Vitamin K4_AsPC-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Vitamin K4 perturbation in AsPC-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Vitamin K4_AsPC-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PSD3 pleckstrin and Sec7 domain containing 3 0.0373879
GLS2 glutaminase 2 (liver, mitochondrial) 0.0256344
LHFPL2 lipoma HMGIC fusion partner-like 2 0.025526
TSC22D2 TSC22 domain family, member 2 0.0246184
CCNL1 cyclin L1 0.0242884
OGA O-GlcNAcase 0.023498
OSBPL3 oxysterol binding protein-like 3 0.0213022
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 0.0204485
NEK7 NIMA-related kinase 7 0.0202522
ITGA6 integrin, alpha 6 0.0195404
GDA guanine deaminase 0.0188713
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0183661
TRA2A transformer 2 alpha homolog (Drosophila) 0.0178025
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0170246
EPS8 epidermal growth factor receptor pathway substrate 8 0.0169227
TUFT1 tuftelin 1 0.0162245
FGD4 FYVE, RhoGEF and PH domain containing 4 0.0161133
HPCAL1 hippocalcin-like 1 0.0159904
ADAM9 ADAM metallopeptidase domain 9 0.015633
NCOA3 nuclear receptor coactivator 3 0.0148473
TOP1 topoisomerase (DNA) I 0.0144991
ARHGAP26 Rho GTPase activating protein 26 0.0143698
MYO6 myosin VI 0.0143073
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.013842
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0136575
PNISR PNN-interacting serine/arginine-rich protein 0.0136389
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0132765
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0129861
ADGRF1 adhesion G protein-coupled receptor F1 0.0129211
ANLN anillin, actin binding protein 0.0128391
PDGFA platelet-derived growth factor alpha polypeptide 0.0127891
PPARG peroxisome proliferator-activated receptor gamma 0.012558
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0125448
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0123317
CDH17 cadherin 17, LI cadherin (liver-intestine) 0.0122632
ANKRD10 ankyrin repeat domain 10 0.0121997
QKI QKI, KH domain containing, RNA binding 0.0116225
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0115663
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0113957
CERT1 ceramide transporter 1 0.0113229
RPL4 ribosomal protein L4 0.0112106
TRIO trio Rho guanine nucleotide exchange factor 0.0110537
BAIAP2L1 BAI1-associated protein 2-like 1 0.0108026
MKI67 marker of proliferation Ki-67 0.0107858
NPTN neuroplastin 0.0107479
VRK2 vaccinia related kinase 2 0.0106818
CAPRIN2 caprin family member 2 0.0106317
RBM39 RNA binding motif protein 39 0.0105797
KDM6A lysine (K)-specific demethylase 6A 0.0104016
NRIP1 nuclear receptor interacting protein 1 0.0103744
RSRC2 arginine/serine-rich coiled-coil 2 0.0103437
VCL vinculin 0.0103241
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0102485
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0101326
ACTG1 actin gamma 1 0.0100991
KCMF1 potassium channel modulatory factor 1 0.010098
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0100208
CLMN calmin (calponin-like, transmembrane) 0.0100194
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.00990049
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.00979279
EPCAM epithelial cell adhesion molecule 0.00972781
TMEM164 transmembrane protein 164 0.00963393
WDFY3 WD repeat and FYVE domain containing 3 0.00961158
MARCHF6 membrane associated ring-CH-type finger 6 0.0093857
PLEC plectin 0.00937311
MEMO1 mediator of cell motility 1 0.00936957
ECT2 epithelial cell transforming 2 0.00935355
COTL1 coactosin-like F-actin binding protein 1 0.00932013
SSBP2 single-stranded DNA binding protein 2 0.00915246
AUH AU RNA binding protein/enoyl-CoA hydratase 0.00913558
KLF7 Kruppel-like factor 7 (ubiquitous) 0.00908018
TENT2 terminal nucleotidyltransferase 2 0.00899125
TRIM36 tripartite motif containing 36 0.00898823
AFDN afadin, adherens junction formation factor 0.00896158
DIAPH3 diaphanous-related formin 3 0.00892388
TPD52 tumor protein D52 0.00881273
ARHGAP29 Rho GTPase activating protein 29 0.00864508
BHLHE40 basic helix-loop-helix family, member e40 0.00861654
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0085962
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.00857246
CNOT4 CCR4-NOT transcription complex, subunit 4 0.00856406
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.00854417
RYK receptor-like tyrosine kinase 0.00851632
NOS1AP nitric oxide synthase 1 (neuronal) adaptor protein 0.00851134
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 0.00850722
HIBADH 3-hydroxyisobutyrate dehydrogenase 0.0084641
PSME4 proteasome (prosome, macropain) activator subunit 4 0.00844647
MEF2A myocyte enhancer factor 2A 0.0084366
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.00843654
CD47 CD47 molecule 0.00840517
DENND3 DENN/MADD domain containing 3 0.00839818
ZNF292 zinc finger protein 292 0.00836197
AREG amphiregulin 0.00824545
ARGLU1 arginine and glutamate rich 1 0.00820768
NCAPG2 non-SMC condensin II complex, subunit G2 0.00813302
SDC4 syndecan 4 0.00809085
CENPF centromere protein F, 350/400kDa 0.0080639
OLA1 Obg-like ATPase 1 0.0080528
USP12 ubiquitin specific peptidase 12 0.0079183
YTHDC1 YTH domain containing 1 0.00787917

decreased expression

Symbol Name Standardized Value
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.193795
IGFBP3 insulin-like growth factor binding protein 3 -0.186354
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.170111
ARPC1B actin related protein 2/3 complex, subunit 1B, 41kDa -0.156492
DHRS9 dehydrogenase/reductase (SDR family) member 9 -0.126897
SACK1A scaffolding CK1 anchoring protein A -0.122088
TMSB10 thymosin beta 10 -0.110537
LAMB3 laminin, beta 3 -0.109476
TXNIP thioredoxin interacting protein -0.0985547
EGFR epidermal growth factor receptor -0.0920909
F3 coagulation factor III (thromboplastin, tissue factor) -0.0848754
FLNB filamin B, beta -0.0838993
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0791855
NDRG1 N-myc downstream regulated 1 -0.0778461
AKAP12 A kinase (PRKA) anchor protein 12 -0.0739074
VIM vimentin -0.0719462
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0708058
TXNRD1 thioredoxin reductase 1 -0.0664706
DOCK5 dedicator of cytokinesis 5 -0.0658968
EZR ezrin -0.0653855
SKAP2 src kinase associated phosphoprotein 2 -0.063378
KLK10 kallikrein-related peptidase 10 -0.06222
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0614335
ARPC1A actin related protein 2/3 complex, subunit 1A, 41kDa -0.0596986
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0558239
EFNA5 ephrin-A5 -0.0545173
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0539161
CLMP CXADR-like membrane protein -0.0538427
FTH1 ferritin, heavy polypeptide 1 -0.0538259
MAML2 mastermind-like 2 (Drosophila) -0.0523031
TPM4 tropomyosin 4 -0.0519129
UBC ubiquitin C -0.0515657
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0499728
ANTXR2 anthrax toxin receptor 2 -0.0494132
MXD1 MAX dimerization protein 1 -0.0491587
TPT1 tumor protein, translationally-controlled 1 -0.0484295
HMGA1 high mobility group AT-hook 1 -0.0476691
UBE2H ubiquitin-conjugating enzyme E2H -0.0474096
TM4SF1 transmembrane 4 L six family member 1 -0.0469448
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0468869
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0460333
TRRAP transformation/transcription domain-associated protein -0.0458926
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0449067
MCL1 myeloid cell leukemia 1 -0.0448755
GREB1L growth regulation by estrogen in breast cancer-like -0.0440443
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0439832
VCAN versican -0.0432939
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) -0.0432363
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0429073
THSD4 thrombospondin, type I, domain containing 4 -0.0428307
B2M beta-2-microglobulin -0.0425794
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0421913
MUC17 mucin 17, cell surface associated -0.0421513
FERMT1 fermitin family member 1 -0.0420461
LMO7 LIM domain 7 -0.0418866
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0413925
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0407382
SEC31A SEC31 homolog A (S. cerevisiae) -0.0404465
SMC3 structural maintenance of chromosomes 3 -0.0401715
RIOK3 RIO kinase 3 -0.0401426
CDCP1 CUB domain containing protein 1 -0.0400618
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.039074
SVIL supervillin -0.0390734
PPARD peroxisome proliferator-activated receptor delta -0.0385728
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0381709
FAM3C family with sequence similarity 3, member C -0.0380486
EGR1 early growth response 1 -0.0378914
PDE4D phosphodiesterase 4D, cAMP-specific -0.0378758
ARF4 ADP-ribosylation factor 4 -0.0377126
ZMYND8 zinc finger, MYND-type containing 8 -0.0376629
DIAPH1 diaphanous-related formin 1 -0.0375005
CALU calumenin -0.0366473
RRBP1 ribosome binding protein 1 -0.0361225
FTL ferritin, light polypeptide -0.0359773
UPP1 uridine phosphorylase 1 -0.0359178
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0357802
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.035594
EXT1 exostosin glycosyltransferase 1 -0.035166
AK1 adenylate kinase 1 -0.0346702
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0343346
PRSS3 protease, serine, 3 -0.0341371
DIAPH2 diaphanous-related formin 2 -0.0341144
CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) -0.0334068
OSMR oncostatin M receptor -0.0326906
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0318955
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0314768
PGK1 phosphoglycerate kinase 1 -0.03144
LY6E lymphocyte antigen 6 complex, locus E -0.0314109
HMGA2 high mobility group AT-hook 2 -0.0311481
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0311107
AKAP9 A kinase (PRKA) anchor protein 9 -0.0310894
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0306406
SLC35F3 solute carrier family 35, member F3 -0.0304911
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0304025
RPS21 ribosomal protein S21 -0.0302252
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0293314
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 -0.0292639
TRIP12 thyroid hormone receptor interactor 12 -0.0289164
ERGIC1 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 -0.0288569
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0288318