Vitiligo Gene Set

Dataset dbGAP Gene-Trait Associations
Category disease or phenotype associations
Type trait
Description A disorder consisting of areas of macular depigmentation, commonly on extensor aspects of extremities, on the face or neck, and in skin folds. Age of onset is often in young adulthood and the condition tends to progress gradually with lesions enlarging and extending until a quiescent state is reached. (Experimental Factor Ontology, EFO_0004208)
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Genes

15 genes associated with the trait Vitiligo in GWAS and other genetic association datasets from the dbGAP Gene-Trait Associations dataset.

Symbol Name Standardized Value
SLC44A4 solute carrier family 44, member 4 1.90318
HCG9 HLA complex group 9 (non-protein coding) 1.45275
BTNL2 butyrophilin-like 2 1.35255
TYR tyrosinase 1.33728
RNASET2 ribonuclease T2 1.27677
C1QTNF6 C1q and tumor necrosis factor related protein 6 1.26538
RERE arginine-glutamic acid dipeptide (RE) repeats 1.18594
LPP LIM domain containing preferred translocation partner in lipoma 1.01477
UBASH3A ubiquitin associated and SH3 domain containing A 0.862644
IL2RA interleukin 2 receptor, alpha 0.820059
GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1) 0.711358
SMOC2 SPARC related modular calcium binding 2 0.654022
PTPN22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) 0.64828
ZMIZ1 zinc finger, MIZ-type containing 1 0.518003
ATP8B1 ATPase, aminophospholipid transporter, class I, type 8B, member 1 0.406869