apical Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
Description Apical is a geometric modifier describing the tip of a pyramidal or rounded structure. For example, lung apical. (Experimental Factor Ontology, EFO_0001653)
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Genes

291 genes co-occuring with the biological term apical in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ABCB11 ATP-binding cassette, sub-family B (MDR/TAP), member 11
ABCB4 ATP-binding cassette, sub-family B (MDR/TAP), member 4
ABCC1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1
ABCC2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4
ABCG1 ATP-binding cassette, sub-family G (WHITE), member 1
ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group)
ABCG5 ATP-binding cassette, sub-family G (WHITE), member 5
ABCG8 ATP-binding cassette, sub-family G (WHITE), member 8
ACE2 angiotensin I converting enzyme 2
ACTC1 actin, alpha, cardiac muscle 1
ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif, 13
AGER advanced glycosylation end product-specific receptor
ALPK1 alpha-kinase 1
ALPL alkaline phosphatase, liver/bone/kidney
ANO1 anoctamin 1, calcium activated chloride channel
ANXA2 annexin A2
APBA3 amyloid beta (A4) precursor protein-binding, family A, member 3
APC adenomatous polyposis coli
APOE apolipoprotein E
APP amyloid beta (A4) precursor protein
AQP1 aquaporin 1 (Colton blood group)
AQP2 aquaporin 2 (collecting duct)
AQP3 aquaporin 3 (Gill blood group)
AQP5 aquaporin 5
ARHGAP44 Rho GTPase activating protein 44
ARHGEF18 Rho/Rac guanine nucleotide exchange factor (GEF) 18
ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7
ATP12A ATPase, H+/K+ transporting, nongastric, alpha polypeptide
ATP1A1 ATPase, Na+/K+ transporting, alpha 1 polypeptide
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1
ATP2B2 ATPase, Ca++ transporting, plasma membrane 2
ATP7B ATPase, Cu++ transporting, beta polypeptide
ATP8B1 ATPase, aminophospholipid transporter, class I, type 8B, member 1
B2M beta-2-microglobulin
BCR breakpoint cluster region
BST2 bone marrow stromal cell antigen 2
C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
CACNA1D calcium channel, voltage-dependent, L type, alpha 1D subunit
CADM3 cell adhesion molecule 3
CASP3 caspase 3, apoptosis-related cysteine peptidase
CASP8 caspase 8, apoptosis-related cysteine peptidase
CASP9 caspase 9, apoptosis-related cysteine peptidase
CCT2 chaperonin containing TCP1, subunit 2 (beta)
CD1D CD1d molecule
CD24 CD24 molecule
CD44 CD44 molecule (Indian blood group)
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group)
CDC42 cell division cycle 42
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CDH3 cadherin 3, type 1, P-cadherin (placental)
CDK1 cyclin-dependent kinase 1
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
CDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)
CEP164 centrosomal protein 164kDa
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
CHAT choline O-acetyltransferase
CLDN1 claudin 1
CLDN5 claudin 5
CLIC1 chloride intracellular channel 1
CNTNAP2 contactin associated protein-like 2
CRB1 crumbs family member 1, photoreceptor morphogenesis associated
CRB3 crumbs family member 3
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CTTN cortactin
CXADR coxsackie virus and adenovirus receptor
CXCL8 chemokine (C-X-C motif) ligand 8
CXCR1 chemokine (C-X-C motif) receptor 1
DBN1 drebrin 1
DLL1 delta-like 1 (Drosophila)
DPP4 dipeptidyl-peptidase 4
DUOX2 dual oxidase 2
DYNLT1 dynein, light chain, Tctex-type 1
DYSF dysferlin
EPB41L5 erythrocyte membrane protein band 4.1 like 5
EPCAM epithelial cell adhesion molecule
ERBB2 erb-b2 receptor tyrosine kinase 2
ERBB3 erb-b2 receptor tyrosine kinase 3
EREG epiregulin
ERP29 endoplasmic reticulum protein 29
EZR ezrin
F11R F11 receptor
FASLG Fas ligand (TNF superfamily, member 6)
FCGR2A Fc fragment of IgG, low affinity IIa, receptor (CD32)
FCGR3A Fc fragment of IgG, low affinity IIIa, receptor (CD16a)
FCGR3B Fc fragment of IgG, low affinity IIIb, receptor (CD16b)
FCGRT Fc fragment of IgG, receptor, transporter, alpha
FGF2 fibroblast growth factor 2 (basic)
GNB2L1 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
GP2 glycoprotein 2 (zymogen granule membrane)
GP6 glycoprotein VI (platelet)
GPA33 glycoprotein A33 (transmembrane)
GPSM2 G-protein signaling modulator 2
HAX1 HCLS1 associated protein X-1
HEXIM1 hexamethylene bis-acetamide inducible 1
HFE hemochromatosis
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1
HSPB2 heat shock 27kDa protein 2
HSPD1 heat shock 60kDa protein 1 (chaperonin)
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase
HVCN1 hydrogen voltage gated channel 1
IGF2R insulin-like growth factor 2 receptor
IL10RA interleukin 10 receptor, alpha
IL1B interleukin 1, beta
IL1RN interleukin 1 receptor antagonist
INADL InaD-like (Drosophila)
ITGA6 integrin, alpha 6
KCNE1 potassium channel, voltage gated subfamily E regulatory beta subunit 1
KCNK1 potassium channel, two pore domain subfamily K, member 1
KCNK2 potassium channel, two pore domain subfamily K, member 2
KCNK5 potassium channel, two pore domain subfamily K, member 5
KCNK6 potassium channel, two pore domain subfamily K, member 6
KCNN4 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 4
KDM2A lysine (K)-specific demethylase 2A
KIF16B kinesin family member 16B
KIF17 kinesin family member 17
KIF5B kinesin family member 5B
KLK3 kallikrein-related peptidase 3
KRT18 keratin 18, type I
KRT8 keratin 8, type II
LCN2 lipocalin 2
LDLRAP1 low density lipoprotein receptor adaptor protein 1
LEPR leptin receptor
LGALS4 lectin, galactoside-binding, soluble, 4
MAGI1 membrane associated guanylate kinase, WW and PDZ domain containing 1
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene)
MAMDC4 MAM domain containing 4
MAPRE3 microtubule-associated protein, RP/EB family, member 3
MCL1 myeloid cell leukemia 1
MLLT4 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4
MPDZ multiple PDZ domain protein
MPP5 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
MUC1 mucin 1, cell surface associated
MUC16 mucin 16, cell surface associated
MUC17 mucin 17, cell surface associated
MYO1B myosin IB
MYO5B myosin VB
NOS2 nitric oxide synthase 2, inducible
NOS3 nitric oxide synthase 3 (endothelial cell)
NUMB numb homolog (Drosophila)
OSM oncostatin M
P2RX7 purinergic receptor P2X, ligand gated ion channel, 7
P2RY11 purinergic receptor P2Y, G-protein coupled, 11
P2RY2 purinergic receptor P2Y, G-protein coupled, 2
P2RY6 pyrimidinergic receptor P2Y, G-protein coupled, 6
PAK4 p21 protein (Cdc42/Rac)-activated kinase 4
PARD3 par-3 family cell polarity regulator
PARD6A par-6 family cell polarity regulator alpha
PARD6B par-6 family cell polarity regulator beta
PAX6 paired box 6
PDCD5 programmed cell death 5
PDE4D phosphodiesterase 4D, cAMP-specific
PDPK1 3-phosphoinositide dependent protein kinase 1
PDZK1 PDZ domain containing 1
PIGR polymeric immunoglobulin receptor
PKN2 protein kinase N2
PLAC1 placenta-specific 1
PLEKHA8 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8
PLEKHG6 pleckstrin homology domain containing, family G (with RhoGef domain) member 6
PODXL podocalyxin-like
PRKAA1 protein kinase, AMP-activated, alpha 1 catalytic subunit
PRKAB1 protein kinase, AMP-activated, beta 1 non-catalytic subunit
PRKAG1 protein kinase, AMP-activated, gamma 1 non-catalytic subunit
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha
PRKAR2A protein kinase, cAMP-dependent, regulatory, type II, alpha
PRKCB protein kinase C, beta
PRKCI protein kinase C, iota
PRKD1 protein kinase D1
PRNP prion protein
PROM1 prominin 1
PRSS8 protease, serine, 8
PTH parathyroid hormone
PVRL1 poliovirus receptor-related 1 (herpesvirus entry mediator C)
RAB11A RAB11A, member RAS oncogene family
RAB11B RAB11B, member RAS oncogene family
RAB11FIP2 RAB11 family interacting protein 2 (class I)
RAB11FIP5 RAB11 family interacting protein 5 (class I)
RAB13 RAB13, member RAS oncogene family
RAB8A RAB8A, member RAS oncogene family
RAP1A RAP1A, member of RAS oncogene family
RAP2A RAP2A, member of RAS oncogene family
RAP2C RAP2C, member of RAS oncogene family
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2
RAPGEF3 Rap guanine nucleotide exchange factor (GEF) 3
RB1CC1 RB1-inducible coiled-coil 1
RDX radixin
RHOA ras homolog family member A
RND3 Rho family GTPase 3
ROCK1 Rho-associated, coiled-coil containing protein kinase 1
ROCK2 Rho-associated, coiled-coil containing protein kinase 2
SCNN1A sodium channel, non voltage gated 1 alpha subunit
SCNN1G sodium channel, non voltage gated 1 gamma subunit
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9
SGK1 serum/glucocorticoid regulated kinase 1
SHANK2 SH3 and multiple ankyrin repeat domains 2
SI sucrase-isomaltase (alpha-glucosidase)
SLC11A2 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2
SLC12A1 solute carrier family 12 (sodium/potassium/chloride transporter), member 1
SLC12A7 solute carrier family 12 (potassium/chloride transporter), member 7
SLC16A1 solute carrier family 16 (monocarboxylate transporter), member 1
SLC19A2 solute carrier family 19 (thiamine transporter), member 2
SLC22A11 solute carrier family 22 (organic anion/urate transporter), member 11
SLC22A12 solute carrier family 22 (organic anion/urate transporter), member 12
SLC22A4 solute carrier family 22 (organic cation/zwitterion transporter), member 4
SLC22A5 solute carrier family 22 (organic cation/carnitine transporter), member 5
SLC22A9 solute carrier family 22 (organic anion transporter), member 9
SLC23A1 solute carrier family 23 (ascorbic acid transporter), member 1
SLC23A2 solute carrier family 23 (ascorbic acid transporter), member 2
SLC26A3 solute carrier family 26 (anion exchanger), member 3
SLC26A4 solute carrier family 26 (anion exchanger), member 4
SLC26A6 solute carrier family 26 (anion exchanger), member 6
SLC26A9 solute carrier family 26 (anion exchanger), member 9
SLC28A1 solute carrier family 28 (concentrative nucleoside transporter), member 1
SLC28A3 solute carrier family 28 (concentrative nucleoside transporter), member 3
SLC29A1 solute carrier family 29 (equilibrative nucleoside transporter), member 1
SLC29A2 solute carrier family 29 (equilibrative nucleoside transporter), member 2
SLC29A4 solute carrier family 29 (equilibrative nucleoside transporter), member 4
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1
SLC2A12 solute carrier family 2 (facilitated glucose transporter), member 12
SLC2A2 solute carrier family 2 (facilitated glucose transporter), member 2
SLC2A5 solute carrier family 2 (facilitated glucose/fructose transporter), member 5
SLC2A9 solute carrier family 2 (facilitated glucose transporter), member 9
SLC30A2 solute carrier family 30 (zinc transporter), member 2
SLC30A5 solute carrier family 30 (zinc transporter), member 5
SLC31A1 solute carrier family 31 (copper transporter), member 1
SLC34A1 solute carrier family 34 (type II sodium/phosphate cotransporter), member 1
SLC34A3 solute carrier family 34 (type II sodium/phosphate cotransporter), member 3
SLC36A1 solute carrier family 36 (proton/amino acid symporter), member 1
SLC36A3 solute carrier family 36, member 3
SLC3A1 solute carrier family 3 (amino acid transporter heavy chain), member 1
SLC40A1 solute carrier family 40 (iron-regulated transporter), member 1
SLC52A3 solute carrier family 52 (riboflavin transporter), member 3
SLC5A1 solute carrier family 5 (sodium/glucose cotransporter), member 1
SLC5A8 solute carrier family 5 (sodium/monocarboxylate cotransporter), member 8
SLC6A19 solute carrier family 6 (neutral amino acid transporter), member 19
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6
SLC7A9 solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1
SLC9A2 solute carrier family 9, subfamily A (NHE2, cation proton antiporter 2), member 2
SLC9A3 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3
SLC9A3R1 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1
SLC9A3R2 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2
SLC9A6 solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6
SLCO1A2 solute carrier organic anion transporter family, member 1A2
SLCO2B1 solute carrier organic anion transporter family, member 2B1
SLK STE20-like kinase
SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
SNX18 sorting nexin 18
SSFA2 sperm specific antigen 2
SST somatostatin
ST14 suppression of tumorigenicity 14 (colon carcinoma)
STK10 serine/threonine kinase 10
STK11 serine/threonine kinase 11
STX1A syntaxin 1A (brain)
STX2 syntaxin 2
STX3 syntaxin 3
STXBP2 syntaxin binding protein 2
SYT1 synaptotagmin I
TAOK2 TAO kinase 2
TCHP trichoplein, keratin filament binding
TFRC transferrin receptor
TGFBR2 transforming growth factor, beta receptor II (70/80kDa)
TGM2 transglutaminase 2
TJP1 tight junction protein 1
TJP2 tight junction protein 2
TLR2 toll-like receptor 2
TLR5 toll-like receptor 5
TMPRSS2 transmembrane protease, serine 2
TNFRSF11A tumor necrosis factor receptor superfamily, member 11a, NFKB activator
TNFSF11 tumor necrosis factor (ligand) superfamily, member 11
TP53 tumor protein p53
TP63 tumor protein p63
TPO thyroid peroxidase
TRPC1 transient receptor potential cation channel, subfamily C, member 1
TRPC3 transient receptor potential cation channel, subfamily C, member 3
TRPC6 transient receptor potential cation channel, subfamily C, member 6
TRPM6 transient receptor potential cation channel, subfamily M, member 6
TRPM8 transient receptor potential cation channel, subfamily M, member 8
TRPV5 transient receptor potential cation channel, subfamily V, member 5
TRPV6 transient receptor potential cation channel, subfamily V, member 6
UBE3A ubiquitin protein ligase E3A
VASP vasodilator-stimulated phosphoprotein
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor
WDR83 WD repeat domain 83
WNT3 wingless-type MMTV integration site family, member 3
WWC1 WW and C2 domain containing 1
WWOX WW domain containing oxidoreductase
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase