XRK3F2_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description XRK3F2 perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the XRK3F2_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.172981
EGFR epidermal growth factor receptor 0.134309
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.10425
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0994919
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) 0.0944202
RNF213 ring finger protein 213 0.0848547
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0803839
PDE4D phosphodiesterase 4D, cAMP-specific 0.0774257
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0624186
LRP1B low density lipoprotein receptor-related protein 1B 0.0601643
MYOF myoferlin 0.0601276
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0596758
B2M beta-2-microglobulin 0.0527162
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0524837
EFNA5 ephrin-A5 0.0505701
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0505114
SP100 SP100 nuclear antigen 0.0497429
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0476172
RAD51B RAD51 paralog B 0.0444973
PM20D1 peptidase M20 domain containing 1 0.0433258
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0419852
CXCL8 chemokine (C-X-C motif) ligand 8 0.0419849
FNDC3B fibronectin type III domain containing 3B 0.0410674
LPP LIM domain containing preferred translocation partner in lipoma 0.0408764
IFI6 interferon, alpha-inducible protein 6 0.0405866
TPT1 tumor protein, translationally-controlled 1 0.0399065
LGALS12 lectin, galactoside-binding, soluble, 12 0.0390386
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0387558
RPS3 ribosomal protein S3 0.0385152
RPS8 ribosomal protein S8 0.0369052
RPS6 ribosomal protein S6 0.0354462
RPL31 ribosomal protein L31 0.0352177
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0349919
FOXP1 forkhead box P1 0.0347647
SLC38A2 solute carrier family 38, member 2 0.0347048
ZSWIM6 zinc finger, SWIM-type containing 6 0.0344965
KYNU kynureninase 0.0338722
IRS2 insulin receptor substrate 2 0.0337807
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0335936
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.033422
DSCAM Down syndrome cell adhesion molecule 0.0329541
RPL35A ribosomal protein L35a 0.0328867
RPL37A ribosomal protein L37a 0.0328464
NTN4 netrin 4 0.0325663
SLTM SAFB-like, transcription modulator 0.0313209
MX1 MX dynamin-like GTPase 1 0.0303537
RPS25 ribosomal protein S25 0.0303012
RPLP1 ribosomal protein, large, P1 0.0300173
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0295898
PABPC1 poly(A) binding protein, cytoplasmic 1 0.029498
NAP1L1 nucleosome assembly protein 1-like 1 0.0293356
RPLP0 ribosomal protein, large, P0 0.0291008
RPS12 ribosomal protein S12 0.0289964
HLA-B major histocompatibility complex, class I, B 0.0289301
CCSER1 coiled-coil serine-rich protein 1 0.0283323
SMOC1 SPARC related modular calcium binding 1 0.0282205
SQSTM1 sequestosome 1 0.0280975
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0278406
S100P S100 calcium binding protein P 0.0272947
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.02704
MCTP1 multiple C2 domains, transmembrane 1 0.0267476
RPL11 ribosomal protein L11 0.0266149
ENO1 enolase 1, (alpha) 0.0264781
DOCK5 dedicator of cytokinesis 5 0.0264495
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0258892
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0258373
KRT7 keratin 7, type II 0.0255153
TXNRD1 thioredoxin reductase 1 0.0254698
RPL37 ribosomal protein L37 0.0252325
IFI44L interferon-induced protein 44-like 0.0248529
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0248414
PMP22 peripheral myelin protein 22 0.0242632
DST dystonin 0.0240152
HDAC9 histone deacetylase 9 0.0238334
FTL ferritin, light polypeptide 0.0238304
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 0.0238037
RPS29 ribosomal protein S29 0.0236732
RPL30 ribosomal protein L30 0.0236448
AREG amphiregulin 0.0236308
CABLES1 Cdk5 and Abl enzyme substrate 1 0.0234523
SMYD3 SET and MYND domain containing 3 0.0234448
SVIL supervillin 0.0233859
MAP7 microtubule-associated protein 7 0.0232404
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 0.0229443
PLSCR1 phospholipid scramblase 1 0.022815
SMAD3 SMAD family member 3 0.0226227
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa 0.0223424
LOC102724023 ES1 protein homolog, mitochondrial 0.0222894
LIMCH1 LIM and calponin homology domains 1 0.0221652
BICD1 bicaudal D homolog 1 (Drosophila) 0.0221247
PKM pyruvate kinase, muscle 0.0219916
GPHN gephyrin 0.0218949
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0218874
RPS23 ribosomal protein S23 0.0218632
NCOA7 nuclear receptor coactivator 7 0.0217621
ATF6 activating transcription factor 6 0.0217274
TRIM56 tripartite motif containing 56 0.0216501
ZBTB20 zinc finger and BTB domain containing 20 0.0216376
EPAS1 endothelial PAS domain protein 1 0.0211488
RPS27A ribosomal protein S27a 0.0209907

decreased expression

Symbol Name Standardized Value
LAMC2 laminin, gamma 2 -0.0771292
H1-0 H1.0 linker histone -0.0556794
LAMA4 laminin, alpha 4 -0.0544569
FAM13A family with sequence similarity 13, member A -0.048872
GSK3B glycogen synthase kinase 3 beta -0.0481918
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0478448
NDRG1 N-myc downstream regulated 1 -0.0461951
CES1 carboxylesterase 1 -0.0455631
TOP1 topoisomerase (DNA) I -0.0432843
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0425586
CAMTA1 calmodulin binding transcription activator 1 -0.0415299
TMEM165 transmembrane protein 165 -0.0407967
HDLBP high density lipoprotein binding protein -0.0401291
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0395462
PTPRM protein tyrosine phosphatase, receptor type, M -0.0368685
MKI67 marker of proliferation Ki-67 -0.0367806
SCEL sciellin -0.0365233
NGLY1 N-glycanase 1 -0.0354827
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.032898
ASPH aspartate beta-hydroxylase -0.0320981
BRWD3 bromodomain and WD repeat domain containing 3 -0.0308413
BIRC6 baculoviral IAP repeat containing 6 -0.0307069
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0301087
BRWD1 bromodomain and WD repeat domain containing 1 -0.0294231
ZC3H11A zinc finger CCCH-type containing 11A -0.0291461
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0289948
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0284143
WDR45B WD repeat domain 45B -0.0280032
SEC31A SEC31 homolog A (S. cerevisiae) -0.0269483
SEPTIN2 septin 2 -0.0259539
PRRC2C proline-rich coiled-coil 2C -0.025948
ZFC3H1 zinc finger, C3H1-type containing -0.0258312
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.025617
WASF2 WAS protein family, member 2 -0.0255226
ZMYM2 zinc finger, MYM-type 2 -0.0252326
RASA2 RAS p21 protein activator 2 -0.0251825
SRP54 signal recognition particle 54kDa -0.0245003
KANSL1 KAT8 regulatory NSL complex subunit 1 -0.024479
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0234162
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0231581
KDM5B lysine (K)-specific demethylase 5B -0.0231166
LMO7 LIM domain 7 -0.0229695
CDCP1 CUB domain containing protein 1 -0.0229589
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0228927
OGA O-GlcNAcase -0.022869
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0228556
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.022814
OSMR oncostatin M receptor -0.0226115
SEPTIN10 septin 10 -0.0226091
NDE1 nudE neurodevelopment protein 1 -0.0220921
NAMPT nicotinamide phosphoribosyltransferase -0.0214759
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0214253
PTPRJ protein tyrosine phosphatase, receptor type, J -0.021397
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0211956
RAB1A RAB1A, member RAS oncogene family -0.021104
STRN3 striatin, calmodulin binding protein 3 -0.0209481
RIN2 Ras and Rab interactor 2 -0.020901
LAMB3 laminin, beta 3 -0.0208634
KDM2A lysine (K)-specific demethylase 2A -0.0207453
CSNK1A1 casein kinase 1, alpha 1 -0.0206728
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0205874
MARF1 meiosis regulator and mRNA stability factor 1 -0.0204308
SUCO SUN domain containing ossification factor -0.0203222
SLMAP sarcolemma associated protein -0.0199196
HYOU1 hypoxia up-regulated 1 -0.01982
ADAM17 ADAM metallopeptidase domain 17 -0.0194985
TSC22D2 TSC22 domain family, member 2 -0.0194535
PUM2 pumilio RNA-binding family member 2 -0.019432
KMT2E lysine (K)-specific methyltransferase 2E -0.0192919
USP3 ubiquitin specific peptidase 3 -0.0192791
ATP13A3 ATPase type 13A3 -0.0192441
RTN4 reticulon 4 -0.0190655
FLNB filamin B, beta -0.0190619
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0190122
HELZ helicase with zinc finger -0.0188884
TPD52 tumor protein D52 -0.0187376
GARS1 glycyl-tRNA synthetase 1 -0.0185472
MON2 MON2 homolog (S. cerevisiae) -0.0184867
RAB27B RAB27B, member RAS oncogene family -0.0178363
MORF4L2 mortality factor 4 like 2 -0.0175761
ECT2 epithelial cell transforming 2 -0.0171007
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0166727
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0165854
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0164344
COPA coatomer protein complex, subunit alpha -0.016391
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0163279
RCOR1 REST corepressor 1 -0.0162873
RNF145 ring finger protein 145 -0.016217
TFG TRK-fused gene -0.0161825
RNMT RNA (guanine-7-) methyltransferase -0.0161197
ZFAND3 zinc finger, AN1-type domain 3 -0.015971
SEC24D SEC24 family member D -0.0157754
AHNAK AHNAK nucleoprotein -0.0157743
MXI1 MAX interactor 1, dimerization protein -0.0157721
ARHGAP32 Rho GTPase activating protein 32 -0.0156478
BLZF1 basic leucine zipper nuclear factor 1 -0.0155814
PYGL phosphorylase, glycogen, liver -0.0154804
SBF2 SET binding factor 2 -0.0154564
CLTC clathrin, heavy chain (Hc) -0.0153608
MBOAT2 membrane bound O-acyltransferase domain containing 2 -0.0153406