XRK3F2_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description XRK3F2 perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the XRK3F2_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PCLO piccolo presynaptic cytomatrix protein 0.128107
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.104254
COL11A1 collagen, type XI, alpha 1 0.0985623
FOXP2 forkhead box P2 0.0948556
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.080746
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0779027
CADM2 cell adhesion molecule 2 0.0727324
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0716657
CDH19 cadherin 19, type 2 0.065212
MEIS2 Meis homeobox 2 0.0618943
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.059883
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0585594
EIF1 eukaryotic translation initiation factor 1 0.0573046
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0563512
MPG N-methylpurine-DNA glycosylase 0.0523005
RIMS2 regulating synaptic membrane exocytosis 2 0.0486744
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0466624
MKI67 marker of proliferation Ki-67 0.0461469
PDGFC platelet derived growth factor C 0.0458082
PBX3 pre-B-cell leukemia homeobox 3 0.0449938
ZC3H12B zinc finger CCCH-type containing 12B 0.0443724
LRRC4C leucine rich repeat containing 4C 0.0439773
RPS8 ribosomal protein S8 0.0433006
BCAS3 breast carcinoma amplified sequence 3 0.0429946
NTM neurotrimin 0.0427283
RAD51B RAD51 paralog B 0.0415419
EXT1 exostosin glycosyltransferase 1 0.0415215
RPS16 ribosomal protein S16 0.0413405
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0412992
TTC28 tetratricopeptide repeat domain 28 0.0407609
ZBTB20 zinc finger and BTB domain containing 20 0.0396145
TBL1X transducin (beta)-like 1X-linked 0.0388006
NFE2L2 nuclear factor, erythroid 2-like 2 0.0386874
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0381634
UBE2H ubiquitin-conjugating enzyme E2H 0.0377424
CSMD3 CUB and Sushi multiple domains 3 0.0376636
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0369914
WWC2 WW and C2 domain containing 2 0.0369229
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0365159
SPIDR scaffolding protein involved in DNA repair 0.036157
WDPCP WD repeat containing planar cell polarity effector 0.0358825
EXOC6B exocyst complex component 6B 0.0350336
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0345601
ARL15 ADP-ribosylation factor-like 15 0.0343297
KIF4A kinesin family member 4A 0.0340686
PGPEP1L pyroglutamyl-peptidase I-like 0.0340085
PHIP pleckstrin homology domain interacting protein 0.0335682
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0325333
CENPF centromere protein F, 350/400kDa 0.0315336
FBXO17 F-box protein 17 0.0314877
GPC3 glypican 3 0.0314707
ACTG1 actin gamma 1 0.0310002
BTBD9 BTB (POZ) domain containing 9 0.0308748
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 0.0307957
TENM3 teneurin transmembrane protein 3 0.0306564
RPL35A ribosomal protein L35a 0.0306481
VCL vinculin 0.0306395
TBCA tubulin folding cofactor A 0.0305883
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0298274
UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 0.0296463
PRKD1 protein kinase D1 0.0294498
BNC2 basonuclin 2 0.029306
DOCK5 dedicator of cytokinesis 5 0.0292436
MAP4 microtubule-associated protein 4 0.0287663
CCAR1 cell division cycle and apoptosis regulator 1 0.02874
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0285066
ELP4 elongator acetyltransferase complex subunit 4 0.0283707
SEC31A SEC31 homolog A (S. cerevisiae) 0.0281869
LPP LIM domain containing preferred translocation partner in lipoma 0.0277903
METAP2 methionyl aminopeptidase 2 0.0277586
RPLP0 ribosomal protein, large, P0 0.0276812
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 0.0267171
DST dystonin 0.0264536
TRPS1 trichorhinophalangeal syndrome I 0.0262851
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.0260817
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0259033
ATP5F1B ATP synthase F1 subunit beta 0.025839
ARID5B AT rich interactive domain 5B (MRF1-like) 0.0255399
MPP2 membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) 0.0255023
TARS1 threonyl-tRNA synthetase 1 0.0251006
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0250813
EEF1G eukaryotic translation elongation factor 1 gamma 0.024955
DNAH14 dynein, axonemal, heavy chain 14 0.0248358
DICER1 dicer 1, ribonuclease type III 0.0246364
SUPT16H suppressor of Ty 16 homolog (S. cerevisiae) 0.024454
PPHLN1 periphilin 1 0.0243651
INTS6 integrator complex subunit 6 0.0243336
RPL31 ribosomal protein L31 0.0243205
HDAC8 histone deacetylase 8 0.0242381
PARD3 par-3 family cell polarity regulator 0.0239265
RPS23 ribosomal protein S23 0.0239259
RFX3 regulatory factor X, 3 (influences HLA class II expression) 0.0239097
ACBD6 acyl-CoA binding domain containing 6 0.0238461
SCLT1 sodium channel and clathrin linker 1 0.0238164
ZSWIM6 zinc finger, SWIM-type containing 6 0.0238029
B2M beta-2-microglobulin 0.0237322
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0236775
TRIP11 thyroid hormone receptor interactor 11 0.0236741
PALS1 protein associated with LIN7 1, MAGUK p55 family member 0.0236493
JARID2 jumonji, AT rich interactive domain 2 0.0236385

decreased expression

Symbol Name Standardized Value
PGAP1 post-GPI attachment to proteins 1 -0.129669
ADGRL2 adhesion G protein-coupled receptor L2 -0.0944185
TRIO trio Rho guanine nucleotide exchange factor -0.0812044
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0809024
FNDC3B fibronectin type III domain containing 3B -0.0789927
ZNF292 zinc finger protein 292 -0.0708959
TSC22D2 TSC22 domain family, member 2 -0.0683578
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.0682218
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0676988
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.066597
SRP54 signal recognition particle 54kDa -0.0619795
RAI1 retinoic acid induced 1 -0.0609143
ADGRV1 adhesion G protein-coupled receptor V1 -0.0606824
WSB1 WD repeat and SOCS box containing 1 -0.0600529
ITGAV integrin, alpha V -0.0572513
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0559465
PCDH9 protocadherin 9 -0.0526229
KDM3A lysine (K)-specific demethylase 3A -0.0504355
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0499226
DSCAM Down syndrome cell adhesion molecule -0.0496646
PTMA prothymosin, alpha -0.0496115
GOLGA4 golgin A4 -0.0495955
CHD1 chromodomain helicase DNA binding protein 1 -0.0489847
STRN3 striatin, calmodulin binding protein 3 -0.048777
NHSL1 NHS-like 1 -0.0480582
PEG10 paternally expressed 10 -0.0479863
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0479035
TMSB4X thymosin beta 4, X-linked -0.0457884
MED13L mediator complex subunit 13-like -0.0456025
ADAM9 ADAM metallopeptidase domain 9 -0.0443745
USP53 ubiquitin specific peptidase 53 -0.0434403
NRG1 neuregulin 1 -0.043118
SKIC3 SKI3 subunit of superkiller complex -0.043111
PCDH7 protocadherin 7 -0.0429422
SETD5 SET domain containing 5 -0.0428907
PRRC2C proline-rich coiled-coil 2C -0.0420842
LHFPL6 LHFPL tetraspan subfamily member 6 -0.0415833
KMT2E lysine (K)-specific methyltransferase 2E -0.039367
MARCHF6 membrane associated ring-CH-type finger 6 -0.0393564
ZFAND3 zinc finger, AN1-type domain 3 -0.0387252
OLA1 Obg-like ATPase 1 -0.0386768
MRPS6 mitochondrial ribosomal protein S6 -0.0385769
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.038317
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0377507
CSNK1A1 casein kinase 1, alpha 1 -0.0375273
UBA2 ubiquitin-like modifier activating enzyme 2 -0.03751
PPP4R1 protein phosphatase 4, regulatory subunit 1 -0.0368334
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 -0.0367548
PFN1 profilin 1 -0.0365391
AGTPBP1 ATP/GTP binding protein 1 -0.0362445
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit -0.0360241
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0351504
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0348877
SLC44A5 solute carrier family 44, member 5 -0.0348795
QKI QKI, KH domain containing, RNA binding -0.0342369
COL5A2 collagen, type V, alpha 2 -0.0340306
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0335243
YES1 YES proto-oncogene 1, Src family tyrosine kinase -0.0334831
POTEF POTE ankyrin domain family, member F -0.0332828
RTN4 reticulon 4 -0.0331157
URI1 URI1, prefoldin-like chaperone -0.0329673
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0326109
CDC73 cell division cycle 73 -0.0323088
PDIA6 protein disulfide isomerase family A, member 6 -0.0321094
TBC1D12 TBC1 domain family, member 12 -0.0319676
MACF1 microtubule-actin crosslinking factor 1 -0.0319532
BIRC6 baculoviral IAP repeat containing 6 -0.0318594
PRTG protogenin -0.0316886
TCEA1 transcription elongation factor A (SII), 1 -0.0315102
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0313077
UBE2G1 ubiquitin-conjugating enzyme E2G 1 -0.0312215
CCDC88A coiled-coil domain containing 88A -0.0310754
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial -0.0310498
PRR16 proline rich 16 -0.0310246
AKAP13 A kinase (PRKA) anchor protein 13 -0.0307092
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0305494
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0300798
MYO10 myosin X -0.030022
NRIP1 nuclear receptor interacting protein 1 -0.0296586
H1-0 H1.0 linker histone -0.0296122
PICALM phosphatidylinositol binding clathrin assembly protein -0.0294642
CDH10 cadherin 10, type 2 (T2-cadherin) -0.0287621
TET1 tet methylcytosine dioxygenase 1 -0.0278884
CECR2 cat eye syndrome chromosome region, candidate 2 -0.027792
SREBF2 sterol regulatory element binding transcription factor 2 -0.0277538
SEPTIN7 septin 7 -0.0277321
ADGRG6 adhesion G protein-coupled receptor G6 -0.0276274
FBXO11 F-box protein 11 -0.0276026
COL1A2 collagen, type I, alpha 2 -0.0275586
MDN1 MDN1, midasin homolog (yeast) -0.0275433
HMGB1 high mobility group box 1 -0.0273811
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0272966
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0271705
KMT2C lysine (K)-specific methyltransferase 2C -0.0271342
CAVIN1 caveolae associated protein 1 -0.0270008
SEC23A Sec23 homolog A (S. cerevisiae) -0.0269246
RAB6A RAB6A, member RAS oncogene family -0.0267553
HNRNPL heterogeneous nuclear ribonucleoprotein L -0.0266536
RABGAP1 RAB GTPase activating protein 1 -0.0264787
SUCO SUN domain containing ossification factor -0.0262977