atrx Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
Description alpha thalassemia/mental retardation syndrome X-linked|The protein encoded by this gene contains an ATPase/helicase domain, and thus it belongs to the SWI/SNF family of chromatin remodeling proteins. This protein is found to undergo cell cycle-dependent phosphorylation, which regulates its nuclear matrix and chromatin association, and suggests its involvement in the gene regulation at interphase and chromosomal segregation in mitosis. Mutations in this gene are associated with an X-linked mental retardation (XLMR) syndrome most often accompanied by alpha-thalassemia (ATRX) syndrome. These mutations have been shown to cause diverse changes in the pattern of DNA methylation, which may provide a link between chromatin remodeling, DNA methylation, and gene expression in developmental processes. Multiple alternatively spliced transcript variants encoding distinct isoforms have been reported. [provided by RefSeq, Aug 2013] (NCBI Entrez Gene Database, 546)
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Genes

15 genes co-occuring with the biological term atrx in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ATRX alpha thalassemia/mental retardation syndrome X-linked
CHGA chromogranin A
CHGB chromogranin B
DAXX death-domain associated protein
H2AFY H2A histone family, member Y
HBA2 hemoglobin, alpha 2
MAGT1 magnesium transporter 1
MECP2 methyl CpG binding protein 2
MEN1 multiple endocrine neoplasia I
MIR200A microRNA 200a
MIR200C microRNA 200c
PQBP1 polyglutamine binding protein 1
PTEN phosphatase and tensin homolog
SLC6A8 solute carrier family 6 (neurotransmitter transporter), member 8
TP53 tumor protein p53