app Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
Description amyloid beta (A4) precursor protein|This gene encodes a cell surface receptor and transmembrane precursor protein that is cleaved by secretases to form a number of peptides. Some of these peptides are secreted and can bind to the acetyltransferase complex APBB1/TIP60 to promote transcriptional activation, while others form the protein basis of the amyloid plaques found in the brains of patients with Alzheimer disease. In addition, two of the peptides are antimicrobial peptides, having been shown to have bacteriocidal and antifungal activities. Mutations in this gene have been implicated in autosomal dominant Alzheimer disease and cerebroarterial amyloidosis (cerebral amyloid angiopathy). Multiple transcript variants encoding several different isoforms have been found for this gene. [provided by RefSeq, Aug 2014] (NCBI Entrez Gene Database, 351)
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Genes

143 genes co-occuring with the biological term app in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ACE angiotensin I converting enzyme
ACHE acetylcholinesterase (Yt blood group)
ACO1 aconitase 1, soluble
ADAM10 ADAM metallopeptidase domain 10
ADAM17 ADAM metallopeptidase domain 17
AKT1 v-akt murine thymoma viral oncogene homolog 1
ANXA4 annexin A4
APBA1 amyloid beta (A4) precursor protein-binding, family A, member 1
APBA2 amyloid beta (A4) precursor protein-binding, family A, member 2
APBA3 amyloid beta (A4) precursor protein-binding, family A, member 3
APBB1 amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2
APH1A APH1A gamma secretase subunit
APLP1 amyloid beta (A4) precursor-like protein 1
APLP2 amyloid beta (A4) precursor-like protein 2
APOE apolipoprotein E
APP amyloid beta (A4) precursor protein
ARRB2 arrestin, beta 2
ATXN1 ataxin 1
BACE1 beta-site APP-cleaving enzyme 1
BACE2 beta-site APP-cleaving enzyme 2
BAX BCL2-associated X protein
BECN1 beclin 1, autophagy related
CAPN1 calpain 1, (mu/I) large subunit
CASP1 caspase 1, apoptosis-related cysteine peptidase
CCL2 chemokine (C-C motif) ligand 2
CD14 CD14 molecule
CGB5 chorionic gonadotropin, beta polypeptide 5
CHAT choline O-acetyltransferase
CHRNA3 cholinergic receptor, nicotinic, alpha 3 (neuronal)
CHRNA7 cholinergic receptor, nicotinic, alpha 7 (neuronal)
COPS5 COP9 signalosome subunit 5
CSF2 colony stimulating factor 2 (granulocyte-macrophage)
CST3 cystatin C
CTSB cathepsin B
CTSD cathepsin D
CUTA cutA divalent cation tolerance homolog (E. coli)
DAB1 Dab, reelin signal transducer, homolog 1 (Drosophila)
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6
DNM2 dynamin 2
DNMBP dynamin binding protein
DPYSL2 dihydropyrimidinase-like 2
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
EGFR epidermal growth factor receptor
EIF4A1 eukaryotic translation initiation factor 4A1
ENPEP glutamyl aminopeptidase (aminopeptidase A)
F12 coagulation factor XII (Hageman factor)
FBXL2 F-box and leucine-rich repeat protein 2
FLOT1 flotillin 1
FLOT2 flotillin 2
FMR1 fragile X mental retardation 1
FYN FYN proto-oncogene, Src family tyrosine kinase
GAS1 growth arrest-specific 1
GGA1 golgi-associated, gamma adaptin ear containing, ARF binding protein 1
GGA3 golgi-associated, gamma adaptin ear containing, ARF binding protein 3
GPR3 G protein-coupled receptor 3
GRM3 glutamate receptor, metabotropic 3
GSK3B glycogen synthase kinase 3 beta
GULP1 GULP, engulfment adaptor PTB domain containing 1
HAP1 huntingtin-associated protein 1
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2)
HSPD1 heat shock 60kDa protein 1 (chaperonin)
HTRA2 HtrA serine peptidase 2
IGF1 insulin-like growth factor 1 (somatomedin C)
IL1R2 interleukin 1 receptor, type II
IL1RN interleukin 1 receptor antagonist
ITM2B integral membrane protein 2B
KAT5 K(lysine) acetyltransferase 5
KLC1 kinesin light chain 1
LDLR low density lipoprotein receptor
LRP1 low density lipoprotein receptor-related protein 1
LRP10 low density lipoprotein receptor-related protein 10
LRP1B low density lipoprotein receptor-related protein 1B
LRP8 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
LRRTM3 leucine rich repeat transmembrane neuronal 3
MAPK8IP1 mitogen-activated protein kinase 8 interacting protein 1
MAPT microtubule-associated protein tau
MED12 mediator complex subunit 12
MEP1B meprin A, beta
MIR101-1 microRNA 101-1
MIR124-1 microRNA 124-1
MYH10 myosin, heavy chain 10, non-muscle
NCAM1 neural cell adhesion molecule 1
NCSTN nicastrin
NECAB3 N-terminal EF-hand calcium binding protein 3
NEWENTRY Record to support submission of GeneRIFs for a gene not in Gene (human; man).
NFIL3 nuclear factor, interleukin 3 regulated
NME2 NME/NM23 nucleoside diphosphate kinase 2
NOS3 nitric oxide synthase 3 (endothelial cell)
NOTCH1 notch 1
NPC1 Niemann-Pick disease, type C1
OCIAD2 OCIA domain containing 2
OPRD1 opioid receptor, delta 1
PCSK9 proprotein convertase subtilisin/kexin type 9
PDE5A phosphodiesterase 5A, cGMP-specific
PICALM phosphatidylinositol binding clathrin assembly protein
PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1
PLD3 phospholipase D family, member 3
PPARG peroxisome proliferator-activated receptor gamma
PRKCA protein kinase C, alpha
PRKCE protein kinase C, epsilon
PRNP prion protein
PSEN1 presenilin 1
PSEN2 presenilin 2
PSENEN presenilin enhancer gamma secretase subunit
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
RAB3A RAB3A, member RAS oncogene family
RAB5A RAB5A, member RAS oncogene family
RAB6A RAB6A, member RAS oncogene family
RANBP9 RAN binding protein 9
RBPJ recombination signal binding protein for immunoglobulin kappa J region
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A
RELN reelin
ROCK2 Rho-associated, coiled-coil containing protein kinase 2
RTN4 reticulon 4
S100A9 S100 calcium binding protein A9
S100B S100 calcium binding protein B
SHC1 SHC (Src homology 2 domain containing) transforming protein 1
SLC36A1 solute carrier family 36 (proton/amino acid symporter), member 1
SNX33 sorting nexin 33
SNX6 sorting nexin 6
SOD1 superoxide dismutase 1, soluble
SORL1 sortilin-related receptor, L(DLR class) A repeats containing
SORT1 sortilin 1
SP1 Sp1 transcription factor
STX1A syntaxin 1A (brain)
STXBP1 syntaxin binding protein 1
SYVN1 synovial apoptosis inhibitor 1, synoviolin
TFAP2A transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
TGFBR2 transforming growth factor, beta receptor II (70/80kDa)
TM2D1 TM2 domain containing 1
TNF tumor necrosis factor
TNFRSF21 tumor necrosis factor receptor superfamily, member 21
TP53BP2 tumor protein p53 binding protein 2
TSPAN12 tetraspanin 12
UBQLN1 ubiquilin 1
VDAC1 voltage-dependent anion channel 1
VEGFA vascular endothelial growth factor A
VPS35 vacuolar protein sorting 35 homolog (S. cerevisiae)
VRK1 vaccinia related kinase 1
XPNPEP1 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
XPNPEP2 X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound
ZC3H12A zinc finger CCCH-type containing 12A