XRK3F2_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description XRK3F2 perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the XRK3F2_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.243674
EXT1 exostosin glycosyltransferase 1 0.159693
SQSTM1 sequestosome 1 0.143814
FTL ferritin, light polypeptide 0.0944158
STC2 stanniocalcin 2 0.0836586
PALLD palladin, cytoskeletal associated protein 0.0603039
IFI27 interferon, alpha-inducible protein 27 0.0600066
SOX4 SRY (sex determining region Y)-box 4 0.059679
B2M beta-2-microglobulin 0.0592612
ANKRD28 ankyrin repeat domain 28 0.0592464
HLA-B major histocompatibility complex, class I, B 0.057919
TRIO trio Rho guanine nucleotide exchange factor 0.0563818
SLC38A2 solute carrier family 38, member 2 0.0518156
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0490617
RPL31 ribosomal protein L31 0.0489213
ZSWIM6 zinc finger, SWIM-type containing 6 0.048406
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0474799
INTS6 integrator complex subunit 6 0.0467984
LIMCH1 LIM and calponin homology domains 1 0.0456773
SFTPA2 surfactant protein A2 0.0434504
NTN4 netrin 4 0.0428764
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.0406372
EIF1 eukaryotic translation initiation factor 1 0.0403786
RASAL2 RAS protein activator like 2 0.03964
TNS3 tensin 3 0.0394098
ENAH enabled homolog (Drosophila) 0.0384013
LOC102724023 ES1 protein homolog, mitochondrial 0.0382569
AEBP2 AE binding protein 2 0.0375658
ENO2 enolase 2 (gamma, neuronal) 0.0367261
RANBP17 RAN binding protein 17 0.0359126
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0347746
HLA-A major histocompatibility complex, class I, A 0.0338395
ATF6 activating transcription factor 6 0.0338153
TGFB2 transforming growth factor, beta 2 0.0330328
TMSB10 thymosin beta 10 0.032874
TPT1 tumor protein, translationally-controlled 1 0.0314961
AHRR aryl-hydrocarbon receptor repressor 0.0308388
DNAH5 dynein, axonemal, heavy chain 5 0.0307763
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0306416
ZBTB20 zinc finger and BTB domain containing 20 0.0302792
FBN1 fibrillin 1 0.0302721
GLIS3 GLIS family zinc finger 3 0.0302027
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0299145
NXN nucleoredoxin 0.0293267
LRMDA leucine rich melanocyte differentiation associated 0.0291767
CPEB4 cytoplasmic polyadenylation element binding protein 4 0.0288114
ACTG1 actin gamma 1 0.0278345
IFI6 interferon, alpha-inducible protein 6 0.0277183
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 0.0275895
AOPEP aminopeptidase O (putative) 0.0274293
VCL vinculin 0.0272567
MRPS6 mitochondrial ribosomal protein S6 0.027111
PLIN2 perilipin 2 0.0269613
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0269128
N4BP2L2 NEDD4 binding protein 2-like 2 0.0262992
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0258863
RPL9 ribosomal protein L9 0.025627
RAB31 RAB31, member RAS oncogene family 0.0252894
SYT1 synaptotagmin I 0.0245127
RACK1 receptor for activated C kinase 1 0.0245011
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0241673
RPS29 ribosomal protein S29 0.0237059
SAMD4A sterile alpha motif domain containing 4A 0.0230518
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0229608
AHI1 Abelson helper integration site 1 0.0225626
RPS23 ribosomal protein S23 0.0224848
RPS11 ribosomal protein S11 0.0223822
RNF213 ring finger protein 213 0.0222555
DENND5B DENN/MADD domain containing 5B 0.0221001
KLHL5 kelch-like family member 5 0.0219288
AKAP9 A kinase (PRKA) anchor protein 9 0.0217356
PTPRK protein tyrosine phosphatase, receptor type, K 0.0216531
CCSER1 coiled-coil serine-rich protein 1 0.0212671
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0211739
NOVA1 neuro-oncological ventral antigen 1 0.0211327
GPC6 glypican 6 0.0208985
RABGAP1L RAB GTPase activating protein 1-like 0.0208237
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 0.0206635
NRG1 neuregulin 1 0.0205375
RPS27 ribosomal protein S27 0.0202677
RPL35A ribosomal protein L35a 0.0202035
BICC1 BicC family RNA binding protein 1 0.0201425
RPL37A ribosomal protein L37a 0.0200038
CUX1 cut-like homeobox 1 0.0199724
WNK1 WNK lysine deficient protein kinase 1 0.0196367
TXNRD1 thioredoxin reductase 1 0.0193746
DST dystonin 0.0193237
ZFHX3 zinc finger homeobox 3 0.0192335
DNAH14 dynein, axonemal, heavy chain 14 0.0190599
NFE2L2 nuclear factor, erythroid 2-like 2 0.0187902
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0187253
PGRMC2 progesterone receptor membrane component 2 0.018713
RPS15 ribosomal protein S15 0.0184579
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0184242
DSTN destrin (actin depolymerizing factor) 0.0184149
RPL38 ribosomal protein L38 0.0182844
TCIM transcriptional and immune response regulator 0.0182101
LYST lysosomal trafficking regulator 0.0181787
AGPAT4 1-acylglycerol-3-phosphate O-acyltransferase 4 0.0181314
BPTF bromodomain PHD finger transcription factor 0.018129

decreased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase -0.107987
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0996052
FN1 fibronectin 1 -0.0882301
CXCL8 chemokine (C-X-C motif) ligand 8 -0.085631
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0771571
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0763333
HILPDA hypoxia inducible lipid droplet-associated -0.0681492
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0627333
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0617466
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0574757
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.055166
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0503569
NDRG1 N-myc downstream regulated 1 -0.0496507
SPAG9 sperm associated antigen 9 -0.0482109
FTH1 ferritin, heavy polypeptide 1 -0.0474519
RNF145 ring finger protein 145 -0.0469222
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0444294
ASPH aspartate beta-hydroxylase -0.0443339
PTMA prothymosin, alpha -0.0430091
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0428416
ELL2 elongation factor, RNA polymerase II, 2 -0.0418951
COPA coatomer protein complex, subunit alpha -0.0415675
SEPTIN7 septin 7 -0.0411622
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0409707
ZNF292 zinc finger protein 292 -0.0401755
SUCO SUN domain containing ossification factor -0.0395645
HELZ helicase with zinc finger -0.0392788
NUP58 nucleoporin 58 -0.0384877
RBM39 RNA binding motif protein 39 -0.0371149
WDR45B WD repeat domain 45B -0.0367281
FAM13A family with sequence similarity 13, member A -0.0364112
WAC WW domain containing adaptor with coiled-coil -0.03618
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0360427
TXNIP thioredoxin interacting protein -0.0356974
OGA O-GlcNAcase -0.0346768
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0345534
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0338811
TFG TRK-fused gene -0.033252
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0331758
ACBD3 acyl-CoA binding domain containing 3 -0.0327649
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0327161
PTK2 protein tyrosine kinase 2 -0.0320651
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0313346
KDM5B lysine (K)-specific demethylase 5B -0.0310777
RTN4 reticulon 4 -0.0307293
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0306399
XPO1 exportin 1 -0.0301364
KMT2E lysine (K)-specific methyltransferase 2E -0.0293822
CANX calnexin -0.0292095
PTPN14 protein tyrosine phosphatase, non-receptor type 14 -0.0291017
ANLN anillin, actin binding protein -0.0290315
USP3 ubiquitin specific peptidase 3 -0.0289204
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0288262
BIRC6 baculoviral IAP repeat containing 6 -0.0284831
EREG epiregulin -0.0282724
TPD52 tumor protein D52 -0.0280204
TM9SF3 transmembrane 9 superfamily member 3 -0.0279064
RAB6A RAB6A, member RAS oncogene family -0.0277513
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 -0.0275407
KMT2C lysine (K)-specific methyltransferase 2C -0.0274685
GOLGA4 golgin A4 -0.0273956
RNF24 ring finger protein 24 -0.0273264
FOSL1 FOS-like antigen 1 -0.0271511
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0270981
TENT2 terminal nucleotidyltransferase 2 -0.0267688
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0258914
TPM3 tropomyosin 3 -0.0258028
RAB1A RAB1A, member RAS oncogene family -0.0257228
CDC73 cell division cycle 73 -0.0256862
RLF rearranged L-myc fusion -0.0256854
SEC23A Sec23 homolog A (S. cerevisiae) -0.0254837
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0254811
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.025368
MARCHF6 membrane associated ring-CH-type finger 6 -0.0253582
YBX1 Y box binding protein 1 -0.0252515
CENPF centromere protein F, 350/400kDa -0.0252047
SOD2 superoxide dismutase 2, mitochondrial -0.0251977
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0249534
SETD5 SET domain containing 5 -0.0248586
BHLHE40 basic helix-loop-helix family, member e40 -0.0247667
NEK7 NIMA-related kinase 7 -0.0246424
CDC27 cell division cycle 27 -0.0244095
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0243156
QKI QKI, KH domain containing, RNA binding -0.0239149
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa -0.0236464
NOP58 NOP58 ribonucleoprotein -0.0233606
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0231608
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.023066
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme -0.0230453
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0229212
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.02282
PELO pelota homolog (Drosophila) -0.0225796
SMOX spermine oxidase -0.0219839
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0219776
INSIG2 insulin induced gene 2 -0.021958
TOP1 topoisomerase (DNA) I -0.021738
MIS18BP1 MIS18 binding protein 1 -0.0216845
HMGA1 high mobility group AT-hook 1 -0.0216255
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0216227
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.021584