Volasertib_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Volasertib perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Volasertib_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VCL vinculin 0.131068
FMN1 formin 1 0.123505
TLE4 transducin-like enhancer of split 4 0.101507
ZSWIM6 zinc finger, SWIM-type containing 6 0.0809734
SLIT2 slit homolog 2 (Drosophila) 0.0670205
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.0640817
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0638284
TPST1 tyrosylprotein sulfotransferase 1 0.0629441
THSD4 thrombospondin, type I, domain containing 4 0.0611547
EXT1 exostosin glycosyltransferase 1 0.0589228
ZBTB20 zinc finger and BTB domain containing 20 0.0573283
B2M beta-2-microglobulin 0.0518027
SMYD3 SET and MYND domain containing 3 0.0482749
PTPRK protein tyrosine phosphatase, receptor type, K 0.0434894
BCAS3 breast carcinoma amplified sequence 3 0.040344
PLAT plasminogen activator, tissue 0.037143
NRG1 neuregulin 1 0.0369247
BPTF bromodomain PHD finger transcription factor 0.0365855
GLCCI1 glucocorticoid induced 1 0.0362135
FAM107B family with sequence similarity 107, member B 0.0348291
KLF7 Kruppel-like factor 7 (ubiquitous) 0.033479
COL4A5 collagen, type IV, alpha 5 0.0334269
DST dystonin 0.0326506
DSCAM Down syndrome cell adhesion molecule 0.0319391
HSPA8 heat shock 70kDa protein 8 0.0319204
CENPF centromere protein F, 350/400kDa 0.0317683
TRIO trio Rho guanine nucleotide exchange factor 0.0317142
ANTXR1 anthrax toxin receptor 1 0.0313416
SYT1 synaptotagmin I 0.0303781
ITPRID2 ITPR interacting domain containing 2 0.0301803
FNDC3A fibronectin type III domain containing 3A 0.0301427
RABGAP1L RAB GTPase activating protein 1-like 0.0296343
CEMIP2 cell migration inducing hyaluronidase 2 0.0295971
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0288764
GPATCH8 G patch domain containing 8 0.0288294
SOS1 son of sevenless homolog 1 (Drosophila) 0.0286937
INTS6 integrator complex subunit 6 0.0286925
RPS27A ribosomal protein S27a 0.02836
MYO6 myosin VI 0.0281617
LIMCH1 LIM and calponin homology domains 1 0.0281413
AFF4 AF4/FMR2 family, member 4 0.028067
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0279851
LRFN5 leucine rich repeat and fibronectin type III domain containing 5 0.0279181
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0278716
ANKRD12 ankyrin repeat domain 12 0.027771
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0273557
NFE2L2 nuclear factor, erythroid 2-like 2 0.0272622
EIF1 eukaryotic translation initiation factor 1 0.0272559
TRIP12 thyroid hormone receptor interactor 12 0.0271748
PDE10A phosphodiesterase 10A 0.0270058
IER3 immediate early response 3 0.0269586
NALF1 NALCN channel auxiliary factor 1 0.0268183
FER fer (fps/fes related) tyrosine kinase 0.0265801
ARID5B AT rich interactive domain 5B (MRF1-like) 0.0264586
ACTN1 actinin, alpha 1 0.0263733
COL4A1 collagen, type IV, alpha 1 0.0263673
SIK2 salt-inducible kinase 2 0.0260237
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.0259935
HAND2 heart and neural crest derivatives expressed 2 0.0257545
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0253902
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0247794
CSNK1A1 casein kinase 1, alpha 1 0.0247752
MED13 mediator complex subunit 13 0.0245944
ARHGAP24 Rho GTPase activating protein 24 0.0245375
PTPRM protein tyrosine phosphatase, receptor type, M 0.0239816
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0239619
TPT1 tumor protein, translationally-controlled 1 0.0239172
NPAS2 neuronal PAS domain protein 2 0.0238289
AMOTL1 angiomotin like 1 0.0237801
TPM1 tropomyosin 1 (alpha) 0.0237395
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0236983
GPBP1 GC-rich promoter binding protein 1 0.0236727
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0235498
PTPRE protein tyrosine phosphatase, receptor type, E 0.023455
MYH9 myosin, heavy chain 9, non-muscle 0.0228171
DNM3 dynamin 3 0.0225079
DUSP16 dual specificity phosphatase 16 0.0223953
FRMD4A FERM domain containing 4A 0.022342
IGF1R insulin-like growth factor 1 receptor 0.0222576
ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 0.0221934
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0221875
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0221762
SENP6 SUMO1/sentrin specific peptidase 6 0.022117
ZNF804A zinc finger protein 804A 0.0220535
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0218019
TCF12 transcription factor 12 0.0217979
LMNA lamin A/C 0.0215913
RIGI RNA sensor RIG-I 0.0215651
PDZRN3 PDZ domain containing ring finger 3 0.0213434
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0211524
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0211173
PCBP3 poly(rC) binding protein 3 0.0210534
ZC3H13 zinc finger CCCH-type containing 13 0.0210073
MBD5 methyl-CpG binding domain protein 5 0.0209175
PSD3 pleckstrin and Sec7 domain containing 3 0.0208518
PLPP1 phospholipid phosphatase 1 0.0207966
STXBP5 syntaxin binding protein 5 (tomosyn) 0.020779
TIMP3 TIMP metallopeptidase inhibitor 3 0.0206453
SCN9A sodium channel, voltage gated, type IX alpha subunit 0.0203151
NEO1 neogenin 1 0.0202525

decreased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.571145
IGF2 insulin-like growth factor 2 -0.172714
PTMA prothymosin, alpha -0.0559173
VIM vimentin -0.0426624
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0401258
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0395217
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.035523
CANX calnexin -0.034442
PDIA3 protein disulfide isomerase family A, member 3 -0.0337231
NDRG1 N-myc downstream regulated 1 -0.033273
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0331294
WDR45B WD repeat domain 45B -0.032102
IGFBP3 insulin-like growth factor binding protein 3 -0.0318328
LPIN1 lipin 1 -0.0308231
UBA2 ubiquitin-like modifier activating enzyme 2 -0.0298877
RPS6 ribosomal protein S6 -0.0298413
SCG2 secretogranin II -0.0282818
ARID4B AT rich interactive domain 4B (RBP1-like) -0.026782
RIC1 RAB6A GEF complex partner 1 -0.0255084
LDHB lactate dehydrogenase B -0.0253237
USP3 ubiquitin specific peptidase 3 -0.0248803
HILPDA hypoxia inducible lipid droplet-associated -0.0247786
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0247507
LMAN1 lectin, mannose-binding, 1 -0.0245694
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0238714
RAB6A RAB6A, member RAS oncogene family -0.0236253
IARS1 isoleucyl-tRNA synthetase 1 -0.023573
RPTOR regulatory associated protein of MTOR, complex 1 -0.0233385
RPLP0 ribosomal protein, large, P0 -0.023302
TENT5A terminal nucleotidyltransferase 5A -0.022989
RPS24 ribosomal protein S24 -0.0229257
RHOBTB3 Rho-related BTB domain containing 3 -0.0227015
RO60 Ro60, Y RNA binding protein -0.0225525
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0224238
VDAC1 voltage-dependent anion channel 1 -0.0222943
MBNL2 muscleblind-like splicing regulator 2 -0.0221454
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0220074
PTPRD protein tyrosine phosphatase, receptor type, D -0.0213543
SETD5 SET domain containing 5 -0.0211782
POTEF POTE ankyrin domain family, member F -0.0209098
USP34 ubiquitin specific peptidase 34 -0.0209012
GARS1 glycyl-tRNA synthetase 1 -0.0208806
FKBP1A FK506 binding protein 1A, 12kDa -0.0207434
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0206435
RNF150 ring finger protein 150 -0.0206382
TPI1 triosephosphate isomerase 1 -0.0200985
ZC3H15 zinc finger CCCH-type containing 15 -0.0200769
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0197403
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.019492
DSTN destrin (actin depolymerizing factor) -0.0193281
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0189109
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0188579
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0187243
CSDE1 cold shock domain containing E1, RNA-binding -0.0187103
RPL35A ribosomal protein L35a -0.0187004
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0185884
COPA coatomer protein complex, subunit alpha -0.0185688
PUM2 pumilio RNA-binding family member 2 -0.018474
PICALM phosphatidylinositol binding clathrin assembly protein -0.0183439
HMGA1 high mobility group AT-hook 1 -0.0178869
CDK19 cyclin-dependent kinase 19 -0.0176727
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0176168
ACBD3 acyl-CoA binding domain containing 3 -0.0173772
FNDC3B fibronectin type III domain containing 3B -0.0172063
GRIK5 glutamate receptor, ionotropic, kainate 5 -0.0171327
ANXA2 annexin A2 -0.0171157
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0169753
PAXBP1 PAX3 and PAX7 binding protein 1 -0.016971
CCNY cyclin Y -0.0169183
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0169016
THOC1 THO complex 1 -0.0168056
ESYT2 extended synaptotagmin-like protein 2 -0.0166516
CYFIP1 cytoplasmic FMR1 interacting protein 1 -0.016592
PLCB4 phospholipase C, beta 4 -0.0160282
ECPAS Ecm29 proteasome adaptor and scaffold -0.0159585
SEPTIN2 septin 2 -0.0159303
UBE3D ubiquitin protein ligase E3D -0.0159216
TENM3 teneurin transmembrane protein 3 -0.0159134
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0158181
ZFR zinc finger RNA binding protein -0.0156385
FUBP3 far upstream element (FUSE) binding protein 3 -0.0154964
PSMD12 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 -0.0154053
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.0154027
CUX1 cut-like homeobox 1 -0.0153541
FBL fibrillarin -0.0153448
PRTG protogenin -0.0151268
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.0150464
FNBP4 formin binding protein 4 -0.0150412
GATAD2B GATA zinc finger domain containing 2B -0.0150393
NPEPPS aminopeptidase puromycin sensitive -0.0150368
RBM26 RNA binding motif protein 26 -0.0149265
AOPEP aminopeptidase O (putative) -0.0148948
PFN1 profilin 1 -0.0148905
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0148755
BIRC6 baculoviral IAP repeat containing 6 -0.0148252
UFM1 ubiquitin-fold modifier 1 -0.0148097
CEP95 centrosomal protein 95kDa -0.0147621
BPNT2 3'(2'), 5'-bisphosphate nucleotidase 2 -0.0146668
ARID3A AT rich interactive domain 3A (BRIGHT-like) -0.0146146
RPS4X ribosomal protein S4, X-linked -0.0146112