Vinblastine (sulfate)_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Vinblastine (sulfate) perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Vinblastine (sulfate)_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VIM vimentin 0.136108
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0889794
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0686366
CADM2 cell adhesion molecule 2 0.0667092
DST dystonin 0.0633277
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0606714
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0501821
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0482643
PRELID2 PRELI domain containing 2 0.0449419
RAD51B RAD51 paralog B 0.040148
SDCCAG8 serologically defined colon cancer antigen 8 0.0391374
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0388409
GCLM glutamate-cysteine ligase, modifier subunit 0.0380169
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0350777
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0341043
SETX senataxin 0.033239
PDIA3 protein disulfide isomerase family A, member 3 0.0327261
DPYD dihydropyrimidine dehydrogenase 0.0318835
CANX calnexin 0.0317718
SLCO1B3 solute carrier organic anion transporter family, member 1B3 0.030537
IFI6 interferon, alpha-inducible protein 6 0.030392
ENO1 enolase 1, (alpha) 0.030163
BICD1 bicaudal D homolog 1 (Drosophila) 0.0299061
EMP1 epithelial membrane protein 1 0.0295686
BZW1 basic leucine zipper and W2 domains 1 0.0292747
SP100 SP100 nuclear antigen 0.0281671
CFAP299 cilia and flagella associated protein 299 0.0279599
BIRC3 baculoviral IAP repeat containing 3 0.0272026
DPYSL2 dihydropyrimidinase-like 2 0.0270183
EXOC4 exocyst complex component 4 0.025248
COL6A3 collagen, type VI, alpha 3 0.0250965
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0250226
CUBN cubilin (intrinsic factor-cobalamin receptor) 0.0248727
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0232805
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0226933
PLSCR1 phospholipid scramblase 1 0.0224163
CD44 CD44 molecule (Indian blood group) 0.021687
ITGB3BP integrin beta 3 binding protein (beta3-endonexin) 0.0213902
TTC3 tetratricopeptide repeat domain 3 0.0213632
RIGI RNA sensor RIG-I 0.021191
MB21D2 Mab-21 domain containing 2 0.0211393
PMP22 peripheral myelin protein 22 0.0209876
WWOX WW domain containing oxidoreductase 0.0208212
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0204782
ZBTB38 zinc finger and BTB domain containing 38 0.0203632
ZSWIM6 zinc finger, SWIM-type containing 6 0.0202719
SAMD4A sterile alpha motif domain containing 4A 0.0202076
SMYD3 SET and MYND domain containing 3 0.0200957
CALR calreticulin 0.0199066
FERMT1 fermitin family member 1 0.0197932
PSD3 pleckstrin and Sec7 domain containing 3 0.0196661
BPTF bromodomain PHD finger transcription factor 0.0195761
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0195035
NCEH1 neutral cholesterol ester hydrolase 1 0.0194626
HLA-B major histocompatibility complex, class I, B 0.0194218
HM13 histocompatibility (minor) 13 0.0190898
CEP128 centrosomal protein 128kDa 0.0189892
ZDHHC14 zinc finger, DHHC-type containing 14 0.018671
MACF1 microtubule-actin crosslinking factor 1 0.0186441
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0186009
DDAH1 dimethylarginine dimethylaminohydrolase 1 0.0185848
NPAS2 neuronal PAS domain protein 2 0.0178491
SMC4 structural maintenance of chromosomes 4 0.017405
TGM2 transglutaminase 2 0.0172963
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0172797
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0172546
PDE10A phosphodiesterase 10A 0.0164406
PNPT1 polyribonucleotide nucleotidyltransferase 1 0.0161632
ATM ATM serine/threonine kinase 0.0161202
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0161172
VCL vinculin 0.0160834
CCDC190 coiled-coil domain containing 190 0.0159156
APOLD1 apolipoprotein L domain containing 1 0.0158419
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.0156438
DIAPH3 diaphanous-related formin 3 0.0155646
SVIL supervillin 0.0154239
MYBL1 v-myb avian myeloblastosis viral oncogene homolog-like 1 0.0152659
CFLAR CASP8 and FADD-like apoptosis regulator 0.0151996
WDR27 WD repeat domain 27 0.0151251
GOLGB1 golgin B1 0.0150639
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.015001
RGS4 regulator of G-protein signaling 4 0.0149808
CACNG8 calcium channel, voltage-dependent, gamma subunit 8 0.0149782
PMEPA1 prostate transmembrane protein, androgen induced 1 0.014899
RRM2 ribonucleotide reductase M2 0.0148528
KPNB1 karyopherin (importin) beta 1 0.0147584
CCDC18 coiled-coil domain containing 18 0.014708
DOCK1 dedicator of cytokinesis 1 0.0145543
PRKCE protein kinase C, epsilon 0.0144859
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa 0.0143592
HELLS helicase, lymphoid-specific 0.0142504
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough 0.0142119
PDIA4 protein disulfide isomerase family A, member 4 0.0141955
PARP9 poly (ADP-ribose) polymerase family, member 9 0.0141476
INTS6 integrator complex subunit 6 0.0140061
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0138483
HERC6 HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 0.013731
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) 0.0136151
RSPH3 radial spoke 3 homolog (Chlamydomonas) 0.0136097
KRT18 keratin 18, type I 0.0134141

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.253273
TMSB10 thymosin beta 10 -0.198304
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.134842
MT2A metallothionein 2A -0.11054
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0936044
RAI1 retinoic acid induced 1 -0.0913388
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0864138
APP amyloid beta (A4) precursor protein -0.0848802
TMSB4X thymosin beta 4, X-linked -0.0700492
KMT2E lysine (K)-specific methyltransferase 2E -0.0666346
MT1X metallothionein 1X -0.0664291
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.06467
RPL23 ribosomal protein L23 -0.0641489
TM4SF1 transmembrane 4 L six family member 1 -0.0640924
FTL ferritin, light polypeptide -0.0615422
FMNL2 formin-like 2 -0.061347
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0597915
RPL35A ribosomal protein L35a -0.0568064
ARHGAP5 Rho GTPase activating protein 5 -0.0563393
PTMA prothymosin, alpha -0.0560169
CAPRIN2 caprin family member 2 -0.0541589
EZR ezrin -0.0519916
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0519818
GARS1 glycyl-tRNA synthetase 1 -0.0517909
TXNIP thioredoxin interacting protein -0.0515589
WSB1 WD repeat and SOCS box containing 1 -0.0511048
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0508383
RAB27B RAB27B, member RAS oncogene family -0.050737
AHNAK AHNAK nucleoprotein -0.0501085
PRRC2C proline-rich coiled-coil 2C -0.0494092
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0493194
GSK3B glycogen synthase kinase 3 beta -0.0487426
TXNRD1 thioredoxin reductase 1 -0.0484069
RPL12 ribosomal protein L12 -0.0483305
PTK2 protein tyrosine kinase 2 -0.0480307
SRPK2 SRSF protein kinase 2 -0.0475331
ZNF292 zinc finger protein 292 -0.0469061
KLF6 Kruppel-like factor 6 -0.0461833
BIRC6 baculoviral IAP repeat containing 6 -0.0461695
NAMPT nicotinamide phosphoribosyltransferase -0.0457137
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0443194
NPEPPS aminopeptidase puromycin sensitive -0.0442148
RAB7A RAB7A, member RAS oncogene family -0.043602
RPS19 ribosomal protein S19 -0.0432829
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.043056
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0428212
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0422194
SPAG9 sperm associated antigen 9 -0.0414685
PUM2 pumilio RNA-binding family member 2 -0.0414101
CELF1 CUGBP, Elav-like family member 1 -0.0412626
NCOR1 nuclear receptor corepressor 1 -0.0408389
KMT2C lysine (K)-specific methyltransferase 2C -0.0407034
SBF2 SET binding factor 2 -0.0402608
RLF rearranged L-myc fusion -0.0401098
RBM39 RNA binding motif protein 39 -0.0398591
USP36 ubiquitin specific peptidase 36 -0.039694
ZMYND8 zinc finger, MYND-type containing 8 -0.0391945
KDM3A lysine (K)-specific demethylase 3A -0.0391728
EHBP1 EH domain binding protein 1 -0.0382742
EREG epiregulin -0.0379574
RPL26 ribosomal protein L26 -0.0378486
TPT1 tumor protein, translationally-controlled 1 -0.0367289
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0366503
TOP1 topoisomerase (DNA) I -0.0361276
AMBRA1 autophagy/beclin-1 regulator 1 -0.0359382
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0356735
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0351751
PGK1 phosphoglycerate kinase 1 -0.0349631
SLC38A2 solute carrier family 38, member 2 -0.0346612
POTEF POTE ankyrin domain family, member F -0.0344338
CCNL1 cyclin L1 -0.034324
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0342477
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0342353
PTPRF protein tyrosine phosphatase, receptor type, F -0.0340948
RPS24 ribosomal protein S24 -0.0339385
WDR45B WD repeat domain 45B -0.0339032
RPS23 ribosomal protein S23 -0.0338133
ANXA1 annexin A1 -0.0337504
EEF2 eukaryotic translation elongation factor 2 -0.03373
MATR3 matrin 3 -0.0334108
STRN3 striatin, calmodulin binding protein 3 -0.0333621
TRA2A transformer 2 alpha homolog (Drosophila) -0.0324563
TSC22D2 TSC22 domain family, member 2 -0.0323367
RNF145 ring finger protein 145 -0.0311448
EIF4A1 eukaryotic translation initiation factor 4A1 -0.030676
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0306414
ESYT2 extended synaptotagmin-like protein 2 -0.0305323
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 -0.0303969
ADAM17 ADAM metallopeptidase domain 17 -0.0302385
RTN4 reticulon 4 -0.0302252
YBX3 Y box binding protein 3 -0.0301784
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0300552
ZFAND3 zinc finger, AN1-type domain 3 -0.0299748
BRWD1 bromodomain and WD repeat domain containing 1 -0.0298445
OGA O-GlcNAcase -0.029666
PTPRJ protein tyrosine phosphatase, receptor type, J -0.029358
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.029221
RPS21 ribosomal protein S21 -0.0291284
RB1CC1 RB1-inducible coiled-coil 1 -0.028833
ACTG1 actin gamma 1 -0.0282565