bacteria Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

191 genes co-occuring with the biological term bacteria in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase
ACAP1 ArfGAP with coiled-coil, ankyrin repeat and PH domains 1
ACSS2 acyl-CoA synthetase short-chain family member 2
ACTC1 actin, alpha, cardiac muscle 1
ACTN3 actinin, alpha 3 (gene/pseudogene)
ADAM17 ADAM metallopeptidase domain 17
ADM adrenomedullin
AKT1 v-akt murine thymoma viral oncogene homolog 1
ALPI alkaline phosphatase, intestinal
ANGPTL4 angiopoietin-like 4
APOC1 apolipoprotein C-I
ARF6 ADP-ribosylation factor 6
ARL8B ADP-ribosylation factor-like 8B
ATG16L1 autophagy related 16-like 1 (S. cerevisiae)
BCL2 B-cell CLL/lymphoma 2
BPI bactericidal/permeability-increasing protein
BPIFA1 BPI fold containing family A, member 1
C8A complement component 8, alpha polypeptide
C8B complement component 8, beta polypeptide
C8G complement component 8, gamma polypeptide
CALCOCO2 calcium binding and coiled-coil domain 2
CAMP cathelicidin antimicrobial peptide
CCL11 chemokine (C-C motif) ligand 11
CCL2 chemokine (C-C motif) ligand 2
CCL3 chemokine (C-C motif) ligand 3
CCR6 chemokine (C-C motif) receptor 6
CD14 CD14 molecule
CD1B CD1b molecule
CD209 CD209 molecule
CD36 CD36 molecule (thrombospondin receptor)
CD4 CD4 molecule
CD59 CD59 molecule, complement regulatory protein
CD86 CD86 molecule
CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)
CEACAM3 carcinoembryonic antigen-related cell adhesion molecule 3
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
CHGA chromogranin A
CIITA class II, major histocompatibility complex, transactivator
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
CR1 complement component (3b/4b) receptor 1 (Knops blood group)
CRP C-reactive protein, pentraxin-related
CSF2 colony stimulating factor 2 (granulocyte-macrophage)
CSF3 colony stimulating factor 3 (granulocyte)
CSN2 casein beta
CTTN cortactin
CXCL14 chemokine (C-X-C motif) ligand 14
CXCL8 chemokine (C-X-C motif) ligand 8
CXCL9 chemokine (C-X-C motif) ligand 9
DEFA3 defensin, alpha 3, neutrophil-specific
DEFA5 defensin, alpha 5, Paneth cell-specific
DEFA6 defensin, alpha 6, Paneth cell-specific
DEFB1 defensin, beta 1
DEFB103B defensin, beta 103B
DEFB104A defensin, beta 104A
DEFB105A defensin, beta 105A
DEFB105B defensin, beta 105B
DEFB4A defensin, beta 4A
DMBT1 deleted in malignant brain tumors 1
DUSP3 dual specificity phosphatase 3
EGFR epidermal growth factor receptor
ELANE elastase, neutrophil expressed
ENPP7 ectonucleotide pyrophosphatase/phosphodiesterase 7
F2 coagulation factor II (thrombin)
F2RL1 coagulation factor II (thrombin) receptor-like 1
FCGR2A Fc fragment of IgG, low affinity IIa, receptor (CD32)
FCN2 ficolin (collagen/fibrinogen domain containing lectin) 2
FN1 fibronectin 1
FOLR1 folate receptor 1 (adult)
FPR1 formyl peptide receptor 1
FPR2 formyl peptide receptor 2
GAS6 growth arrest-specific 6
GBP1 guanylate binding protein 1, interferon-inducible
GBP5 guanylate binding protein 5
GH1 growth hormone 1
GNLY granulysin
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HIST1H2BC histone cluster 1, H2bc
HIST1H2BE histone cluster 1, H2be
HIST1H2BF histone cluster 1, H2bf
HIST1H2BG histone cluster 1, H2bg
HIST1H2BI histone cluster 1, H2bi
HIST2H2BE histone cluster 2, H2be
HLA-B major histocompatibility complex, class I, B
HMGB1 high mobility group box 1
HSCB HscB mitochondrial iron-sulfur cluster co-chaperone
HSPA8 heat shock 70kDa protein 8
IAPP islet amyloid polypeptide
IFNB1 interferon, beta 1, fibroblast
IFNG interferon, gamma
IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
IL10 interleukin 10
IL13 interleukin 13
IL17A interleukin 17A
IL18 interleukin 18
IL1A interleukin 1, alpha
IL1B interleukin 1, beta
IL6 interleukin 6
IRAK4 interleukin-1 receptor-associated kinase 4
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
ITLN1 intelectin 1 (galactofuranose binding)
JUN jun proto-oncogene
KIF1A kinesin family member 1A
LCN2 lipocalin 2
LEAP2 liver expressed antimicrobial peptide 2
LPAR2 lysophosphatidic acid receptor 2
LTF lactotransferrin
LY96 lymphocyte antigen 96
MAPK1 mitogen-activated protein kinase 1
MAPK3 mitogen-activated protein kinase 3
MARCO macrophage receptor with collagenous structure
MARK2 MAP/microtubule affinity-regulating kinase 2
MBL2 mannose-binding lectin (protein C) 2, soluble
MIF macrophage migration inhibitory factor (glycosylation-inhibiting factor)
MIR106B microRNA 106b
MIR93 microRNA 93
MMP8 matrix metallopeptidase 8
MMP9 matrix metallopeptidase 9
MPO myeloperoxidase
MR1 major histocompatibility complex, class I-related
MSR1 macrophage scavenger receptor 1
MUC1 mucin 1, cell surface associated
MUC2 mucin 2, oligomeric mucus/gel-forming
MUC3 intestinal mucin-like
MUC5B mucin 5B, oligomeric mucus/gel-forming
MUC7 mucin 7, secreted
MYD88 myeloid differentiation primary response 88
MYLK myosin light chain kinase
NAIP NLR family, apoptosis inhibitory protein
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NLRC4 NLR family, CARD domain containing 4
NLRP3 NLR family, pyrin domain containing 3
NOD1 nucleotide-binding oligomerization domain containing 1
NOD2 nucleotide-binding oligomerization domain containing 2
NOS2 nitric oxide synthase 2, inducible
NPPB natriuretic peptide B
OLFM4 olfactomedin 4
OXR1 oxidation resistance 1
P2RX7 purinergic receptor P2X, ligand gated ion channel, 7
PGLYRP1 peptidoglycan recognition protein 1
PHGDH phosphoglycerate dehydrogenase
PI3 peptidase inhibitor 3, skin-derived
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid)
PLG plasminogen
PNPT1 polyribonucleotide nucleotidyltransferase 1
PON3 paraoxonase 3
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)
PRTN3 proteinase 3
PSENEN presenilin enhancer gamma secretase subunit
PTAFR platelet-activating factor receptor
RARRES2 retinoic acid receptor responder (tazarotene induced) 2
REG3A regenerating islet-derived 3 alpha
REG3G regenerating islet-derived 3 gamma
RNASE7 ribonuclease, RNase A family, 7
RNH1 ribonuclease/angiogenin inhibitor 1
S100A12 S100 calcium binding protein A12
S100A7 S100 calcium binding protein A7
S100A8 S100 calcium binding protein A8
S100A9 S100 calcium binding protein A9
SELP selectin P (granule membrane protein 140kDa, antigen CD62)
SFTPA1 surfactant protein A1
SLC11A1 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 1
SLC14A1 solute carrier family 14 (urea transporter), member 1 (Kidd blood group)
SLPI secretory leukocyte peptidase inhibitor
SOD3 superoxide dismutase 3, extracellular
SQSTM1 sequestosome 1
SSTR3 somatostatin receptor 3
STAT1 signal transducer and activator of transcription 1, 91kDa
SYK spleen tyrosine kinase
SYP synaptophysin
TAC1 tachykinin, precursor 1
TJP1 tight junction protein 1
TLR2 toll-like receptor 2
TLR4 toll-like receptor 4
TLR5 toll-like receptor 5
TLR7 toll-like receptor 7
TLR8 toll-like receptor 8
TLR9 toll-like receptor 9
TMPRSS13 transmembrane protease, serine 13
TNF tumor necrosis factor
TNFRSF1A tumor necrosis factor receptor superfamily, member 1A
TNFRSF6B tumor necrosis factor receptor superfamily, member 6b, decoy
TRABD2A TraB domain containing 2A
UCN2 urocortin 2
UCP2 uncoupling protein 2 (mitochondrial, proton carrier)
UMOD uromodulin
VTN vitronectin
WNT11 wingless-type MMTV integration site family, member 11
ZBP1 Z-DNA binding protein 1