Verteporfin_NCI-H596 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Verteporfin perturbation in NCI-H596 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Verteporfin_NCI-H596 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NALF1 NALCN channel auxiliary factor 1 0.108465
PDE4D phosphodiesterase 4D, cAMP-specific 0.0940814
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0891248
EFNA5 ephrin-A5 0.0846018
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0753381
LIMCH1 LIM and calponin homology domains 1 0.0688794
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0648711
SYT1 synaptotagmin I 0.0638311
FOXK2 forkhead box K2 0.0606531
PSD3 pleckstrin and Sec7 domain containing 3 0.0596673
CANX calnexin 0.0590257
TAS2R14 taste receptor, type 2, member 14 0.0586246
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0578904
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0566983
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0554161
FAM117B family with sequence similarity 117, member B 0.0550632
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0547176
LIMS1 LIM and senescent cell antigen-like domains 1 0.0542402
BASP1 brain abundant, membrane attached signal protein 1 0.0534902
RPLP1 ribosomal protein, large, P1 0.0524917
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0512667
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0508399
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 0.0504819
CDH13 cadherin 13 0.0501759
IGFBP3 insulin-like growth factor binding protein 3 0.0488436
ACIN1 apoptotic chromatin condensation inducer 1 0.0488063
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0473238
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0462991
MBD5 methyl-CpG binding domain protein 5 0.0459011
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0447665
OSMR oncostatin M receptor 0.0440318
PEG10 paternally expressed 10 0.0435904
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0433142
PDE10A phosphodiesterase 10A 0.0431385
FAT1 FAT atypical cadherin 1 0.0421889
HMGA2 high mobility group AT-hook 2 0.0418315
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.0416327
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0408148
TBC1D22A TBC1 domain family, member 22A 0.0407659
TPR translocated promoter region, nuclear basket protein 0.040177
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0400904
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0399406
ANKRD12 ankyrin repeat domain 12 0.0395816
RPL37A ribosomal protein L37a 0.0393327
BPTF bromodomain PHD finger transcription factor 0.0383041
RPS8 ribosomal protein S8 0.037689
VCL vinculin 0.0374144
SPTBN1 spectrin, beta, non-erythrocytic 1 0.037392
RLF rearranged L-myc fusion 0.0371955
ZNF292 zinc finger protein 292 0.0366486
ZBTB20 zinc finger and BTB domain containing 20 0.035766
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0348821
SBF2 SET binding factor 2 0.034744
NCOR1 nuclear receptor corepressor 1 0.0345665
PHF21A PHD finger protein 21A 0.0345356
NAV1 neuron navigator 1 0.0345112
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0342973
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0341701
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0338911
FLNB filamin B, beta 0.0336923
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0334459
ZNF148 zinc finger protein 148 0.0321899
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.0319619
LOC112694756 uncharaterized LOC112694756 0.0313679
GNAS GNAS complex locus 0.031061
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0310609
RAB10 RAB10, member RAS oncogene family 0.0308908
PRELID2 PRELI domain containing 2 0.030852
GRB10 growth factor receptor-bound protein 10 0.030705
RPS19 ribosomal protein S19 0.0304989
CD2AP CD2-associated protein 0.0303348
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0299634
MYOF myoferlin 0.0292497
PGK1 phosphoglycerate kinase 1 0.0286825
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0282783
RPS27A ribosomal protein S27a 0.0282219
RPS3 ribosomal protein S3 0.0275234
SMG6 SMG6 nonsense mediated mRNA decay factor 0.0269431
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0263474
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0261143
TENM3 teneurin transmembrane protein 3 0.0258683
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0255052
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0254066
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0252952
MBNL2 muscleblind-like splicing regulator 2 0.0250056
RPL26 ribosomal protein L26 0.0249337
FN1 fibronectin 1 0.023943
MACF1 microtubule-actin crosslinking factor 1 0.0229559
ENO1 enolase 1, (alpha) 0.0227106
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0223033
RPLP0 ribosomal protein, large, P0 0.0222867
ZC3H11A zinc finger CCCH-type containing 11A 0.0218883
ERRFI1 ERBB receptor feedback inhibitor 1 0.0215946
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0211218
NPAS2 neuronal PAS domain protein 2 0.021086
PTBP3 polypyrimidine tract binding protein 3 0.020902
KDM4C lysine (K)-specific demethylase 4C 0.0207068
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0206147
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0204671
AFF4 AF4/FMR2 family, member 4 0.0204596

decreased expression

Symbol Name Standardized Value
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.154527
PTK2 protein tyrosine kinase 2 -0.0932124
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0773251
VIM vimentin -0.0715029
NDRG1 N-myc downstream regulated 1 -0.0675595
OGA O-GlcNAcase -0.0593092
ANKRD11 ankyrin repeat domain 11 -0.05645
GOLGA4 golgin A4 -0.0540924
TPM3 tropomyosin 3 -0.0518866
FMNL2 formin-like 2 -0.0509947
LAMB3 laminin, beta 3 -0.0502564
STC1 stanniocalcin 1 -0.0487722
B2M beta-2-microglobulin -0.0480107
SLC38A1 solute carrier family 38, member 1 -0.0466918
FNDC3B fibronectin type III domain containing 3B -0.0463603
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0452053
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0426759
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0423586
KMT2E lysine (K)-specific methyltransferase 2E -0.0417749
GLS2 glutaminase 2 (liver, mitochondrial) -0.0416435
CAPZB capping protein (actin filament) muscle Z-line, beta -0.0414048
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0407163
MEF2A myocyte enhancer factor 2A -0.040491
NCOA3 nuclear receptor coactivator 3 -0.0404862
SKP1 S-phase kinase-associated protein 1 -0.0398103
RPS16 ribosomal protein S16 -0.0394205
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0389738
SPAG9 sperm associated antigen 9 -0.0389698
LOXL2 lysyl oxidase-like 2 -0.0387491
AHNAK AHNAK nucleoprotein -0.038634
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0374271
H3-3B H3.3 histone B -0.0374074
ITGA6 integrin, alpha 6 -0.0372396
EZR ezrin -0.0372123
RBM25 RNA binding motif protein 25 -0.0368675
TPI1 triosephosphate isomerase 1 -0.0367855
FOSL1 FOS-like antigen 1 -0.0359136
SEPTIN2 septin 2 -0.03524
KDM6A lysine (K)-specific demethylase 6A -0.0349384
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0344596
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0342159
IER3 immediate early response 3 -0.0339915
RAB6A RAB6A, member RAS oncogene family -0.0339861
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0335335
WDPCP WD repeat containing planar cell polarity effector -0.0335072
USP8 ubiquitin specific peptidase 8 -0.0328238
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0327478
SMYD3 SET and MYND domain containing 3 -0.0327136
EP400 E1A binding protein p400 -0.0325636
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 -0.0324774
CAMTA1 calmodulin binding transcription activator 1 -0.0323657
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0320104
STK24 serine/threonine kinase 24 -0.0317604
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0310363
OXSR1 oxidative stress responsive 1 -0.0309947
TOP1 topoisomerase (DNA) I -0.0307637
MARCHF6 membrane associated ring-CH-type finger 6 -0.0307296
RPL35A ribosomal protein L35a -0.0306932
HELZ helicase with zinc finger -0.0306668
SND1 staphylococcal nuclease and tudor domain containing 1 -0.0303201
WWTR1 WW domain containing transcription regulator 1 -0.0295915
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0291814
GCLC glutamate-cysteine ligase, catalytic subunit -0.028962
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0288697
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0286138
ZMYND8 zinc finger, MYND-type containing 8 -0.0285856
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0279641
RNF145 ring finger protein 145 -0.0276259
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0276191
GGNBP2 gametogenetin binding protein 2 -0.0273563
RHEB Ras homolog enriched in brain -0.027056
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0269784
POTEF POTE ankyrin domain family, member F -0.0268051
GLG1 golgi glycoprotein 1 -0.0266269
MSN moesin -0.0265979
COPA coatomer protein complex, subunit alpha -0.0261744
RAB2A RAB2A, member RAS oncogene family -0.0261043
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.026066
VMP1 vacuole membrane protein 1 -0.0258315
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0257992
HOOK2 hook microtubule-tethering protein 2 -0.0256845
NPEPPS aminopeptidase puromycin sensitive -0.0256445
ERBIN erbb2 interacting protein -0.0254989
ELF2 E74-like factor 2 (ets domain transcription factor) -0.0253876
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0253251
IPO7 importin 7 -0.0253068
MYO6 myosin VI -0.0251491
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0247299
UVRAG UV radiation resistance associated -0.0246256
FBXO34 F-box protein 34 -0.0244844
GARS1 glycyl-tRNA synthetase 1 -0.0244324
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0243448
DOCK5 dedicator of cytokinesis 5 -0.0240331
RAD21 RAD21 homolog (S. pombe) -0.0236283
PTPRJ protein tyrosine phosphatase, receptor type, J -0.0233792
RAP1B RAP1B, member of RAS oncogene family -0.0232823
PNRC1 proline-rich nuclear receptor coactivator 1 -0.022778
TMSB10 thymosin beta 10 -0.0227121
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0226811
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0226216