autophagy Gene Set

Dataset Phosphosite Textmining Biological Term Annotations
Category structural or functional annotations
Type biological term
Description The process in which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation. (Gene Ontology, GO_0006914)
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Genes

82 proteins co-occuring with the biological term autophagy in abstracts of publications describing phosphosites from the Phosphosite Textmining Biological Term Annotations dataset.

Symbol Name
ACACA acetyl-CoA carboxylase alpha
AKT1 v-akt murine thymoma viral oncogene homolog 1
AMBRA1 autophagy/beclin-1 regulator 1
ANXA7 annexin A7
ATG13 autophagy related 13
ATG5 autophagy related 5
BCL2 B-cell CLL/lymphoma 2
BCL2L11 BCL2-like 11 (apoptosis facilitator)
BECN1 beclin 1, autophagy related
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3
BRCA1 breast cancer 1, early onset
CDK1 cyclin-dependent kinase 1
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
DAP death-associated protein
DAPK1 death-associated protein kinase 1
DEPTOR DEP domain containing MTOR-interacting protein
DNM1L dynamin 1-like
EEF2K eukaryotic elongation factor 2 kinase
EGFR epidermal growth factor receptor
EIF2S1 eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1
FOXO3 forkhead box O3
GSK3B glycogen synthase kinase 3 beta
H2AFX H2A histone family, member X
HDAC4 histone deacetylase 4
HSPB6 heat shock protein, alpha-crystallin-related, B6
HTT huntingtin
INSR insulin receptor
IRF3 interferon regulatory factor 3
IRS1 insulin receptor substrate 1
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1
JUN jun proto-oncogene
KAT5 K(lysine) acetyltransferase 5
LGALS3 lectin, galactoside-binding, soluble, 3
LPIN1 lipin 1
MAP1LC3A microtubule-associated protein 1 light chain 3 alpha
MAP1LC3B microtubule-associated protein 1 light chain 3 beta
MAP2K1 mitogen-activated protein kinase kinase 1
MAPK1 mitogen-activated protein kinase 1
MAPK14 mitogen-activated protein kinase 14
MAPK3 mitogen-activated protein kinase 3
MAPK8 mitogen-activated protein kinase 8
MAPT microtubule-associated protein tau
MTOR mechanistic target of rapamycin (serine/threonine kinase)
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NFKB2 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha
OPTN optineurin
PARK2 parkin RBR E3 ubiquitin protein ligase
PDPK1 3-phosphoinositide dependent protein kinase 1
PEA15 phosphoprotein enriched in astrocytes 15
PIK3C3 phosphatidylinositol 3-kinase, catalytic subunit type 3
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta)
PRKAA1 protein kinase, AMP-activated, alpha 1 catalytic subunit
PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit
PRKAB1 protein kinase, AMP-activated, beta 1 non-catalytic subunit
PTK2 protein tyrosine kinase 2
RAF1 Raf-1 proto-oncogene, serine/threonine kinase
RAG1 recombination activating gene 1
RB1 retinoblastoma 1
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A
RGS19 regulator of G-protein signaling 19
RHOT1 ras homolog family member T1
RHOT2 ras homolog family member T2
RPS6 ribosomal protein S6
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1
RPTOR regulatory associated protein of MTOR, complex 1
SDCBP syndecan binding protein (syntenin)
SH3GLB1 SH3-domain GRB2-like endophilin B1
SIK2 salt-inducible kinase 2
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SNX18 sorting nexin 18
SQSTM1 sequestosome 1
SRC SRC proto-oncogene, non-receptor tyrosine kinase
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
TARDBP TAR DNA binding protein
TFEB transcription factor EB
TP53 tumor protein p53
TSC1 tuberous sclerosis 1
ULK1 unc-51 like autophagy activating kinase 1
XBP1 X-box binding protein 1