Vortioxetine_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Vortioxetine perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Vortioxetine_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AREG amphiregulin 0.108146
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0459817
EEF2 eukaryotic translation elongation factor 2 0.0416843
SLC38A2 solute carrier family 38, member 2 0.03937
POTEF POTE ankyrin domain family, member F 0.0393011
CCNL1 cyclin L1 0.0335404
PCBP2 poly(rC) binding protein 2 0.033375
CCN2 cellular communication network factor 2 0.0328083
LOC112694756 uncharaterized LOC112694756 0.0312209
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0301333
RPL3 ribosomal protein L3 0.0301297
PTMS parathymosin 0.0266667
EGR1 early growth response 1 0.0255561
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0254578
YBX1 Y box binding protein 1 0.0248231
HDGF hepatoma-derived growth factor 0.0243553
BRD2 bromodomain containing 2 0.02401
PFN1 profilin 1 0.0216202
TSC22D2 TSC22 domain family, member 2 0.0193168
PCM1 pericentriolar material 1 0.0188965
RPL4 ribosomal protein L4 0.0187409
SSRP1 structure specific recognition protein 1 0.0183612
PLK2 polo-like kinase 2 0.0182233
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0171797
HLA-A major histocompatibility complex, class I, A 0.0168055
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0161183
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0160366
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.015539
ZSWIM6 zinc finger, SWIM-type containing 6 0.0151972
ARL5B ADP-ribosylation factor-like 5B 0.0148969
EEF1G eukaryotic translation elongation factor 1 gamma 0.0148903
ATP5F1B ATP synthase F1 subunit beta 0.0147298
DDIT3 DNA-damage-inducible transcript 3 0.0139343
ADAM17 ADAM metallopeptidase domain 17 0.013756
ADAM9 ADAM metallopeptidase domain 9 0.0136893
SRRM2 serine/arginine repetitive matrix 2 0.0131361
TGM2 transglutaminase 2 0.0129827
AKAP9 A kinase (PRKA) anchor protein 9 0.0127465
CHD1 chromodomain helicase DNA binding protein 1 0.0127335
COPA coatomer protein complex, subunit alpha 0.0124803
CPOX coproporphyrinogen oxidase 0.0121356
UBA6 ubiquitin-like modifier activating enzyme 6 0.0120799
NCAPD2 non-SMC condensin I complex, subunit D2 0.0119613
PTEN phosphatase and tensin homolog 0.0114512
BCLAF1 BCL2-associated transcription factor 1 0.0112421
PDK4 pyruvate dehydrogenase kinase, isozyme 4 0.011208
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0111329
FTH1 ferritin, heavy polypeptide 1 0.0108946
RBMS2 RNA binding motif, single stranded interacting protein 2 0.010821
BTBD10 BTB (POZ) domain containing 10 0.010644
FOXM1 forkhead box M1 0.010639
AP2M1 adaptor-related protein complex 2, mu 1 subunit 0.0106276
UBA1 ubiquitin-like modifier activating enzyme 1 0.010408
RIMKLB ribosomal modification protein rimK-like family member B 0.0103364
TPM3 tropomyosin 3 0.0103308
PCF11 PCF11 cleavage and polyadenylation factor subunit 0.0102047
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.00993432
NBR1 neighbor of BRCA1 gene 1 0.00977049
NUP58 nucleoporin 58 0.00955201
KMT2D lysine (K)-specific methyltransferase 2D 0.00938094
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.00936408
PHC3 polyhomeotic homolog 3 (Drosophila) 0.00922234
SRRM1 serine/arginine repetitive matrix 1 0.00921213
TCP1 t-complex 1 0.0091784
FNBP4 formin binding protein 4 0.00915974
MYH9 myosin, heavy chain 9, non-muscle 0.00900439
RPS12 ribosomal protein S12 0.0089587
ZNF146 zinc finger protein 146 0.00886097
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.00882801
GARS1 glycyl-tRNA synthetase 1 0.00881425
RAD23A RAD23 homolog A (S. cerevisiae) 0.00873453
ATP5F1A ATP synthase F1 subunit alpha 0.0086462
ATF7 activating transcription factor 7 0.00850949
SNX2 sorting nexin 2 0.00844751
LOC102724023 ES1 protein homolog, mitochondrial 0.008419
ERBIN erbb2 interacting protein 0.00833177
CALD1 caldesmon 1 0.00826007
MBD6 methyl-CpG binding domain protein 6 0.00820756
PELP1 proline, glutamate and leucine rich protein 1 0.00804418
EIF5AL1 eukaryotic translation initiation factor 5A-like 1 0.00792898
PAXBP1 PAX3 and PAX7 binding protein 1 0.00791152
LRP6 low density lipoprotein receptor-related protein 6 0.00790418
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.00786382
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.00783944
RPL21 ribosomal protein L21 0.00782138
SCAF4 SR-related CTD-associated factor 4 0.00776473
KDM6A lysine (K)-specific demethylase 6A 0.00775382
CASC3 cancer susceptibility candidate 3 0.00767608
SNX27 sorting nexin family member 27 0.00764803
PSME4 proteasome (prosome, macropain) activator subunit 4 0.00758658
RAB6A RAB6A, member RAS oncogene family 0.00758144
MEF2D myocyte enhancer factor 2D 0.00755447
NDUFAF2 NADH dehydrogenase (ubiquinone) complex I, assembly factor 2 0.00752988
MSN moesin 0.00749255
TTC3 tetratricopeptide repeat domain 3 0.00743921
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.00739538
BRD4 bromodomain containing 4 0.00735182
YTHDC1 YTH domain containing 1 0.00726777
RBBP7 retinoblastoma binding protein 7 0.00725624
LDHB lactate dehydrogenase B 0.00725327

decreased expression

Symbol Name Standardized Value
NLGN1 neuroligin 1 -0.164524
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.108903
PDE4D phosphodiesterase 4D, cAMP-specific -0.101438
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0890914
PCDH7 protocadherin 7 -0.0610613
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0593935
VIM vimentin -0.0533958
NAP1L1 nucleosome assembly protein 1-like 1 -0.0523532
MYL12B myosin, light chain 12B, regulatory -0.0521955
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.051845
TAS2R14 taste receptor, type 2, member 14 -0.0489913
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0489544
NHSL1 NHS-like 1 -0.0487633
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0476371
TPT1 tumor protein, translationally-controlled 1 -0.0454788
AHNAK AHNAK nucleoprotein -0.0448755
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0446727
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.0433618
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0429538
ERC1 ELKS/RAB6-interacting/CAST family member 1 -0.0419153
ACTG1 actin gamma 1 -0.041715
HMGA2 high mobility group AT-hook 2 -0.040764
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0401645
TMSB10 thymosin beta 10 -0.0398954
CUBN cubilin (intrinsic factor-cobalamin receptor) -0.0391712
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0390688
TRIO trio Rho guanine nucleotide exchange factor -0.0386197
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0376417
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.0367834
MGAT4C MGAT4 family, member C -0.0356938
FUS FUS RNA binding protein -0.0349147
TBC1D5 TBC1 domain family, member 5 -0.034092
MTAP methylthioadenosine phosphorylase -0.0339491
CANX calnexin -0.0338293
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.033782
RIMS2 regulating synaptic membrane exocytosis 2 -0.0337774
USP34 ubiquitin specific peptidase 34 -0.0336612
TENM3 teneurin transmembrane protein 3 -0.033576
WWOX WW domain containing oxidoreductase -0.0323736
BCHE butyrylcholinesterase -0.0317234
NEBL nebulette -0.0312667
EHBP1 EH domain binding protein 1 -0.0311301
RPS24 ribosomal protein S24 -0.0307224
MACF1 microtubule-actin crosslinking factor 1 -0.030277
RPLP1 ribosomal protein, large, P1 -0.0297361
GNAS GNAS complex locus -0.02968
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0293044
LMO7 LIM domain 7 -0.0291661
ADGRG6 adhesion G protein-coupled receptor G6 -0.0290629
ANKRD12 ankyrin repeat domain 12 -0.0289601
RABGAP1L RAB GTPase activating protein 1-like -0.0287628
ZNF638 zinc finger protein 638 -0.0285192
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0284191
ZNF217 zinc finger protein 217 -0.0283535
SMYD3 SET and MYND domain containing 3 -0.0281162
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0278744
RRM2 ribonucleotide reductase M2 -0.0274241
EXOC4 exocyst complex component 4 -0.0271572
YAP1 Yes-associated protein 1 -0.0270724
CELF2 CUGBP, Elav-like family member 2 -0.0266466
ASPH aspartate beta-hydroxylase -0.0264122
KDM3A lysine (K)-specific demethylase 3A -0.026064
IFIH1 interferon induced with helicase C domain 1 -0.0257931
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.025599
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0252518
PARD3 par-3 family cell polarity regulator -0.0251243
RPL38 ribosomal protein L38 -0.0251151
DST dystonin -0.0245205
NF1 neurofibromin 1 -0.0243713
RAD51B RAD51 paralog B -0.0239667
PTK2 protein tyrosine kinase 2 -0.0231584
SMC4 structural maintenance of chromosomes 4 -0.0229678
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0229647
SPATS2 spermatogenesis associated, serine-rich 2 -0.0228347
RPL35A ribosomal protein L35a -0.0228208
PTMA prothymosin, alpha -0.022805
MARCHF6 membrane associated ring-CH-type finger 6 -0.0227547
RPL34 ribosomal protein L34 -0.022451
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0221373
PDGFC platelet derived growth factor C -0.0217519
RASAL2 RAS protein activator like 2 -0.0217295
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0217118
LPP LIM domain containing preferred translocation partner in lipoma -0.0215733
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0214963
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0213867
KLF6 Kruppel-like factor 6 -0.0212297
TMEM123 transmembrane protein 123 -0.0211537
CCSER1 coiled-coil serine-rich protein 1 -0.0209156
R3HDM2 R3H domain containing 2 -0.0208473
SYT1 synaptotagmin I -0.0206657
VTI1A vesicle transport through interaction with t-SNAREs 1A -0.0205886
ARL15 ADP-ribosylation factor-like 15 -0.0205458
RPS21 ribosomal protein S21 -0.0204998
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0203087
RAB1A RAB1A, member RAS oncogene family -0.0202589
LRMDA leucine rich melanocyte differentiation associated -0.020118
RBM39 RNA binding motif protein 39 -0.0200251
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0199793
PRELID2 PRELI domain containing 2 -0.0199757
MAP4 microtubule-associated protein 4 -0.0199313