XRK3F2_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description XRK3F2 perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the XRK3F2_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.0977427
PDE10A phosphodiesterase 10A 0.0844557
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0722564
IGF1R insulin-like growth factor 1 receptor 0.0674266
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0660476
DENND5B DENN/MADD domain containing 5B 0.0637951
IFI6 interferon, alpha-inducible protein 6 0.0566819
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.0532788
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0531049
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0522977
BMP5 bone morphogenetic protein 5 0.050914
AEBP2 AE binding protein 2 0.0495313
ZBTB20 zinc finger and BTB domain containing 20 0.0472118
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0452108
WWOX WW domain containing oxidoreductase 0.0443563
RNF213 ring finger protein 213 0.043995
FNDC3B fibronectin type III domain containing 3B 0.0421646
HLA-B major histocompatibility complex, class I, B 0.0418877
BBS9 Bardet-Biedl syndrome 9 0.040056
TXNRD1 thioredoxin reductase 1 0.0397891
NCOA7 nuclear receptor coactivator 7 0.03967
RPS8 ribosomal protein S8 0.0384095
KLRD1 killer cell lectin-like receptor subfamily D, member 1 0.0383956
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0381172
LPP LIM domain containing preferred translocation partner in lipoma 0.0370404
RPL37 ribosomal protein L37 0.0355756
RPS3 ribosomal protein S3 0.0352437
MBNL2 muscleblind-like splicing regulator 2 0.0343284
RPL37A ribosomal protein L37a 0.0342902
SQSTM1 sequestosome 1 0.0332759
GOLGB1 golgin B1 0.0330291
RIMS2 regulating synaptic membrane exocytosis 2 0.032153
PRH1 proline-rich protein HaeIII subfamily 1 0.0305203
VIM vimentin 0.0305108
ZBTB1 zinc finger and BTB domain containing 1 0.0301843
MACROD2 MACRO domain containing 2 0.0298369
PDE4B phosphodiesterase 4B, cAMP-specific 0.0295843
TPT1 tumor protein, translationally-controlled 1 0.0292641
ADAR adenosine deaminase, RNA-specific 0.0285485
MED13L mediator complex subunit 13-like 0.0284684
PHF3 PHD finger protein 3 0.027621
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.027484
BPTF bromodomain PHD finger transcription factor 0.0273221
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0269183
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.026511
ZSWIM6 zinc finger, SWIM-type containing 6 0.025806
AHNAK AHNAK nucleoprotein 0.0257917
TAS2R14 taste receptor, type 2, member 14 0.0255628
RPL31 ribosomal protein L31 0.0255087
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0254517
SNAP25 synaptosomal-associated protein, 25kDa 0.0252738
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0251907
RPL35A ribosomal protein L35a 0.0250148
GNAS GNAS complex locus 0.0248329
PATJ PATJ crumbs cell polarity complex component 0.0247719
LGALS12 lectin, galactoside-binding, soluble, 12 0.0244473
LRP1B low density lipoprotein receptor-related protein 1B 0.0241078
ATF6 activating transcription factor 6 0.0238798
ATXN1 ataxin 1 0.0238634
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0237956
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0237905
SSH2 slingshot protein phosphatase 2 0.0237828
CANX calnexin 0.0235992
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0235798
RPS12 ribosomal protein S12 0.023506
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.023405
GABARAPL1 GABA(A) receptor-associated protein like 1 0.0233837
NAP1L1 nucleosome assembly protein 1-like 1 0.0232558
EXOC4 exocyst complex component 4 0.0229792
B2M beta-2-microglobulin 0.0228352
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0226483
BCAS3 breast carcinoma amplified sequence 3 0.0226318
IFIH1 interferon induced with helicase C domain 1 0.0223505
FTL ferritin, light polypeptide 0.0223041
MRTFA myocardin related transcription factor A 0.021716
CUX1 cut-like homeobox 1 0.0216075
EEF2 eukaryotic translation elongation factor 2 0.0215762
DSPP dentin sialophosphoprotein 0.0214149
DTX3L deltex 3 like, E3 ubiquitin ligase 0.0211466
ENO1 enolase 1, (alpha) 0.0211235
SMYD3 SET and MYND domain containing 3 0.0207684
AGBL4 ATP/GTP binding protein-like 4 0.0207573
SUMF1 sulfatase modifying factor 1 0.0204233
TNRC6B trinucleotide repeat containing 6B 0.0203679
RPL11 ribosomal protein L11 0.0203016
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0202386
N4BP2L2 NEDD4 binding protein 2-like 2 0.0201195
STX8 syntaxin 8 0.0198592
EXOC6B exocyst complex component 6B 0.0197685
DST dystonin 0.0197128
TRIM37 tripartite motif containing 37 0.0195802
ETV6 ets variant 6 0.0194891
MBD5 methyl-CpG binding domain protein 5 0.0194889
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 0.0188495
STXBP5 syntaxin binding protein 5 (tomosyn) 0.0187542
MAP7 microtubule-associated protein 7 0.0186056
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0183048
FOXP1 forkhead box P1 0.0182774
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0181529
CEP112 centrosomal protein 112kDa 0.0181288

decreased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 -0.379598
EGR1 early growth response 1 -0.106786
TFPI2 tissue factor pathway inhibitor 2 -0.0823247
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0779599
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0739316
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0729493
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.070814
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0678862
MCL1 myeloid cell leukemia 1 -0.0597615
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0579399
POTEF POTE ankyrin domain family, member F -0.0549033
MARCHF4 membrane associated ring-CH-type finger 4 -0.0545296
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0543912
RTN4 reticulon 4 -0.0539053
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0527301
ACTN1 actinin, alpha 1 -0.0522952
NABP1 nucleic acid binding protein 1 -0.0512381
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0499657
STC1 stanniocalcin 1 -0.0488829
TMSB10 thymosin beta 10 -0.0487305
TPM3 tropomyosin 3 -0.0481882
CDK17 cyclin-dependent kinase 17 -0.0470885
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0465805
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0460458
EXT1 exostosin glycosyltransferase 1 -0.0448137
RBM25 RNA binding motif protein 25 -0.0439835
FMNL2 formin-like 2 -0.0436878
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0425695
HMGA2 high mobility group AT-hook 2 -0.0418521
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0411328
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0396484
PFN1 profilin 1 -0.039493
TM4SF1 transmembrane 4 L six family member 1 -0.0372656
RRM2 ribonucleotide reductase M2 -0.036104
CCNL1 cyclin L1 -0.0359212
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0358096
RAB7A RAB7A, member RAS oncogene family -0.0352193
GPHN gephyrin -0.0350243
DOCK5 dedicator of cytokinesis 5 -0.0349331
MACF1 microtubule-actin crosslinking factor 1 -0.0347991
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0338384
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0332483
CDCP1 CUB domain containing protein 1 -0.0330826
PRRC2C proline-rich coiled-coil 2C -0.0328941
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0328224
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 -0.0327858
YBX3 Y box binding protein 3 -0.0320946
YBX1 Y box binding protein 1 -0.0318716
WWTR1 WW domain containing transcription regulator 1 -0.0315109
NTSR1 neurotensin receptor 1 (high affinity) -0.0313397
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0311304
CSNK1A1 casein kinase 1, alpha 1 -0.0310993
ATP13A3 ATPase type 13A3 -0.0309696
MYL12B myosin, light chain 12B, regulatory -0.0306992
ELL2 elongation factor, RNA polymerase II, 2 -0.030506
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0304318
TRIO trio Rho guanine nucleotide exchange factor -0.0302943
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0301759
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0295076
SMC4 structural maintenance of chromosomes 4 -0.0294638
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0290248
SHB Src homology 2 domain containing adaptor protein B -0.0288826
BIRC6 baculoviral IAP repeat containing 6 -0.0276597
PPME1 protein phosphatase methylesterase 1 -0.0269802
MT2A metallothionein 2A -0.0267732
SNX9 sorting nexin 9 -0.0261787
SRPK1 SRSF protein kinase 1 -0.0261587
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0260415
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein -0.025994
CTTNBP2NL CTTNBP2 N-terminal like -0.025831
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0256807
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0255977
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) -0.0255717
EIF5B eukaryotic translation initiation factor 5B -0.0254252
NUP58 nucleoporin 58 -0.0252446
ACTR3 ARP3 actin-related protein 3 homolog (yeast) -0.0252284
KDM7A lysine (K)-specific demethylase 7A -0.0251305
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0248139
SBF2 SET binding factor 2 -0.0247672
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0246395
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0245559
YES1 YES proto-oncogene 1, Src family tyrosine kinase -0.0244986
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.024246
RUSC2 RUN and SH3 domain containing 2 -0.0240736
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 -0.024066
PHIP pleckstrin homology domain interacting protein -0.0239525
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0239433
NOP58 NOP58 ribonucleoprotein -0.0238094
TPI1 triosephosphate isomerase 1 -0.0236313
PNN pinin, desmosome associated protein -0.0233831
GOLGA4 golgin A4 -0.0232578
ZCCHC7 zinc finger, CCHC domain containing 7 -0.023208
RASA2 RAS p21 protein activator 2 -0.022868
ANO6 anoctamin 6 -0.0228323
CSDE1 cold shock domain containing E1, RNA-binding -0.022604
NT5E 5'-nucleotidase, ecto (CD73) -0.0225677
COG5 component of oligomeric golgi complex 5 -0.0224204
TPM2 tropomyosin 2 (beta) -0.0223848
GARS1 glycyl-tRNA synthetase 1 -0.0222663
ANXA5 annexin A5 -0.0221509