Vinblastine (sulfate)_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Vinblastine (sulfate) perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Vinblastine (sulfate)_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.30409
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.165426
GOLGA4 golgin A4 0.0901459
PTMA prothymosin, alpha 0.0751854
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0694372
CALR calreticulin 0.059647
RNF145 ring finger protein 145 0.0572319
PDIA3 protein disulfide isomerase family A, member 3 0.0535579
FAM13A family with sequence similarity 13, member A 0.0533011
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0487542
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0484568
FNDC3B fibronectin type III domain containing 3B 0.040809
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0398641
PDIA4 protein disulfide isomerase family A, member 4 0.0385252
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0382918
CENPF centromere protein F, 350/400kDa 0.0381018
ESYT2 extended synaptotagmin-like protein 2 0.0378076
OGA O-GlcNAcase 0.0378011
COPA coatomer protein complex, subunit alpha 0.0376731
FTH1 ferritin, heavy polypeptide 1 0.037666
MON2 MON2 homolog (S. cerevisiae) 0.0371439
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0368356
ZNF292 zinc finger protein 292 0.0365705
ZFAND3 zinc finger, AN1-type domain 3 0.0351054
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0345162
AKAP9 A kinase (PRKA) anchor protein 9 0.0340613
MED13L mediator complex subunit 13-like 0.0340586
KMT2E lysine (K)-specific methyltransferase 2E 0.0330781
CANX calnexin 0.0327217
TTC3 tetratricopeptide repeat domain 3 0.0316491
WAC WW domain containing adaptor with coiled-coil 0.0314387
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0304786
NEBL nebulette 0.030334
NUCB2 nucleobindin 2 0.030196
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0296543
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0293455
KTN1 kinectin 1 (kinesin receptor) 0.0291734
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase 0.0287271
TFG TRK-fused gene 0.0280286
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0279042
EREG epiregulin 0.0278329
ZFC3H1 zinc finger, C3H1-type containing 0.0277751
SEC24D SEC24 family member D 0.0277522
RBM39 RNA binding motif protein 39 0.0276578
PCM1 pericentriolar material 1 0.0273471
SRP54 signal recognition particle 54kDa 0.0265304
PTEN phosphatase and tensin homolog 0.0263217
ESRP1 epithelial splicing regulatory protein 1 0.0262277
COPB1 coatomer protein complex, subunit beta 1 0.0261531
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.0260267
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0256541
HELZ helicase with zinc finger 0.0255869
RAB1A RAB1A, member RAS oncogene family 0.0254653
ANKRD11 ankyrin repeat domain 11 0.0252133
TM9SF3 transmembrane 9 superfamily member 3 0.025118
EXOC1 exocyst complex component 1 0.024975
TMF1 TATA element modulatory factor 1 0.02492
GOLGB1 golgin B1 0.0248395
SETD5 SET domain containing 5 0.0238082
NUP58 nucleoporin 58 0.0237126
VEGFA vascular endothelial growth factor A 0.0236447
KDM6A lysine (K)-specific demethylase 6A 0.0236348
UBA6 ubiquitin-like modifier activating enzyme 6 0.0234355
MXI1 MAX interactor 1, dimerization protein 0.0232959
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0232536
SEC23A Sec23 homolog A (S. cerevisiae) 0.0232307
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.023213
CEMIP2 cell migration inducing hyaluronidase 2 0.0231317
KDM3A lysine (K)-specific demethylase 3A 0.0230165
SEC31A SEC31 homolog A (S. cerevisiae) 0.0229431
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.0229175
SUCO SUN domain containing ossification factor 0.0228529
RELCH RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing 0.0227543
AP3B1 adaptor-related protein complex 3, beta 1 subunit 0.0227527
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0227343
NEK7 NIMA-related kinase 7 0.0227
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 0.022655
MED13 mediator complex subunit 13 0.0222925
NBAS neuroblastoma amplified sequence 0.022198
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) 0.0219814
TXNIP thioredoxin interacting protein 0.0219631
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0219303
RAB6A RAB6A, member RAS oncogene family 0.0217829
EHF ets homologous factor 0.0217755
LMAN1 lectin, mannose-binding, 1 0.0215672
PDIA6 protein disulfide isomerase family A, member 6 0.0211601
USP3 ubiquitin specific peptidase 3 0.0210216
USP6NL USP6 N-terminal like 0.0209315
IARS1 isoleucyl-tRNA synthetase 1 0.0208687
WDR45B WD repeat domain 45B 0.0204811
SENP6 SUMO1/sentrin specific peptidase 6 0.0204769
SEL1L sel-1 suppressor of lin-12-like (C. elegans) 0.0204215
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.020275
NCOR1 nuclear receptor corepressor 1 0.0201864
UBR2 ubiquitin protein ligase E3 component n-recognin 2 0.0201532
TPR translocated promoter region, nuclear basket protein 0.0200759
ZNF654 zinc finger protein 654 0.0200031
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0199741
ACBD3 acyl-CoA binding domain containing 3 0.0197867
RREB1 ras responsive element binding protein 1 0.0197817

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.265714
NPSR1 neuropeptide S receptor 1 -0.173974
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.162541
TPT1 tumor protein, translationally-controlled 1 -0.148947
S100A6 S100 calcium binding protein A6 -0.119423
ACTG1 actin gamma 1 -0.116634
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.115201
VCL vinculin -0.099644
FLNB filamin B, beta -0.0788268
TPM4 tropomyosin 4 -0.07791
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0743276
MYO1E myosin IE -0.0722114
ANXA2 annexin A2 -0.0703169
NALF1 NALCN channel auxiliary factor 1 -0.0678326
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0649443
SLC35F3 solute carrier family 35, member F3 -0.062573
AHNAK AHNAK nucleoprotein -0.0625028
ONECUT3 one cut homeobox 3 -0.0614969
PTPRK protein tyrosine phosphatase, receptor type, K -0.0613729
ACTN4 actinin, alpha 4 -0.0588987
KLF6 Kruppel-like factor 6 -0.0564421
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0557858
FTL ferritin, light polypeptide -0.0534665
HMGA1 high mobility group AT-hook 1 -0.052048
SOX4 SRY (sex determining region Y)-box 4 -0.051618
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0515654
ANTXR2 anthrax toxin receptor 2 -0.0514754
F3 coagulation factor III (thromboplastin, tissue factor) -0.0511979
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0506153
PIGR polymeric immunoglobulin receptor -0.0473926
RPL35A ribosomal protein L35a -0.046649
LAMC2 laminin, gamma 2 -0.0464031
GREB1L growth regulation by estrogen in breast cancer-like -0.0449178
EXT1 exostosin glycosyltransferase 1 -0.0447046
SMYD3 SET and MYND domain containing 3 -0.0446425
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0445738
ALCAM activated leukocyte cell adhesion molecule -0.0444591
LPP LIM domain containing preferred translocation partner in lipoma -0.044034
RPL26 ribosomal protein L26 -0.0437162
FRMD5 FERM domain containing 5 -0.0435399
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0432777
PDLIM5 PDZ and LIM domain 5 -0.043007
S100A10 S100 calcium binding protein A10 -0.0424497
PSD3 pleckstrin and Sec7 domain containing 3 -0.0416797
IER3 immediate early response 3 -0.0414979
RPS19 ribosomal protein S19 -0.0414167
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0411439
RPL31 ribosomal protein L31 -0.0400165
ASPH aspartate beta-hydroxylase -0.0399127
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0396192
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0374729
PATJ PATJ crumbs cell polarity complex component -0.0372905
AKAP12 A kinase (PRKA) anchor protein 12 -0.0372646
MAML3 mastermind-like 3 (Drosophila) -0.0368599
KRT19 keratin 19, type I -0.0366796
SAMD4A sterile alpha motif domain containing 4A -0.0364456
SVIL supervillin -0.0363222
RPL34 ribosomal protein L34 -0.0359751
EZR ezrin -0.0355205
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0344269
AREG amphiregulin -0.0343177
ANXA3 annexin A3 -0.0339129
RPL9 ribosomal protein L9 -0.0336744
POTEF POTE ankyrin domain family, member F -0.0336319
OCIAD2 OCIA domain containing 2 -0.0334436
SLC38A2 solute carrier family 38, member 2 -0.0333066
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0329873
RPS12 ribosomal protein S12 -0.0329237
CCND1 cyclin D1 -0.0329132
KLK10 kallikrein-related peptidase 10 -0.0327295
MYH9 myosin, heavy chain 9, non-muscle -0.0324079
LAMB3 laminin, beta 3 -0.0319505
RPLP2 ribosomal protein, large, P2 -0.0318009
MYL12B myosin, light chain 12B, regulatory -0.0315276
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle -0.031395
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.0310546
PTPRB protein tyrosine phosphatase, receptor type, B -0.0308621
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0307952
FHIT fragile histidine triad -0.0306627
MTAP methylthioadenosine phosphorylase -0.0304296
RPS3 ribosomal protein S3 -0.0301012
CD59 CD59 molecule, complement regulatory protein -0.0294321
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 -0.0290475
PALLD palladin, cytoskeletal associated protein -0.0289413
S100A11 S100 calcium binding protein A11 -0.0288605
MUC17 mucin 17, cell surface associated -0.0288074
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.028721
MBNL1 muscleblind-like splicing regulator 1 -0.0286492
KRT8 keratin 8, type II -0.0284786
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0282494
RPL23 ribosomal protein L23 -0.0282381
EGR1 early growth response 1 -0.0281821
TFF1 trefoil factor 1 -0.0281632
ZBTB20 zinc finger and BTB domain containing 20 -0.0278832
PERP PERP, TP53 apoptosis effector -0.027761
RPS24 ribosomal protein S24 -0.0277049
RPL37A ribosomal protein L37a -0.0268852
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 -0.0265008
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough -0.0264376
SH3D19 SH3 domain containing 19 -0.0261348