Vinblastine (sulfate)_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Vinblastine (sulfate) perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Vinblastine (sulfate)_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SMC4 structural maintenance of chromosomes 4 0.0729545
PCBP2 poly(rC) binding protein 2 0.0610326
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0595204
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0500024
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0497179
TMEM41B transmembrane protein 41B 0.047405
ZNF292 zinc finger protein 292 0.0463573
CNRIP1 cannabinoid receptor interacting protein 1 0.0454954
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 0.0434421
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0424385
VMP1 vacuole membrane protein 1 0.0419146
NEBL nebulette 0.0418813
CELF2 CUGBP, Elav-like family member 2 0.0410466
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0405744
ZSWIM6 zinc finger, SWIM-type containing 6 0.0405141
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0404438
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0399999
PCM1 pericentriolar material 1 0.0399772
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0395006
YAP1 Yes-associated protein 1 0.0380764
XPO1 exportin 1 0.0377407
CCNL1 cyclin L1 0.0375264
NLGN1 neuroligin 1 0.0359863
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0337959
MED13L mediator complex subunit 13-like 0.0326925
AKAP9 A kinase (PRKA) anchor protein 9 0.0325697
RBM25 RNA binding motif protein 25 0.0322595
KTN1 kinectin 1 (kinesin receptor) 0.0304332
RRM2 ribonucleotide reductase M2 0.0301662
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0295154
CHD1 chromodomain helicase DNA binding protein 1 0.0288227
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0287814
SEPTIN7 septin 7 0.028651
NEK7 NIMA-related kinase 7 0.0285437
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0284075
NIPBL Nipped-B homolog (Drosophila) 0.0274205
CCDC88A coiled-coil domain containing 88A 0.0274038
EDN1 endothelin 1 0.0272926
BIRC6 baculoviral IAP repeat containing 6 0.027215
TRA2B transformer 2 beta homolog (Drosophila) 0.0269116
WWOX WW domain containing oxidoreductase 0.0267571
SEC31A SEC31 homolog A (S. cerevisiae) 0.0267482
FXR1 fragile X mental retardation, autosomal homolog 1 0.0261576
ZNF638 zinc finger protein 638 0.0259458
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.025511
TBC1D5 TBC1 domain family, member 5 0.0255092
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0254594
TENM3 teneurin transmembrane protein 3 0.0254405
NKTR natural killer cell triggering receptor 0.0254092
ANKRD28 ankyrin repeat domain 28 0.0254021
FBXO11 F-box protein 11 0.0251755
EPHA6 EPH receptor A6 0.0250709
EDARADD EDAR-associated death domain 0.0249646
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1 0.024768
ECT2 epithelial cell transforming 2 0.0246162
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 0.0245024
ATAD2 ATPase family, AAA domain containing 2 0.0233753
OSBPL8 oxysterol binding protein-like 8 0.0231658
TBK1 TANK-binding kinase 1 0.0228698
TPR translocated promoter region, nuclear basket protein 0.0228092
CPOX coproporphyrinogen oxidase 0.0227469
RAPGEF6 Rap guanine nucleotide exchange factor (GEF) 6 0.0227239
TJP1 tight junction protein 1 0.0226803
EXOC6B exocyst complex component 6B 0.0226535
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0226452
RSF1 remodeling and spacing factor 1 0.0226325
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.022329
CIP2A cellular inhibitor of PP2A 0.0223042
KMT2E lysine (K)-specific methyltransferase 2E 0.0222354
LRP6 low density lipoprotein receptor-related protein 6 0.0221361
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 0.0218562
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.0218196
RAD51B RAD51 paralog B 0.0217448
CENPF centromere protein F, 350/400kDa 0.0216397
ADGRG6 adhesion G protein-coupled receptor G6 0.021494
PRRC2C proline-rich coiled-coil 2C 0.0214815
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0214736
MAP3K14 mitogen-activated protein kinase kinase kinase 14 0.021437
PDE4D phosphodiesterase 4D, cAMP-specific 0.0214343
ARL15 ADP-ribosylation factor-like 15 0.0212031
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0210209
PEG10 paternally expressed 10 0.020832
ZBTB20 zinc finger and BTB domain containing 20 0.0204577
NF1 neurofibromin 1 0.0202559
MIS18BP1 MIS18 binding protein 1 0.0202495
SRSF11 serine/arginine-rich splicing factor 11 0.0202413
TFG TRK-fused gene 0.0202331
TPI1 triosephosphate isomerase 1 0.0201666
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0199831
PTMA prothymosin, alpha 0.0199702
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0196409
PRKCI protein kinase C, iota 0.019355
SRRM1 serine/arginine repetitive matrix 1 0.019348
RBM39 RNA binding motif protein 39 0.0192597
FAM13B family with sequence similarity 13, member B 0.019081
SETD5 SET domain containing 5 0.0190186
USP34 ubiquitin specific peptidase 34 0.0186653
TNPO1 transportin 1 0.0186593
SMC3 structural maintenance of chromosomes 3 0.0186428
TTC3 tetratricopeptide repeat domain 3 0.018558

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.176276
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.157499
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 -0.150623
VIM vimentin -0.123125
YBX3 Y box binding protein 3 -0.120629
AREG amphiregulin -0.10897
AKAP12 A kinase (PRKA) anchor protein 12 -0.0919302
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0850533
HMGA2 high mobility group AT-hook 2 -0.0820825
MMP12 matrix metallopeptidase 12 -0.0760612
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0745301
TM4SF1 transmembrane 4 L six family member 1 -0.0733925
ANXA1 annexin A1 -0.0624828
PRDX1 peroxiredoxin 1 -0.0612607
RPL23 ribosomal protein L23 -0.0571105
BCHE butyrylcholinesterase -0.0565422
TXNRD1 thioredoxin reductase 1 -0.0551433
RASAL2 RAS protein activator like 2 -0.0548314
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.0528188
EHBP1 EH domain binding protein 1 -0.050976
RPL26 ribosomal protein L26 -0.0455287
HSPA8 heat shock 70kDa protein 8 -0.0447744
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0425378
AHNAK AHNAK nucleoprotein -0.041641
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0413063
EZR ezrin -0.0407761
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.039215
SLC38A2 solute carrier family 38, member 2 -0.0386885
RPS12 ribosomal protein S12 -0.0381885
ACTG1 actin gamma 1 -0.0379278
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.0371104
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0368659
CLDN1 claudin 1 -0.0364276
RPL35A ribosomal protein L35a -0.0345211
FTL ferritin, light polypeptide -0.0338507
CALD1 caldesmon 1 -0.0335088
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) -0.0334668
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 -0.0324422
MACF1 microtubule-actin crosslinking factor 1 -0.03243
GJA1 gap junction protein, alpha 1, 43kDa -0.0321638
S100A6 S100 calcium binding protein A6 -0.0320579
RTN4 reticulon 4 -0.0319651
EGFR epidermal growth factor receptor -0.031894
RPL12 ribosomal protein L12 -0.0304259
ZNF804A zinc finger protein 804A -0.0303572
BIRC3 baculoviral IAP repeat containing 3 -0.0290188
RPS6 ribosomal protein S6 -0.0286694
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0283454
RPS3 ribosomal protein S3 -0.0269676
ASPH aspartate beta-hydroxylase -0.026648
CUBN cubilin (intrinsic factor-cobalamin receptor) -0.0256644
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0256154
S100A11 S100 calcium binding protein A11 -0.025353
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0250955
CAMK2D calcium/calmodulin-dependent protein kinase II delta -0.0240059
PARD6B par-6 family cell polarity regulator beta -0.0236096
TUBB tubulin, beta class I -0.023589
RPL3 ribosomal protein L3 -0.0234071
LMO7 LIM domain 7 -0.0232056
RPS27A ribosomal protein S27a -0.0229753
INTS6 integrator complex subunit 6 -0.0228583
TUBA1B tubulin, alpha 1b -0.0223125
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle -0.0222809
MAP1B microtubule-associated protein 1B -0.0221308
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0219933
CCT5 chaperonin containing TCP1, subunit 5 (epsilon) -0.0208585
KLF6 Kruppel-like factor 6 -0.0206955
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0201789
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0197456
RPS8 ribosomal protein S8 -0.0193427
FKBP4 FK506 binding protein 4, 59kDa -0.019284
L3MBTL4 l(3)mbt-like 4 (Drosophila) -0.0191982
RPL34 ribosomal protein L34 -0.0190032
RPS17 ribosomal protein S17 -0.0188977
SLCO1B3 solute carrier organic anion transporter family, member 1B3 -0.0185245
NABP1 nucleic acid binding protein 1 -0.0185174
DST dystonin -0.0184603
USP53 ubiquitin specific peptidase 53 -0.0179905
CCL20 chemokine (C-C motif) ligand 20 -0.0178823
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0176755
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0175887
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) -0.0174208
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0174019
RPLP0 ribosomal protein, large, P0 -0.0173908
RPL4 ribosomal protein L4 -0.0171884
CUX1 cut-like homeobox 1 -0.0171088
CDV3 CDV3 homolog (mouse) -0.0170959
STIP1 stress-induced phosphoprotein 1 -0.0170637
MYPN myopalladin -0.016963
RPS14 ribosomal protein S14 -0.0169258
RAB10 RAB10, member RAS oncogene family -0.0167871
NHSL1 NHS-like 1 -0.0166646
RPS24 ribosomal protein S24 -0.0166122
THSD4 thrombospondin, type I, domain containing 4 -0.0165011
EPHA5 EPH receptor A5 -0.0164867
RPS2 ribosomal protein S2 -0.0164657
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0164079
IFIH1 interferon induced with helicase C domain 1 -0.0163102
SLC39A11 solute carrier family 39, member 11 -0.016216
RPL19 ribosomal protein L19 -0.0160805