Vortioxetine_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Vortioxetine perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Vortioxetine_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF2 eukaryotic translation elongation factor 2 0.0264998
RPL4 ribosomal protein L4 0.0260942
RPL3 ribosomal protein L3 0.02508
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0201438
LOC112694756 uncharaterized LOC112694756 0.0198657
HSPA8 heat shock 70kDa protein 8 0.0197211
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0168754
POTEF POTE ankyrin domain family, member F 0.0165958
DST dystonin 0.016585
MSN moesin 0.0139215
MYH9 myosin, heavy chain 9, non-muscle 0.0132739
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0127846
MCL1 myeloid cell leukemia 1 0.0125101
TPM3 tropomyosin 3 0.0119536
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.0118565
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0117102
DPP10 dipeptidyl-peptidase 10 (non-functional) 0.0115794
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.0111836
CHL1 cell adhesion molecule L1-like 0.0106311
SRRM2 serine/arginine repetitive matrix 2 0.0102739
PDLIM5 PDZ and LIM domain 5 0.0100729
INTS6 integrator complex subunit 6 0.00988106
BRD2 bromodomain containing 2 0.00978825
FLNA filamin A, alpha 0.00971453
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.00949075
TNIP1 TNFAIP3 interacting protein 1 0.00919813
PRELID2 PRELI domain containing 2 0.00882118
PCDH9 protocadherin 9 0.00869884
LSAMP limbic system-associated membrane protein 0.00864716
RAD51B RAD51 paralog B 0.00859523
PKM pyruvate kinase, muscle 0.00858591
BMP6 bone morphogenetic protein 6 0.00855055
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.00854528
AUTS2 autism susceptibility candidate 2 0.00851302
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0084057
RPS18 ribosomal protein S18 0.0082875
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.00825446
PLK2 polo-like kinase 2 0.0081969
HMG20B high mobility group 20B 0.00816424
NRXN3 neurexin 3 0.00795999
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.00784983
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.00775457
APLP2 amyloid beta (A4) precursor-like protein 2 0.00771639
TENM2 teneurin transmembrane protein 2 0.00769479
LAMB4 laminin, beta 4 0.00768132
PPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 0.00760721
PCBP2 poly(rC) binding protein 2 0.00758607
ASXL2 additional sex combs like transcriptional regulator 2 0.00755677
SFPQ splicing factor proline/glutamine-rich 0.00746783
SF3A1 splicing factor 3a, subunit 1, 120kDa 0.00740509
CNOT1 CCR4-NOT transcription complex, subunit 1 0.00736471
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0072954
CRTC3 CREB regulated transcription coactivator 3 0.00725808
C9ORF153 chromosome 9 open reading frame 153 0.00724764
PLEC plectin 0.0072391
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.00718259
ZMIZ1 zinc finger, MIZ-type containing 1 0.00702556
CTSL cathepsin L 0.00688223
AADAC arylacetamide deacetylase 0.00684742
HDGF hepatoma-derived growth factor 0.00679329
CSRP1 cysteine and glycine-rich protein 1 0.00677866
NCOR2 nuclear receptor corepressor 2 0.00670991
NONO non-POU domain containing, octamer-binding 0.00666185
RABGGTB Rab geranylgeranyltransferase, beta subunit 0.00652491
FBXL7 F-box and leucine-rich repeat protein 7 0.00641099
PELP1 proline, glutamate and leucine rich protein 1 0.00622806
KRT19 keratin 19, type I 0.00616697
SLCO4A1 solute carrier organic anion transporter family, member 4A1 0.00613812
SESTD1 SEC14 and spectrin domains 1 0.00606482
CREB3L2 cAMP responsive element binding protein 3-like 2 0.00599168
EIF5 eukaryotic translation initiation factor 5 0.00598282
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0059698
PRDX3 peroxiredoxin 3 0.0058879
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.00579041
EMC1 ER membrane protein complex subunit 1 0.00578479
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.00576044
NFE2L1 nuclear factor, erythroid 2-like 1 0.00574391
MNT MAX network transcriptional repressor 0.00572555
H1-4 H1.4 linker histone, cluster member 0.00570908
GLRX glutaredoxin (thioltransferase) 0.00567835
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.00563247
HLA-A major histocompatibility complex, class I, A 0.0056188
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 0.00553684
GLS2 glutaminase 2 (liver, mitochondrial) 0.00536576
EEF1A2 eukaryotic translation elongation factor 1 alpha 2 0.00534653
PRPF8 pre-mRNA processing factor 8 0.00533624
SH3PXD2A SH3 and PX domains 2A 0.00532
KCTD3 potassium channel tetramerization domain containing 3 0.00526107
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0052274
FAT1 FAT atypical cadherin 1 0.00521578
GPATCH2 G patch domain containing 2 0.00521096
MAFK v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K 0.0051938
PCDH7 protocadherin 7 0.00518578
WWOX WW domain containing oxidoreductase 0.0051349
LAMA5 laminin, alpha 5 0.00509048
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.00508704
CHD1 chromodomain helicase DNA binding protein 1 0.00502102
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0050038
RPL21 ribosomal protein L21 0.0049208
HBS1L HBS1-like translational GTPase 0.00490827

decreased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.166145
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.159492
PDE4D phosphodiesterase 4D, cAMP-specific -0.134975
EFNA5 ephrin-A5 -0.117611
NAMPT nicotinamide phosphoribosyltransferase -0.0893993
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0872493
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.0824938
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0793453
SMYD3 SET and MYND domain containing 3 -0.0783731
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0783105
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0728236
VIM vimentin -0.0696853
GDA guanine deaminase -0.067283
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0660217
PDE10A phosphodiesterase 10A -0.0619916
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0607788
CANX calnexin -0.0587478
TMSB10 thymosin beta 10 -0.0582167
ELL2 elongation factor, RNA polymerase II, 2 -0.0568036
PSD3 pleckstrin and Sec7 domain containing 3 -0.0560077
FN1 fibronectin 1 -0.0556853
TXNRD1 thioredoxin reductase 1 -0.0553502
NALF1 NALCN channel auxiliary factor 1 -0.0552347
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0544641
RPLP1 ribosomal protein, large, P1 -0.0511093
TRIO trio Rho guanine nucleotide exchange factor -0.0506298
S100A6 S100 calcium binding protein A6 -0.0478201
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0476168
BASP1 brain abundant, membrane attached signal protein 1 -0.047613
MYOF myoferlin -0.0469187
LIMCH1 LIM and calponin homology domains 1 -0.0465523
TFPI2 tissue factor pathway inhibitor 2 -0.0461666
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0454763
NPAS2 neuronal PAS domain protein 2 -0.0448984
COL5A2 collagen, type V, alpha 2 -0.0440221
PTMA prothymosin, alpha -0.04373
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0436296
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0426788
PTGR1 prostaglandin reductase 1 -0.0418475
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0418177
NCOA7 nuclear receptor coactivator 7 -0.0417343
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0414693
DGKD diacylglycerol kinase, delta 130kDa -0.0405993
GNAS GNAS complex locus -0.0405569
FTL ferritin, light polypeptide -0.040196
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0401345
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 -0.0398993
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0383869
JMJD1C jumonji domain containing 1C -0.0381719
PBX1 pre-B-cell leukemia homeobox 1 -0.0375395
OGA O-GlcNAcase -0.036987
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.035128
RPS6 ribosomal protein S6 -0.0349499
COL8A1 collagen, type VIII, alpha 1 -0.0349457
MAML3 mastermind-like 3 (Drosophila) -0.0339036
ASPH aspartate beta-hydroxylase -0.0336606
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0335759
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 -0.0334534
WSB1 WD repeat and SOCS box containing 1 -0.0331066
RGS2 regulator of G-protein signaling 2 -0.033
STC1 stanniocalcin 1 -0.0326503
TM4SF1 transmembrane 4 L six family member 1 -0.0326378
NRCAM neuronal cell adhesion molecule -0.0321613
B2M beta-2-microglobulin -0.032141
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.0316164
PCBP3 poly(rC) binding protein 3 -0.0311882
ZEB2 zinc finger E-box binding homeobox 2 -0.0309808
PHF20 PHD finger protein 20 -0.0304887
IGF1R insulin-like growth factor 1 receptor -0.0301489
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0297064
KMT2C lysine (K)-specific methyltransferase 2C -0.0294571
BMERB1 bMERB domain containing 1 -0.0290663
OSMR oncostatin M receptor -0.0290461
NF1 neurofibromin 1 -0.0287165
IGFBP3 insulin-like growth factor binding protein 3 -0.0286458
RPS24 ribosomal protein S24 -0.0283521
MT2A metallothionein 2A -0.0281758
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0279478
RPL12 ribosomal protein L12 -0.0275623
ESYT2 extended synaptotagmin-like protein 2 -0.027387
LMAN1 lectin, mannose-binding, 1 -0.0269661
TBXT T-box transcription factor T -0.0267939
SRGN serglycin -0.0266638
NAP1L1 nucleosome assembly protein 1-like 1 -0.0263995
COL4A5 collagen, type IV, alpha 5 -0.026379
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.026313
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0263121
PM20D1 peptidase M20 domain containing 1 -0.0263055
KYNU kynureninase -0.0263009
TPT1 tumor protein, translationally-controlled 1 -0.0262268
SRPK2 SRSF protein kinase 2 -0.0258952
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0255589
DOCK4 dedicator of cytokinesis 4 -0.0255329
RPL35A ribosomal protein L35a -0.0255224
ZMYND8 zinc finger, MYND-type containing 8 -0.0254377
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0254163
MON2 MON2 homolog (S. cerevisiae) -0.0253682
TGFBI transforming growth factor, beta-induced, 68kDa -0.0252333
BIRC6 baculoviral IAP repeat containing 6 -0.0251963
S100A10 S100 calcium binding protein A10 -0.024906