| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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199 genes differentially expressed following the amikacin-1618 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABCA11P | ATP-binding cassette, sub-family A (ABC1), member 11, pseudogene |
| ADPRM | ADP-ribose/CDP-alcohol diphosphatase, manganese-dependent |
| ANKRD12 | ankyrin repeat domain 12 |
| ANXA6 | annexin A6 |
| ARFRP1 | ADP-ribosylation factor related protein 1 |
| ARIH2 | ariadne RBR E3 ubiquitin protein ligase 2 |
| ATM | ATM serine/threonine kinase |
| BCAP29 | B-cell receptor-associated protein 29 |
| BCLAF1 | BCL2-associated transcription factor 1 |
| BST1 | bone marrow stromal cell antigen 1 |
| CALM3 | calmodulin 3 (phosphorylase kinase, delta) |
| CAST | calpastatin |
| CBL | Cbl proto-oncogene, E3 ubiquitin protein ligase |
| CBLL1 | Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase |
| CBX6 | chromobox homolog 6 |
| CCNE2 | cyclin E2 |
| CD164 | CD164 molecule, sialomucin |
| CHEK1 | checkpoint kinase 1 |
| CITED2 | Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 |
| CNP | 2',3'-cyclic nucleotide 3' phosphodiesterase |
| CNPY3 | canopy FGF signaling regulator 3 |
| CRCP | CGRP receptor component |
| CSNK1G2 | casein kinase 1, gamma 2 |
| CSPP1 | centrosome and spindle pole associated protein 1 |
| DCTN4 | dynactin 4 (p62) |
| DDX31 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 |
| DERL2 | derlin 2 |
| DIMT1 | DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae) |
| DPYD | dihydropyrimidine dehydrogenase |
| DUS2 | dihydrouridine synthase 2 |
| DUSP2 | dual specificity phosphatase 2 |
| E2F1 | E2F transcription factor 1 |
| EGR3 | early growth response 3 |
| ERN2 | endoplasmic reticulum to nucleus signaling 2 |
| FAM153A | family with sequence similarity 153, member A |
| FAM188A | family with sequence similarity 188, member A |
| FASTK | Fas-activated serine/threonine kinase |
| FDX1 | ferredoxin 1 |
| FH | fumarate hydratase |
| FRMD8 | FERM domain containing 8 |
| GRK6 | G protein-coupled receptor kinase 6 |
| HIRA | histone cell cycle regulator |
| HSPA4 | heat shock 70kDa protein 4 |
| IKZF1 | IKAROS family zinc finger 1 (Ikaros) |
| IMPAD1 | inositol monophosphatase domain containing 1 |
| IVD | isovaleryl-CoA dehydrogenase |
| KPNA4 | karyopherin alpha 4 (importin alpha 3) |
| MAGOH2P | mago-nashi homolog 2, pseudogene |
| MAN1A1 | mannosidase, alpha, class 1A, member 1 |
| MGEA5 | meningioma expressed antigen 5 (hyaluronidase) |
| MLLT10 | myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 |
| MSH3 | mutS homolog 3 |
| MTRF1L | mitochondrial translational release factor 1-like |
| NACAP1 | nascent-polypeptide-associated complex alpha polypeptide pseudogene 1 |
| PAM | peptidylglycine alpha-amidating monooxygenase |
| PDCD4 | programmed cell death 4 (neoplastic transformation inhibitor) |
| PECAM1 | platelet/endothelial cell adhesion molecule 1 |
| PIK3CG | phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma |
| POLI | polymerase (DNA directed) iota |
| PPFIA1 | protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 |
| PTBP3 | polypyrimidine tract binding protein 3 |
| PTP4A1 | protein tyrosine phosphatase type IVA, member 1 |
| RAD1 | RAD1 checkpoint DNA exonuclease |
| RAD17 | RAD17 homolog (S. pombe) |
| RASSF4 | Ras association (RalGDS/AF-6) domain family member 4 |
| RBM3 | RNA binding motif (RNP1, RRM) protein 3 |
| RBMS1 | RNA binding motif, single stranded interacting protein 1 |
| RECQL4 | RecQ protein-like 4 |
| RHOF | ras homolog family member F (in filopodia) |
| RIOK3 | RIO kinase 3 |
| RP2 | retinitis pigmentosa 2 (X-linked recessive) |
| RPL7 | ribosomal protein L7 |
| RPS6KB1 | ribosomal protein S6 kinase, 70kDa, polypeptide 1 |
| RRP15 | ribosomal RNA processing 15 homolog (S. cerevisiae) |
| SLC25A40 | solute carrier family 25, member 40 |
| SLK | STE20-like kinase |
| SMARCA5 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 |
| SMIM7 | small integral membrane protein 7 |
| SOD2 | superoxide dismutase 2, mitochondrial |
| SPG7 | spastic paraplegia 7 (pure and complicated autosomal recessive) |
| SRSF11 | serine/arginine-rich splicing factor 11 |
| SSSCA1 | Sjogren syndrome/scleroderma autoantigen 1 |
| TAF1A | TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa |
| TCN1 | transcobalamin I (vitamin B12 binding protein, R binder family) |
| THTPA | thiamine triphosphatase |
| TPR | translocated promoter region, nuclear basket protein |
| UBE3A | ubiquitin protein ligase E3A |
| UBQLN4 | ubiquilin 4 |
| USF2 | upstream transcription factor 2, c-fos interacting |
| VPS13D | vacuolar protein sorting 13 homolog D (S. cerevisiae) |
| WDR82 | WD repeat domain 82 |
| YRDC | yrdC N(6)-threonylcarbamoyltransferase domain containing |
| ZC3H12A | zinc finger CCCH-type containing 12A |
| ZFYVE16 | zinc finger, FYVE domain containing 16 |
| ZMYM1 | zinc finger, MYM-type 1 |
| ZNF217 | zinc finger protein 217 |
| ZNF419 | zinc finger protein 419 |
| ZNF443 | zinc finger protein 443 |
| ZNF652 | zinc finger protein 652 |
| Symbol | Name |
|---|---|
| A1CF | APOBEC1 complementation factor |
| ACP2 | acid phosphatase 2, lysosomal |
| AMPD2 | adenosine monophosphate deaminase 2 |
| APEX2 | APEX nuclease (apurinic/apyrimidinic endonuclease) 2 |
| APOBR | apolipoprotein B receptor |
| ARAF | A-Raf proto-oncogene, serine/threonine kinase |
| ARMC7 | armadillo repeat containing 7 |
| ATAD2B | ATPase family, AAA domain containing 2B |
| BAP1 | BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase) |
| BCL2L14 | BCL2-like 14 (apoptosis facilitator) |
| C19ORF40 | chromosome 19 open reading frame 40 |
| CAPN15 | calpain 15 |
| CD82 | CD82 molecule |
| CER1 | cerberus 1, DAN family BMP antagonist |
| CHRNA6 | cholinergic receptor, nicotinic, alpha 6 (neuronal) |
| CRADD | CASP2 and RIPK1 domain containing adaptor with death domain |
| CSNK2A2 | casein kinase 2, alpha prime polypeptide |
| CST3 | cystatin C |
| CYB561D2 | cytochrome b561 family, member D2 |
| DCUN1D2 | DCN1, defective in cullin neddylation 1, domain containing 2 |
| DDIT3 | DNA-damage-inducible transcript 3 |
| DDX54 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 |
| DECR2 | 2,4-dienoyl CoA reductase 2, peroxisomal |
| EGR2 | early growth response 2 |
| ERAL1 | Era-like 12S mitochondrial rRNA chaperone 1 |
| FGR | FGR proto-oncogene, Src family tyrosine kinase |
| FMO4 | flavin containing monooxygenase 4 |
| GNPDA1 | glucosamine-6-phosphate deaminase 1 |
| GSTM1 | glutathione S-transferase mu 1 |
| HINFP | histone H4 transcription factor |
| IKZF5 | IKAROS family zinc finger 5 (Pegasus) |
| IL4R | interleukin 4 receptor |
| INPP5E | inositol polyphosphate-5-phosphatase, 72 kDa |
| IRF2 | interferon regulatory factor 2 |
| ITPKC | inositol-trisphosphate 3-kinase C |
| KIAA0556 | KIAA0556 |
| KIAA0753 | KIAA0753 |
| KIF3B | kinesin family member 3B |
| KRCC1 | lysine-rich coiled-coil 1 |
| LIMA1 | LIM domain and actin binding 1 |
| LRCH3 | leucine-rich repeats and calponin homology (CH) domain containing 3 |
| LRRC37A3 | leucine rich repeat containing 37, member A3 |
| MAD2L1BP | MAD2L1 binding protein |
| MAN2C1 | mannosidase, alpha, class 2C, member 1 |
| MAP3K11 | mitogen-activated protein kinase kinase kinase 11 |
| MAPK10 | mitogen-activated protein kinase 10 |
| MBIP | MAP3K12 binding inhibitory protein 1 |
| MED24 | mediator complex subunit 24 |
| METTL1 | methyltransferase like 1 |
| METTL22 | methyltransferase like 22 |
| MFSD12 | major facilitator superfamily domain containing 12 |
| MPP3 | membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3) |
| MUC3A | mucin 3A, cell surface associated |
| NUP93 | nucleoporin 93kDa |
| PAK1IP1 | PAK1 interacting protein 1 |
| PANK4 | pantothenate kinase 4 |
| PDXDC1 | pyridoxal-dependent decarboxylase domain containing 1 |
| PEX26 | peroxisomal biogenesis factor 26 |
| PHKG2 | phosphorylase kinase, gamma 2 (testis) |
| PIK3R5 | phosphoinositide-3-kinase, regulatory subunit 5 |
| PNPLA6 | patatin-like phospholipase domain containing 6 |
| PSKH1 | protein serine kinase H1 |
| PVRL2 | poliovirus receptor-related 2 (herpesvirus entry mediator B) |
| RAB1B | RAB1B, member RAS oncogene family |
| RAB4B | RAB4B, member RAS oncogene family |
| RNH1 | ribonuclease/angiogenin inhibitor 1 |
| RPL23AP32 | ribosomal protein L23a pseudogene 32 |
| RRP1 | ribosomal RNA processing 1 |
| SASH3 | SAM and SH3 domain containing 3 |
| SELP | selectin P (granule membrane protein 140kDa, antigen CD62) |
| SERTAD3 | SERTA domain containing 3 |
| SIRT6 | sirtuin 6 |
| SLC17A9 | solute carrier family 17 (vesicular nucleotide transporter), member 9 |
| SLC2A4RG | SLC2A4 regulator |
| SPX | spexin hormone |
| STEAP3 | STEAP family member 3, metalloreductase |
| STXBP2 | syntaxin binding protein 2 |
| TAF4B | TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa |
| TESK2 | testis-specific kinase 2 |
| TMA16 | translation machinery associated 16 homolog (S. cerevisiae) |
| TMEM115 | transmembrane protein 115 |
| TMEM53 | transmembrane protein 53 |
| TPCN1 | two pore segment channel 1 |
| TRPV2 | transient receptor potential cation channel, subfamily V, member 2 |
| TSPAN32 | tetraspanin 32 |
| TTC4 | tetratricopeptide repeat domain 4 |
| TUBA3C | tubulin, alpha 3c |
| UBE2NL | ubiquitin-conjugating enzyme E2N-like (gene/pseudogene) |
| UGDH | UDP-glucose 6-dehydrogenase |
| UPF3B | UPF3 regulator of nonsense transcripts homolog B (yeast) |
| USB1 | U6 snRNA biogenesis 1 |
| USP6 | ubiquitin specific peptidase 6 |
| VPS37B | vacuolar protein sorting 37 homolog B (S. cerevisiae) |
| VPS39 | vacuolar protein sorting 39 homolog (S. cerevisiae) |
| WDR47 | WD repeat domain 47 |
| WT1-AS | WT1 antisense RNA |
| XRCC2 | X-ray repair complementing defective repair in Chinese hamster cells 2 |
| ZNF189 | zinc finger protein 189 |
| ZNF692 | zinc finger protein 692 |
| ZW10 | zw10 kinetochore protein |
