker histone 0.0319135
FHIT fragile histidine triad 0.031876
KLF6 Kruppel-like factor 6 0.031744
S100A10 S100 calcium binding protein A10 0.0312985
PAPOLA poly(A) polymerase alpha 0.0311783
TMSB10 thymosin beta 10 0.0307911
HSPA8 heat shock 70kDa protein 8 0.0306314
HMGB2 high mobility group box 2 0.0305593
HLA-A major histocompatibility complex, class I, A 0.0304736
AREG amphiregulin 0.0302416
GPX4 glutathione peroxidase 4 0.0287405
ZNF292 zinc finger protein 292 0.0283263
TPT1 tumor protein, translationally-controlled 1 0.0281819
FAM162A family with sequence similarity 162, member A 0.0281719
SSBP2 single-stranded DNA binding protein 2 0.0279768
MDK midkine (neurite growth-promoting factor 2) 0.0279097
RPS6 ribosomal protein S6 0.0275677
S100A11 S100 calcium binding protein A11 0.0275377
ERRFI1 ERBB receptor feedback inhibitor 1 0.0269538
ARRDC3 arrestin domain containing 3 0.0266038
UGCG UDP-glucose ceramide glucosyltransferase 0.0265518
USP3 ubiquitin specific peptidase 3 0.0265047
TNIP1 TNFAIP3 interacting protein 1 0.0262431
RNF145 ring finger protein 145 0.0259109
RPL19 ribosomal protein L19 0.0254322
WBP11 WW domain binding protein 11 0.025124
DSPP dentin sialophosphoprotein 0.0250821
UBA6 ubiquitin-like modifier activating enzyme 6 0.0246765
MSMO1 methylsterol monooxygenase 1 0.0244979
FOSL1 FOS-like antigen 1 0.0243677
RPS23 ribosomal protein S23 0.0242509
RPLP0 ribosomal protein, large, P0 0.0241946
RPL18 ribosomal protein L18 0.0239319
KDM3A lysine (K)-specific demethylase 3A 0.023858
ARL5B ADP-ribosylation factor-like 5B 0.0238112
TKT transketolase 0.0233795
NAP1L1 nucleosome assembly protein 1-like 1 0.0233336
RPL27 ribosomal protein L27 0.0230982
ISG15 ISG15 ubiquitin-like modifier 0.0230286
MKI67 marker of proliferation Ki-67 0.0230224
RPS17 ribosomal protein S17 0.0230169
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0228853
G3BP2 GTPase activating protein (SH3 domain) binding protein 2 0.0228569
RHEB Ras homolog enriched in brain 0.0226551
IFITM3 interferon induced transmembrane protein 3 0.0226102
CORO1C coronin, actin binding protein, 1C 0.0225817

decreased expression

Symbol Name Standardized Value
POTEF POTE ankyrin domain family, member F -0.169867
ERBIN erbb2 interacting protein -0.0820364
EXT1 exostosin glycosyltransferase 1 -0.0789681
VEGFA vascular endothelial growth factor A -0.0746016
FN1 fibronectin 1 -0.0684408
FBXO32 F-box protein 32 -0.059261
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0557541
SAMD4A sterile alpha motif domain containing 4A -0.0551633
IGFBP3 insulin-like growth factor binding protein 3 -0.0534507
NDRG1 N-myc downstream regulated 1 -0.0507256
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0491176
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0487878
LIMCH1 LIM and calponin homology domains 1 -0.0484012
ADAM9 ADAM metallopeptidase domain 9 -0.0454434
LOC112694756 uncharaterized LOC112694756 -0.0445519
RPL35A ribosomal protein L35a -0.0442356
DTNA dystrobrevin, alpha -0.0437307
HMGA1 high mobility group AT-hook 1 -0.0436186
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0424051
ITCH itchy E3 ubiquitin protein ligase -0.0420068
JUP junction plakoglobin -0.0418648
FAM3C family with sequence similarity 3, member C -0.0397541
ZNF207 zinc finger protein 207 -0.0387277
MYO1E myosin IE -0.0385962
CCND1 cyclin D1 -0.0377243
KDM2A lysine (K)-specific demethylase 2A -0.0373511
FNBP4 formin binding protein 4 -0.0357892
AKAP13 A kinase (PRKA) anchor protein 13 -0.0353795
UBE2H ubiquitin-conjugating enzyme E2H -0.035107
LPP LIM domain containing preferred translocation partner in lipoma -0.0347915
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.034577
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0345322
COPA coatomer protein complex, subunit alpha -0.0344855
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0343831
AKAP9 A kinase (PRKA) anchor protein 9 -0.0337892
RBM25 RNA binding motif protein 25 -0.0327317
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2 -0.0325154
RAB7A RAB7A, member RAS oncogene family -0.0322614
CDCP1 CUB domain containing protein 1 -0.0321829
FBXO34 F-box protein 34 -0.03188
RAB2A RAB2A, member RAS oncogene family -0.0311318
OCLN occludin -0.0308432
GRB10 growth factor receptor-bound protein 10 -0.0304396
ACBD3 acyl-CoA binding domain containing 3 -0.0298513
NF1 neurofibromin 1 -0.0295381
PKM pyruvate kinase, muscle -0.0289856
CERT1 ceramide transporter 1 -0.0289828
MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3 -0.0285909
JMJD1C jumonji domain containing 1C -0.0284847
TJP1 tight junction protein 1 -0.0282979
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0278967
PLSCR1 phospholipid scramblase 1 -0.0277208
CTSD cathepsin D -0.0275705
TMEM165 transmembrane protein 165 -0.0275306
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0274224
EFNA5 ephrin-A5 -0.0268605
OSMR oncostatin M receptor -0.0268312
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0268141
ARF4 ADP-ribosylation factor 4 -0.0266993
DSCAM Down syndrome cell adhesion molecule -0.0264839
PLEC plectin -0.0264211
F3 coagulation factor III (thromboplastin, tissue factor) -0.0262677
ARF1 ADP-ribosylation factor 1 -0.026192
TPM4 tropomyosin 4 -0.0259798
PTK2 protein tyrosine kinase 2 -0.0258406
ZFAND3 zinc finger, AN1-type domain 3 -0.0256995
TAPBP TAP binding protein (tapasin) -0.0256785
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1 -0.0254638
EGR1 early growth response 1 -0.0254217
TXNRD1 thioredoxin reductase 1 -0.0253272
SEC31A SEC31 homolog A (S. cerevisiae) -0.0252942
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0251732
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0250886
KMT2C lysine (K)-specific methyltransferase 2C -0.025002
GOLGB1 golgin B1 -0.0250019
RBM47 RNA binding motif protein 47 -0.0249789
FNIP1 folliculin interacting protein 1 -0.0249781
ANKRD17 ankyrin repeat domain 17 -0.0249723
CANX calnexin -0.0249191
FBXO11 F-box protein 11 -0.0244721
AFF4 AF4/FMR2 family, member 4 -0.0243903
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0243532
GGNBP2 gametogenetin binding protein 2 -0.0241971
BTBD9 BTB (POZ) domain containing 9 -0.0240256
PGBD5 piggyBac transposable element derived 5 -0.0239414
SVIL supervillin -0.0238233
SPINT2 serine peptidase inhibitor, Kunitz type, 2 -0.0237351
FGD4 FYVE, RhoGEF and PH domain containing 4 -0.0236239
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0236203
CSNK1A1 casein kinase 1, alpha 1 -0.0235276
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0234713
RALA v-ral simian leukemia viral oncogene homolog A (ras related) -0.0233924
MYO6 myosin VI -0.023238
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0231887
ATXN1 ataxin 1 -0.023045
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB -0.0227657
ZNF148 zinc finger protein 148 -0.0226615
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0224369
WNK1 WNK lysine deficient protein kinase 1 -0.0222323
TRIP12 thyroid hormone receptor interactor 12 -0.022229