XRK3F2_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description XRK3F2 perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the XRK3F2_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 0.113289
DSCAM Down syndrome cell adhesion molecule 0.0962263
PDE4D phosphodiesterase 4D, cAMP-specific 0.0903917
NIPBL Nipped-B homolog (Drosophila) 0.0862763
SMOC1 SPARC related modular calcium binding 1 0.0719164
RAD51B RAD51 paralog B 0.0704054
CEMIP cell migration inducing protein, hyaluronan binding 0.0626012
LAMC2 laminin, gamma 2 0.0598362
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0592703
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0547022
FTL ferritin, light polypeptide 0.0543104
HLA-A major histocompatibility complex, class I, A 0.0527555
MUC13 mucin 13, cell surface associated 0.0524458
B2M beta-2-microglobulin 0.0518114
LAMB3 laminin, beta 3 0.0517991
SLC38A2 solute carrier family 38, member 2 0.0517242
ACTN4 actinin, alpha 4 0.0508999
LIMCH1 LIM and calponin homology domains 1 0.0508669
KIF5B kinesin family member 5B 0.0505103
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0494774
EXT1 exostosin glycosyltransferase 1 0.0492169
LAMA4 laminin, alpha 4 0.0487316
HMGA2 high mobility group AT-hook 2 0.0476307
FMNL2 formin-like 2 0.0470467
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0462
PTMA prothymosin, alpha 0.0461882
VCL vinculin 0.0460493
GRB10 growth factor receptor-bound protein 10 0.0445755
GPHN gephyrin 0.0441026
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 0.0438771
METTL15 methyltransferase like 15 0.0421211
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0412868
SDCBP syndecan binding protein (syntenin) 0.0412538
MYO1E myosin IE 0.0411753
RAB10 RAB10, member RAS oncogene family 0.0409076
COPB2 coatomer protein complex, subunit beta 2 (beta prime) 0.040377
NFE2L2 nuclear factor, erythroid 2-like 2 0.0399089
DENND1A DENN/MADD domain containing 1A 0.0399018
LMO7 LIM domain 7 0.0394426
SQSTM1 sequestosome 1 0.0390571
VTI1A vesicle transport through interaction with t-SNAREs 1A 0.0390276
BCL2L1 BCL2-like 1 0.0389229
JUN jun proto-oncogene 0.0388045
RPL26 ribosomal protein L26 0.0387524
AFF1 AF4/FMR2 family, member 1 0.0386537
SPIDR scaffolding protein involved in DNA repair 0.0383037
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 0.0378785
TLK1 tousled-like kinase 1 0.037878
ISG15 ISG15 ubiquitin-like modifier 0.0373155
MYO10 myosin X 0.037113
USP47 ubiquitin specific peptidase 47 0.0369985
SMYD3 SET and MYND domain containing 3 0.0368855
FAM13A family with sequence similarity 13, member A 0.036858
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0366673
ARHGAP21 Rho GTPase activating protein 21 0.0364119
ZNFX1 zinc finger, NFX1-type containing 1 0.0363652
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0361999
FNBP4 formin binding protein 4 0.0360113
PRDM1 PR domain containing 1, with ZNF domain 0.0357652
GRAMD1B GRAM domain containing 1B 0.0356229
STEAP4 STEAP family member 4 0.0351378
UQCRB ubiquinol-cytochrome c reductase binding protein 0.0350389
ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 0.0348619
ZBTB43 zinc finger and BTB domain containing 43 0.0348587
CLASP2 cytoplasmic linker associated protein 2 0.0343946
TENT5A terminal nucleotidyltransferase 5A 0.0341751
NAP1L4 nucleosome assembly protein 1-like 4 0.033914
RORA RAR-related orphan receptor A 0.0338405
LSAMP limbic system-associated membrane protein 0.033774
RALY RALY heterogeneous nuclear ribonucleoprotein 0.0337473
EGR1 early growth response 1 0.0336895
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0333176
INHBA inhibin, beta A 0.0329743
C6ORF132 chromosome 6 open reading frame 132 0.0328993
MLEC malectin 0.0327064
FBXO32 F-box protein 32 0.032492
CFLAR CASP8 and FADD-like apoptosis regulator 0.032464
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0324064
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.0320184
RIGI RNA sensor RIG-I 0.0316685
FRY furry homolog (Drosophila) 0.031089
WNK1 WNK lysine deficient protein kinase 1 0.0309477
ZFHX3 zinc finger homeobox 3 0.0307586
FHIT fragile histidine triad 0.0307473
PTK2 protein tyrosine kinase 2 0.0306662
PICALM phosphatidylinositol binding clathrin assembly protein 0.0306209
DTNA dystrobrevin, alpha 0.0304498
KYNU kynureninase 0.0303666
RAI14 retinoic acid induced 14 0.0303255
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0302534
RPL8 ribosomal protein L8 0.0302364
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0302346
ERBIN erbb2 interacting protein 0.0302069
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.0302013
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0301425
ATG14 autophagy related 14 0.030009
GNAQ guanine nucleotide binding protein (G protein), q polypeptide 0.0298419
REEP3 receptor accessory protein 3 0.0298086
RNF149 ring finger protein 149 0.0297322
RPL38 ribosomal protein L38 0.0296994

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.17074
KRT17 keratin 17, type I -0.161686
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.146529
ANXA2 annexin A2 -0.13737
VIM vimentin -0.126454
ERRFI1 ERBB receptor feedback inhibitor 1 -0.118825
NDRG1 N-myc downstream regulated 1 -0.113368
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.105944
IGF2 insulin-like growth factor 2 -0.0984481
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0921554
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0869799
NAMPT nicotinamide phosphoribosyltransferase -0.0709829
NCOA3 nuclear receptor coactivator 3 -0.0707567
TMSB10 thymosin beta 10 -0.0679779
SLMAP sarcolemma associated protein -0.0668985
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0659805
FN1 fibronectin 1 -0.0659584
AKAP13 A kinase (PRKA) anchor protein 13 -0.0646867
KMT2C lysine (K)-specific methyltransferase 2C -0.062067
LPP LIM domain containing preferred translocation partner in lipoma -0.0618884
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0617938
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0608413
FLNB filamin B, beta -0.0585154
KTN1 kinectin 1 (kinesin receptor) -0.0583525
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.058055
RUNX1 runt-related transcription factor 1 -0.0563157
COPA coatomer protein complex, subunit alpha -0.0557143
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0547519
ACTG1 actin gamma 1 -0.0527787
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0523871
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0521567
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0511425
PRRC2C proline-rich coiled-coil 2C -0.0505414
RAB1A RAB1A, member RAS oncogene family -0.0499495
ASPH aspartate beta-hydroxylase -0.0495469
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0494657
PGK1 phosphoglycerate kinase 1 -0.0486605
QKI QKI, KH domain containing, RNA binding -0.0486381
FNDC3B fibronectin type III domain containing 3B -0.0478673
RPS6 ribosomal protein S6 -0.0477527
CANX calnexin -0.0475177
ATXN1 ataxin 1 -0.0459164
ENO1 enolase 1, (alpha) -0.0455046
EZR ezrin -0.0454303
CALU calumenin -0.0449676
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 -0.0443856
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0440199
SRPK2 SRSF protein kinase 2 -0.0429205
ESYT2 extended synaptotagmin-like protein 2 -0.0428306
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0425914
BAIAP2L1 BAI1-associated protein 2-like 1 -0.042338
TRA2A transformer 2 alpha homolog (Drosophila) -0.0423186
TPM4 tropomyosin 4 -0.042178
BAZ2A bromodomain adjacent to zinc finger domain, 2A -0.0419175
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0417395
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0417279
KPNB1 karyopherin (importin) beta 1 -0.0416656
RPL11 ribosomal protein L11 -0.0409998
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0409906
PKM pyruvate kinase, muscle -0.0408144
PHF21A PHD finger protein 21A -0.0407684
FNDC3A fibronectin type III domain containing 3A -0.0406448
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0404963
CYTH1 cytohesin 1 -0.0404207
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0403833
ZFAND3 zinc finger, AN1-type domain 3 -0.0402379
RPL19 ribosomal protein L19 -0.0402068
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) -0.040161
TRIO trio Rho guanine nucleotide exchange factor -0.0397941
TSC22D2 TSC22 domain family, member 2 -0.0391551
CDH13 cadherin 13 -0.0391514
IGFBP3 insulin-like growth factor binding protein 3 -0.0389519
RPL32 ribosomal protein L32 -0.0385799
MUC16 mucin 16, cell surface associated -0.0380207
RPLP0 ribosomal protein, large, P0 -0.0380018
SF3B1 splicing factor 3b, subunit 1, 155kDa -0.0379461
TOP1 topoisomerase (DNA) I -0.0379265
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0376528
KANSL1 KAT8 regulatory NSL complex subunit 1 -0.0373358
RPL34 ribosomal protein L34 -0.0372852
RTN4 reticulon 4 -0.0372081
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0366957
LAMB1 laminin, beta 1 -0.0365743
MEF2A myocyte enhancer factor 2A -0.03636
ANXA1 annexin A1 -0.0360478
CCDC6 coiled-coil domain containing 6 -0.0359817
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0357991
HBP1 HMG-box transcription factor 1 -0.0355002
ARHGEF4 Rho guanine nucleotide exchange factor (GEF) 4 -0.0354104
TPT1 tumor protein, translationally-controlled 1 -0.0350911
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0350536
RBM5 RNA binding motif protein 5 -0.0342643
GDF15 growth differentiation factor 15 -0.0340837
LOC112694756 uncharaterized LOC112694756 -0.0340832
BTG1 B-cell translocation gene 1, anti-proliferative -0.0338812
S100A9 S100 calcium binding protein A9 -0.0338215
GPC6 glypican 6 -0.0338119
RPL9 ribosomal protein L9 -0.0338067
CLINT1 clathrin interactor 1 -0.033781
SOS2 son of sevenless homolog 2 (Drosophila) -0.0337115