Volasertib_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Volasertib perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Volasertib_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HDAC9 histone deacetylase 9 0.141362
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.126247
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.122906
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.10121
GLIS3 GLIS family zinc finger 3 0.0970872
IGFBP3 insulin-like growth factor binding protein 3 0.09116
PDE10A phosphodiesterase 10A 0.0873084
COL6A3 collagen, type VI, alpha 3 0.0856422
HMGA2 high mobility group AT-hook 2 0.0855613
VCAN versican 0.0818642
ZSWIM6 zinc finger, SWIM-type containing 6 0.0814233
AKAP12 A kinase (PRKA) anchor protein 12 0.0800469
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0787009
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.07807
TRIO trio Rho guanine nucleotide exchange factor 0.0775745
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0760319
CDH13 cadherin 13 0.0748697
FNIP1 folliculin interacting protein 1 0.0708685
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A 0.0707853
RND3 Rho family GTPase 3 0.0665636
GPC6 glypican 6 0.065811
EEF2 eukaryotic translation elongation factor 2 0.0622528
ASPH aspartate beta-hydroxylase 0.0570219
MYH9 myosin, heavy chain 9, non-muscle 0.0546318
TMSB4X thymosin beta 4, X-linked 0.0540356
INTS6 integrator complex subunit 6 0.0531588
SOD2 superoxide dismutase 2, mitochondrial 0.0527322
ATXN1 ataxin 1 0.0527302
SMAD3 SMAD family member 3 0.0524429
KYNU kynureninase 0.0510087
MACF1 microtubule-actin crosslinking factor 1 0.0500472
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0491384
ZBTB38 zinc finger and BTB domain containing 38 0.0483865
GOLGB1 golgin B1 0.0482265
FRMPD4 FERM and PDZ domain containing 4 0.0478582
SQSTM1 sequestosome 1 0.0475379
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0469554
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.045851
TMEM132D transmembrane protein 132D 0.044256
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0428146
PHF3 PHD finger protein 3 0.0419456
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0419154
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0417895
CANX calnexin 0.0416292
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.041356
DST dystonin 0.0412895
BACE2 beta-site APP-cleaving enzyme 2 0.0407584
SMYD3 SET and MYND domain containing 3 0.040497
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0403832
EFNA5 ephrin-A5 0.0398773
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.039853
RAB7A RAB7A, member RAS oncogene family 0.0398486
IARS1 isoleucyl-tRNA synthetase 1 0.039295
AHNAK AHNAK nucleoprotein 0.0392935
OSBPL8 oxysterol binding protein-like 8 0.0387796
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0381953
AFF3 AF4/FMR2 family, member 3 0.038117
ZBTB20 zinc finger and BTB domain containing 20 0.0380903
TNS3 tensin 3 0.0380583
COL5A1 collagen, type V, alpha 1 0.0379393
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0375303
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0370933
EGFR epidermal growth factor receptor 0.0366103
APP amyloid beta (A4) precursor protein 0.0359223
B2M beta-2-microglobulin 0.0356911
FBXL7 F-box and leucine-rich repeat protein 7 0.034482
DUSP10 dual specificity phosphatase 10 0.0344046
RPL14 ribosomal protein L14 0.0339156
VEGFA vascular endothelial growth factor A 0.0339111
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0336824
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0328978
ZFAND3 zinc finger, AN1-type domain 3 0.0327052
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0318456
RBFOX1 RNA binding protein, fox-1 homolog (C. elegans) 1 0.0317554
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0311508
RFX3 regulatory factor X, 3 (influences HLA class II expression) 0.0311459
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0306914
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0306874
KAT6B K(lysine) acetyltransferase 6B 0.0305514
ZEB1 zinc finger E-box binding homeobox 1 0.0302863
MLPH melanophilin 0.0296547
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0291729
PAPPA pregnancy-associated plasma protein A, pappalysin 1 0.0289499
PTPRK protein tyrosine phosphatase, receptor type, K 0.028947
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0285724
EXT1 exostosin glycosyltransferase 1 0.0283831
EXOC4 exocyst complex component 4 0.0279616
ABTB3 ankyrin repeat and BTB domain containing 3 0.0275413
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0274346
RUNX1 runt-related transcription factor 1 0.0266499
PCBP3 poly(rC) binding protein 3 0.0266458
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0261669
EHBP1 EH domain binding protein 1 0.0260543
RAD51B RAD51 paralog B 0.0260042
FAM20C family with sequence similarity 20, member C 0.0259722
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.0258977
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0257405
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0255937
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.0255475
TBC1D22A TBC1 domain family, member 22A 0.0252866

decreased expression

Symbol Name Standardized Value
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.186199
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.173089
UGCG UDP-glucose ceramide glucosyltransferase -0.112791
NAMPT nicotinamide phosphoribosyltransferase -0.109195
TMSB10 thymosin beta 10 -0.102655
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0962144
MT2A metallothionein 2A -0.0899757
FTL ferritin, light polypeptide -0.0898902
FN1 fibronectin 1 -0.0843702
PTMA prothymosin, alpha -0.0707397
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0675116
RPS6 ribosomal protein S6 -0.063881
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0597445
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0560012
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0550714
RTN4 reticulon 4 -0.0513107
HLA-B major histocompatibility complex, class I, B -0.049533
RPL35A ribosomal protein L35a -0.0489278
EGR1 early growth response 1 -0.0471418
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.046418
ADM adrenomedullin -0.0448783
COL1A1 collagen, type I, alpha 1 -0.0426131
CCNL1 cyclin L1 -0.0425087
ELL2 elongation factor, RNA polymerase II, 2 -0.0424845
HMGA1 high mobility group AT-hook 1 -0.0412686
CENPF centromere protein F, 350/400kDa -0.0406201
TXNIP thioredoxin interacting protein -0.0384087
NDRG1 N-myc downstream regulated 1 -0.0370745
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0368298
RPS23 ribosomal protein S23 -0.0361596
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0361406
RPS19 ribosomal protein S19 -0.0361289
GNAS GNAS complex locus -0.0358988
RPLP1 ribosomal protein, large, P1 -0.035608
RPL23 ribosomal protein L23 -0.0353986
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0347414
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0345591
PFN1 profilin 1 -0.0344949
KLF6 Kruppel-like factor 6 -0.0339656
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0334132
LOC112694756 uncharaterized LOC112694756 -0.0326104
TAPBP TAP binding protein (tapasin) -0.0325824
TMEM41B transmembrane protein 41B -0.0324316
ZNFX1 zinc finger, NFX1-type containing 1 -0.0322862
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0317013
IFITM3 interferon induced transmembrane protein 3 -0.0315225
S100A9 S100 calcium binding protein A9 -0.0313574
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0312774
RPL35 ribosomal protein L35 -0.0302917
POTEF POTE ankyrin domain family, member F -0.0295295
PCBP2 poly(rC) binding protein 2 -0.029301
CTSD cathepsin D -0.0291281
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0288725
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -0.0288665
RPS24 ribosomal protein S24 -0.0274865
IFITM1 interferon induced transmembrane protein 1 -0.0273922
DEK DEK proto-oncogene -0.0273446
RPL36 ribosomal protein L36 -0.0271601
RPL32 ribosomal protein L32 -0.0271053
PHIP pleckstrin homology domain interacting protein -0.0270568
RPS4X ribosomal protein S4, X-linked -0.0270491
PNISR PNN-interacting serine/arginine-rich protein -0.0269753
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0269628
RPL9 ribosomal protein L9 -0.0268562
ZNF292 zinc finger protein 292 -0.0267854
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.0265108
RPLP0 ribosomal protein, large, P0 -0.0262935
RAB6A RAB6A, member RAS oncogene family -0.0258536
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0256684
RPLP2 ribosomal protein, large, P2 -0.0255163
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0255054
UBC ubiquitin C -0.0254559
FOSL1 FOS-like antigen 1 -0.0251257
ARF4 ADP-ribosylation factor 4 -0.025084
BASP1 brain abundant, membrane attached signal protein 1 -0.0247803
RPL19 ribosomal protein L19 -0.0243412
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0243055
RPS14 ribosomal protein S14 -0.0241186
MKI67 marker of proliferation Ki-67 -0.0239219
RPL11 ribosomal protein L11 -0.0238621
TPX2 TPX2, microtubule-associated -0.0236011
H3-3B H3.3 histone B -0.0235571
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.023474
WASF2 WAS protein family, member 2 -0.0232601
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0232461
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0230355
ATP13A3 ATPase type 13A3 -0.0229989
DSTN destrin (actin depolymerizing factor) -0.0229778
TSC22D2 TSC22 domain family, member 2 -0.0229533
COL1A2 collagen, type I, alpha 2 -0.022849
WDR45B WD repeat domain 45B -0.0226721
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0226383
HILPDA hypoxia inducible lipid droplet-associated -0.0226316
RPS11 ribosomal protein S11 -0.0226218
PDIA3 protein disulfide isomerase family A, member 3 -0.0225687
FAM13A family with sequence similarity 13, member A -0.0224289
NKTR natural killer cell triggering receptor -0.0219403
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0218191
FRMD4A FERM domain containing 4A -0.0217913
RPS15 ribosomal protein S15 -0.0217702