Vitamin K4_H4 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Vitamin K4 perturbation in H4 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Vitamin K4_H4 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VEGFA vascular endothelial growth factor A 0.0784062
MT2A metallothionein 2A 0.0736565
AKAP12 A kinase (PRKA) anchor protein 12 0.0549586
MSN moesin 0.0533695
NFE2L1 nuclear factor, erythroid 2-like 1 0.0475775
TPM3 tropomyosin 3 0.0372698
MAST4 microtubule associated serine/threonine kinase family member 4 0.0321016
STK17B serine/threonine kinase 17b 0.0309578
GOLGB1 golgin B1 0.0308284
MACF1 microtubule-actin crosslinking factor 1 0.0303828
TXNIP thioredoxin interacting protein 0.0266594
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0262076
B2M beta-2-microglobulin 0.0261152
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0254684
ZNF160 zinc finger protein 160 0.0249595
EHBP1L1 EH domain binding protein 1-like 1 0.0243729
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0237669
MYO1B myosin IB 0.0236126
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0233857
EEF2 eukaryotic translation elongation factor 2 0.022391
OR51B5 olfactory receptor, family 51, subfamily B, member 5 0.0220572
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0217354
PLAUR plasminogen activator, urokinase receptor 0.0215883
RHBDF2 rhomboid 5 homolog 2 (Drosophila) 0.0212534
MCL1 myeloid cell leukemia 1 0.02059
SPRED1 sprouty-related, EVH1 domain containing 1 0.0205174
HDAC9 histone deacetylase 9 0.0200006
PDCD4 programmed cell death 4 (neoplastic transformation inhibitor) 0.019976
EEF1G eukaryotic translation elongation factor 1 gamma 0.0199461
MYH9 myosin, heavy chain 9, non-muscle 0.0198942
AKAP9 A kinase (PRKA) anchor protein 9 0.0184153
AFF1 AF4/FMR2 family, member 1 0.0181866
ZNF148 zinc finger protein 148 0.0177252
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0174078
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0172273
DOCK5 dedicator of cytokinesis 5 0.0171919
USO1 USO1 vesicle transport factor 0.0170271
BPTF bromodomain PHD finger transcription factor 0.0165783
ZNF146 zinc finger protein 146 0.0164743
MYADM myeloid-associated differentiation marker 0.0163193
ZNF841 zinc finger protein 841 0.0162773
ZBTB20 zinc finger and BTB domain containing 20 0.0162526
MT1X metallothionein 1X 0.016217
LRP1B low density lipoprotein receptor-related protein 1B 0.0161149
CHRM3 cholinergic receptor, muscarinic 3 0.0159627
CAMSAP2 calmodulin regulated spectrin-associated protein family, member 2 0.0158889
PPIP5K2 diphosphoinositol pentakisphosphate kinase 2 0.0157731
ARHGAP5 Rho GTPase activating protein 5 0.0154205
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0153216
METTL15 methyltransferase like 15 0.0152352
TXNRD1 thioredoxin reductase 1 0.0152253
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0150374
SKAP2 src kinase associated phosphoprotein 2 0.0148745
IFIH1 interferon induced with helicase C domain 1 0.0145832
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0144599
VMP1 vacuole membrane protein 1 0.0144432
LENG8 leukocyte receptor cluster (LRC) member 8 0.0144353
FOSL2 FOS-like antigen 2 0.0143783
MPP2 membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) 0.0142386
BTBD10 BTB (POZ) domain containing 10 0.0141598
LIN7C lin-7 homolog C (C. elegans) 0.0140461
PRRG1 proline rich Gla (G-carboxyglutamic acid) 1 0.014025
TMEM106B transmembrane protein 106B 0.0139866
UMAD1 UBAP1-MVB12-associated (UMA) domain containing 1 0.0139413
CD47 CD47 molecule 0.0139219
SKIL SKI-like proto-oncogene 0.0139085
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0139012
PRKCE protein kinase C, epsilon 0.0138796
HSPA8 heat shock 70kDa protein 8 0.0138197
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0137973
SLC1A5 solute carrier family 1 (neutral amino acid transporter), member 5 0.0137909
TLN1 talin 1 0.0137838
PLEKHA2 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 0.0134122
SRBD1 S1 RNA binding domain 1 0.0132746
SDCCAG8 serologically defined colon cancer antigen 8 0.0132083
EFL1 elongation factor like GTPase 1 0.0132058
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0130986
R3HDM2 R3H domain containing 2 0.0129815
PPP2R5C protein phosphatase 2, regulatory subunit B', gamma 0.0129316
SMYD3 SET and MYND domain containing 3 0.0129071
C1S complement component 1, s subcomponent 0.0128655
CDK19 cyclin-dependent kinase 19 0.0128256
SGCE sarcoglycan, epsilon 0.0127826
FARS2 phenylalanyl-tRNA synthetase 2, mitochondrial 0.0127333
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.0126971
LIMCH1 LIM and calponin homology domains 1 0.0126969
VPS41 vacuolar protein sorting 41 homolog (S. cerevisiae) 0.0126812
TNIP1 TNFAIP3 interacting protein 1 0.012545
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0125285
NUDCD3 NudC domain containing 3 0.0124949
SVIL supervillin 0.0124713
CLCN3 chloride channel, voltage-sensitive 3 0.0124131
HERC5 HECT and RLD domain containing E3 ubiquitin protein ligase 5 0.0123239
RPL21 ribosomal protein L21 0.0123052
APLP2 amyloid beta (A4) precursor-like protein 2 0.0123007
SPACA6 sperm acrosome associated 6 0.012257
LIMS1 LIM and senescent cell antigen-like domains 1 0.012255
RCN1 reticulocalbin 1, EF-hand calcium binding domain 0.0121805
EXOC4 exocyst complex component 4 0.0121653
RPL35 ribosomal protein L35 0.0121189

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.329152
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.196405
IGFBP3 insulin-like growth factor binding protein 3 -0.109628
COL6A3 collagen, type VI, alpha 3 -0.107515
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.103339
FNDC3B fibronectin type III domain containing 3B -0.085493
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0852404
TRA2A transformer 2 alpha homolog (Drosophila) -0.0850244
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0808291
AHNAK AHNAK nucleoprotein -0.0675143
CANX calnexin -0.0651718
FN1 fibronectin 1 -0.0636784
ANXA2 annexin A2 -0.0634044
PTMA prothymosin, alpha -0.0618875
LMAN1 lectin, mannose-binding, 1 -0.0618286
TRIO trio Rho guanine nucleotide exchange factor -0.0614268
TMSB10 thymosin beta 10 -0.0596521
SQSTM1 sequestosome 1 -0.0595251
KYNU kynureninase -0.0578518
HILPDA hypoxia inducible lipid droplet-associated -0.0568136
NAV2 neuron navigator 2 -0.0554704
LOX lysyl oxidase -0.0542309
LCORL ligand dependent nuclear receptor corepressor-like -0.0535538
KDM3A lysine (K)-specific demethylase 3A -0.0533534
RAB7A RAB7A, member RAS oncogene family -0.0531125
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.0520103
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0502617
RLF rearranged L-myc fusion -0.0491037
EXT1 exostosin glycosyltransferase 1 -0.046546
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0463056
SLC38A1 solute carrier family 38, member 1 -0.0462248
PGK1 phosphoglycerate kinase 1 -0.0460143
NLGN1 neuroligin 1 -0.0449625
AFF4 AF4/FMR2 family, member 4 -0.0445679
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0440857
CADM1 cell adhesion molecule 1 -0.0434827
NAP1L1 nucleosome assembly protein 1-like 1 -0.0433997
WSB1 WD repeat and SOCS box containing 1 -0.0430571
MAP1B microtubule-associated protein 1B -0.0429945
NDRG1 N-myc downstream regulated 1 -0.0425315
GNAS GNAS complex locus -0.0416447
TUBB tubulin, beta class I -0.0402456
LDHA lactate dehydrogenase A -0.0400058
RAB1A RAB1A, member RAS oncogene family -0.0395097
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0392261
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0387213
SPAG9 sperm associated antigen 9 -0.0382864
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0382758
TNS3 tensin 3 -0.0382059
NIPBL Nipped-B homolog (Drosophila) -0.0371397
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 -0.0369921
HDLBP high density lipoprotein binding protein -0.0368507
TPM4 tropomyosin 4 -0.0367086
CLINT1 clathrin interactor 1 -0.0366868
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0366758
MARCHF6 membrane associated ring-CH-type finger 6 -0.0364922
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0356985
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0352342
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.03469
CD44 CD44 molecule (Indian blood group) -0.034679
COL5A1 collagen, type V, alpha 1 -0.0341727
PTK2 protein tyrosine kinase 2 -0.033892
ZFAND3 zinc finger, AN1-type domain 3 -0.0337059
GARS1 glycyl-tRNA synthetase 1 -0.0328258
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0328086
IGFBP5 insulin-like growth factor binding protein 5 -0.0327629
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0326651
MXI1 MAX interactor 1, dimerization protein -0.0323825
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0323443
VCL vinculin -0.0323223
ANLN anillin, actin binding protein -0.0322074
ERLEC1 endoplasmic reticulum lectin 1 -0.0321881
HLA-B major histocompatibility complex, class I, B -0.0320732
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0320678
SEC31A SEC31 homolog A (S. cerevisiae) -0.0316455
FUS FUS RNA binding protein -0.0314479
SENP5 SUMO1/sentrin specific peptidase 5 -0.0311317
CTBP2 C-terminal binding protein 2 -0.0306888
USP3 ubiquitin specific peptidase 3 -0.0306439
MTDH metadherin -0.030347
SERPINH1 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) -0.0303303
SCFD2 sec1 family domain containing 2 -0.0303052
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0303021
WDR45B WD repeat domain 45B -0.0301514
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0301011
SMC4 structural maintenance of chromosomes 4 -0.0300768
MAP4 microtubule-associated protein 4 -0.0300731
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0299463
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0298621
EIF3H eukaryotic translation initiation factor 3, subunit H -0.0296697
INHBA inhibin, beta A -0.0296658
RACK1 receptor for activated C kinase 1 -0.0296344
HIBADH 3-hydroxyisobutyrate dehydrogenase -0.0296218
FNIP1 folliculin interacting protein 1 -0.0294557
BIRC6 baculoviral IAP repeat containing 6 -0.029417
SEPTIN7 septin 7 -0.0293805
GLG1 golgi glycoprotein 1 -0.0292726
PTPRG protein tyrosine phosphatase, receptor type, G -0.0289813
CDK13 cyclin-dependent kinase 13 -0.0289283
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0289228