Vinblastine (sulfate)_SK-MEL-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Vinblastine (sulfate) perturbation in SK-MEL-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Vinblastine (sulfate)_SK-MEL-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.093198
AKAP12 A kinase (PRKA) anchor protein 12 0.0797189
FN1 fibronectin 1 0.0777114
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.0609149
SMYD3 SET and MYND domain containing 3 0.0428825
CXCL8 chemokine (C-X-C motif) ligand 8 0.0423621
TRIO trio Rho guanine nucleotide exchange factor 0.0418739
SAMD4A sterile alpha motif domain containing 4A 0.032113
PTPRG protein tyrosine phosphatase, receptor type, G 0.0315953
DST dystonin 0.030971
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0262758
GARS1 glycyl-tRNA synthetase 1 0.0256355
ANXA2 annexin A2 0.0254395
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.0251787
TRIM33 tripartite motif containing 33 0.025098
ANKRD11 ankyrin repeat domain 11 0.0248269
CDK6 cyclin-dependent kinase 6 0.0247966
LPP LIM domain containing preferred translocation partner in lipoma 0.0241723
PRELID2 PRELI domain containing 2 0.024128
ANKRD28 ankyrin repeat domain 28 0.0234864
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0225448
HELZ helicase with zinc finger 0.0224229
CHD1 chromodomain helicase DNA binding protein 1 0.0220513
CLIP4 CAP-GLY domain containing linker protein family, member 4 0.0220151
HHAT hedgehog acyltransferase 0.0219107
PDE4D phosphodiesterase 4D, cAMP-specific 0.0213836
QKI QKI, KH domain containing, RNA binding 0.0212658
COG5 component of oligomeric golgi complex 5 0.0211809
DLG1 discs, large homolog 1 (Drosophila) 0.0209635
EXT1 exostosin glycosyltransferase 1 0.0208756
OGA O-GlcNAcase 0.0205773
ZFAND3 zinc finger, AN1-type domain 3 0.0201958
ATXN1 ataxin 1 0.0197503
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0193514
ANK2 ankyrin 2, neuronal 0.0193142
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) 0.0181408
AUTS2 autism susceptibility candidate 2 0.0179918
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.0175835
EVI5 ecotropic viral integration site 5 0.0169621
CORO1C coronin, actin binding protein, 1C 0.0166046
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0165351
PTK2 protein tyrosine kinase 2 0.0165349
EFNA5 ephrin-A5 0.0163698
PDIA3 protein disulfide isomerase family A, member 3 0.016331
PPP2R3A protein phosphatase 2, regulatory subunit B'', alpha 0.0163303
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0163191
CTBP2 C-terminal binding protein 2 0.0163124
MIMS1 mitochondrial inner membrane scaffold 1 0.0162363
MATR3 matrin 3 0.0161821
IGFBP3 insulin-like growth factor binding protein 3 0.015933
OXSR1 oxidative stress responsive 1 0.0158773
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0157474
MAML3 mastermind-like 3 (Drosophila) 0.0157243
FMNL2 formin-like 2 0.0156014
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0155721
HDAC9 histone deacetylase 9 0.0155352
CD109 CD109 molecule 0.0155182
DENND1A DENN/MADD domain containing 1A 0.0154237
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.0153686
ERRFI1 ERBB receptor feedback inhibitor 1 0.0152894
IARS1 isoleucyl-tRNA synthetase 1 0.014935
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0148389
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0147324
MORF4L2 mortality factor 4 like 2 0.0146945
OLA1 Obg-like ATPase 1 0.0146906
NEGR1 neuronal growth regulator 1 0.0146101
TCF12 transcription factor 12 0.0145278
PSD3 pleckstrin and Sec7 domain containing 3 0.0144277
RNF145 ring finger protein 145 0.014424
USP3 ubiquitin specific peptidase 3 0.0143689
NF1 neurofibromin 1 0.0143112
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0142726
TFG TRK-fused gene 0.0141744
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0141136
AFF4 AF4/FMR2 family, member 4 0.0140816
STARD13 StAR-related lipid transfer (START) domain containing 13 0.0140475
ANKIB1 ankyrin repeat and IBR domain containing 1 0.0140296
MBNL1 muscleblind-like splicing regulator 1 0.0140252
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0139723
KPNA1 karyopherin alpha 1 (importin alpha 5) 0.0139087
CREB5 cAMP responsive element binding protein 5 0.0138677
WAC WW domain containing adaptor with coiled-coil 0.0138176
FRMD5 FERM domain containing 5 0.013799
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.0137936
PUM1 pumilio RNA-binding family member 1 0.0137848
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0137211
GRB10 growth factor receptor-bound protein 10 0.0137211
RAD51B RAD51 paralog B 0.0136433
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0136069
AP3S1 adaptor-related protein complex 3, sigma 1 subunit 0.013475
CELF2 CUGBP, Elav-like family member 2 0.0133879
ANKRD30B ankyrin repeat domain 30B 0.0133806
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.013368
RASAL2 RAS protein activator like 2 0.0133198
PICALM phosphatidylinositol binding clathrin assembly protein 0.0132599
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 0.0132291
TUBB tubulin, beta class I 0.0132075
USP24 ubiquitin specific peptidase 24 0.0131502
CANX calnexin 0.0131426
SEC31A SEC31 homolog A (S. cerevisiae) 0.0129664

decreased expression

Symbol Name Standardized Value
FMN1 formin 1 -0.142233
NLGN1 neuroligin 1 -0.122784
VIM vimentin -0.120174
RPS3 ribosomal protein S3 -0.107167
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.105004
ICAM1 intercellular adhesion molecule 1 -0.0835045
LSAMP limbic system-associated membrane protein -0.0833435
NRG3 neuregulin 3 -0.0807757
SQSTM1 sequestosome 1 -0.077921
MT2A metallothionein 2A -0.077319
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0644867
RPS12 ribosomal protein S12 -0.0620369
TMSB10 thymosin beta 10 -0.0527887
FRMD4A FERM domain containing 4A -0.0467274
RPS6 ribosomal protein S6 -0.0453001
NDRG1 N-myc downstream regulated 1 -0.0450633
RPS13 ribosomal protein S13 -0.0425569
TM4SF1 transmembrane 4 L six family member 1 -0.0399623
RPL37A ribosomal protein L37a -0.0379238
RPLP2 ribosomal protein, large, P2 -0.0376194
RPS8 ribosomal protein S8 -0.0370836
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0367144
EIF1 eukaryotic translation initiation factor 1 -0.0362046
IFI6 interferon, alpha-inducible protein 6 -0.0360894
PGK1 phosphoglycerate kinase 1 -0.035915
SFTPA2 surfactant protein A2 -0.0351959
B2M beta-2-microglobulin -0.03511
FTL ferritin, light polypeptide -0.0343757
HLA-B major histocompatibility complex, class I, B -0.0333059
RPL35A ribosomal protein L35a -0.0329629
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0325809
PMEL premelanosome protein -0.0325126
RPLP1 ribosomal protein, large, P1 -0.0322907
RPL9 ribosomal protein L9 -0.0317409
RPS23 ribosomal protein S23 -0.0314991
RPS27A ribosomal protein S27a -0.0312423
RPL38 ribosomal protein L38 -0.0310131
PKM pyruvate kinase, muscle -0.0304924
CTSB cathepsin B -0.0296898
RPL36A ribosomal protein L36a -0.0296487
S100A9 S100 calcium binding protein A9 -0.0290521
TENM1 teneurin transmembrane protein 1 -0.0289764
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0286927
RPS19 ribosomal protein S19 -0.0285629
RPL31 ribosomal protein L31 -0.0284146
RPL37 ribosomal protein L37 -0.028326
RPL19 ribosomal protein L19 -0.0282759
EEF2 eukaryotic translation elongation factor 2 -0.0281716
TPI1 triosephosphate isomerase 1 -0.0278169
RPS17 ribosomal protein S17 -0.0268721
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0268212
POTEF POTE ankyrin domain family, member F -0.026758
RPL32 ribosomal protein L32 -0.0259121
BCAS3 breast carcinoma amplified sequence 3 -0.025884
RPS2 ribosomal protein S2 -0.0253663
PTMA prothymosin, alpha -0.0251703
RPS24 ribosomal protein S24 -0.0250363
RACK1 receptor for activated C kinase 1 -0.0250146
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 -0.0244856
RPS29 ribosomal protein S29 -0.0244223
RPS14 ribosomal protein S14 -0.0238403
RPS16 ribosomal protein S16 -0.0232605
RPL36 ribosomal protein L36 -0.022959
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0229003
RPL11 ribosomal protein L11 -0.022823
CLTC clathrin, heavy chain (Hc) -0.0224996
ENO1 enolase 1, (alpha) -0.022369
RPL12 ribosomal protein L12 -0.021937
RPS21 ribosomal protein S21 -0.0218419
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0216072
GOLGA4 golgin A4 -0.021433
LDHA lactate dehydrogenase A -0.0214014
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.021285
LAMP2 lysosomal-associated membrane protein 2 -0.0212621
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -0.021235
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0211534
APOD apolipoprotein D -0.0210357
ANGPTL4 angiopoietin-like 4 -0.0205064
DCAF7 DDB1 and CUL4 associated factor 7 -0.0204764
TPT1 tumor protein, translationally-controlled 1 -0.0201885
IGFBP7 insulin-like growth factor binding protein 7 -0.0193618
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0193438
ADAR adenosine deaminase, RNA-specific -0.019327
RPL34 ribosomal protein L34 -0.0193264
LOC112694756 uncharaterized LOC112694756 -0.0192784
RAB7A RAB7A, member RAS oncogene family -0.0192742
PRRC2C proline-rich coiled-coil 2C -0.0188727
POLR2F polymerase (RNA) II (DNA directed) polypeptide F -0.0187487
FHIT fragile histidine triad -0.0185965
SET SET nuclear proto-oncogene -0.0185047
COX4I1 cytochrome c oxidase subunit IV isoform 1 -0.0184467
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0184333
RPL7 ribosomal protein L7 -0.018305
RPL7A ribosomal protein L7a -0.0182977
UBC ubiquitin C -0.0182504
LITAF lipopolysaccharide-induced TNF factor -0.0178497
RPL23 ribosomal protein L23 -0.017775
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.0177147
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0176966
LMNA lamin A/C -0.0175685