bacterial vaginosis Gene Set

Dataset DISEASES Text-mining Gene-Disease Association Evidence Scores
Category disease or phenotype associations
Type disease
Description A vaginitis that is characterized by a grayish vaginal discharge usually of foul odor and the presence of Gardnerella vaginalis. (Human Disease Ontology, DOID_3385)
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Genes

85 genes co-occuring with the disease bacterial vaginosis in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

Symbol Name Standardized Value
FN1 fibronectin 1 1.54539
EZR ezrin 1.53084
SLPI secretory leukocyte peptidase inhibitor 1.4588
IL1B interleukin 1, beta 1.31231
PEPD peptidase D 1.21955
LAP3 leucine aminopeptidase 3 1.21262
SERPINH1 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) 1.18109
CXCL8 chemokine (C-X-C motif) ligand 8 1.12614
DEFB104A defensin, beta 104A 1.11898
IL1A interleukin 1, alpha 1.05303
IL6 interleukin 6 1.02229
CD4 CD4 molecule 0.925865
DEFA5 defensin, alpha 5, Paneth cell-specific 0.887208
SPTB spectrin, beta, erythrocytic 0.88516
TNF tumor necrosis factor 0.881472
TLR2 toll-like receptor 2 0.872462
EXTL3 exostosin-like glycosyltransferase 3 0.863456
PARK7 parkinson protein 7 0.856497
DEFB4A defensin, beta 4A 0.838885
TLR4 toll-like receptor 4 0.831508
URI1 URI1, prefoldin-like chaperone 0.820437
PRF1 perforin 1 (pore forming protein) 0.813462
TLR6 toll-like receptor 6 0.801974
FRRS1L ferric-chelate reductase 1-like 0.790081
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.739082
GLB1 galactosidase, beta 1 0.679499
OR6B2 olfactory receptor, family 6, subfamily B, member 2 0.676706
TLR1 toll-like receptor 1 0.662387
WNT10A wingless-type MMTV integration site family, member 10A 0.622575
CD79A CD79a molecule, immunoglobulin-associated alpha 0.618268
PRKACB protein kinase, cAMP-dependent, catalytic, beta 0.615138
DEFB104B defensin, beta 104B 0.614747
DEFB103A defensin, beta 103A 0.611229
IL1RN interleukin 1 receptor antagonist 0.607714
DEFB103B defensin, beta 103B 0.570718
LTF lactotransferrin 0.56722
AHR aryl hydrocarbon receptor 0.550522
HSPB7 heat shock 27kDa protein family, member 7 (cardiovascular) 0.53657
CRHBP corticotropin releasing hormone binding protein 0.531541
TNFRSF14 tumor necrosis factor receptor superfamily, member 14 0.530768
SIGIRR single immunoglobulin and toll-interleukin 1 receptor (TIR) domain 0.527676
CAT catalase 0.503824
NRIP1 nuclear receptor interacting protein 1 0.491978
ATAD2 ATPase family, AAA domain containing 2 0.485125
IL10 interleukin 10 0.472225
DDX53 DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 0.455224
LY96 lymphocyte antigen 96 0.449194
OR10T2 olfactory receptor, family 10, subfamily T, member 2 0.427015
CD59 CD59 molecule, complement regulatory protein 0.425514
MMP8 matrix metallopeptidase 8 0.397843
TRIM37 tripartite motif containing 37 0.387794
CRH corticotropin releasing hormone 0.38111
LARS leucyl-tRNA synthetase 0.378514
CXCL10 chemokine (C-X-C motif) ligand 10 0.374068
ATAD3A ATPase family, AAA domain containing 3A 0.361502
TIRAP toll-interleukin 1 receptor (TIR) domain containing adaptor protein 0.358183
IL1R2 interleukin 1 receptor, type II 0.352659
HEXDC hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing 0.320817
FPGS folylpolyglutamate synthase 0.299452
CRP C-reactive protein, pentraxin-related 0.29118
KLK15 kallikrein-related peptidase 15 0.290103
NAGLU N-acetylglucosaminidase, alpha 0.290103
PLA2G1B phospholipase A2, group IB (pancreas) 0.279724
OR10R2 olfactory receptor, family 10, subfamily R, member 2 0.275445
MPO myeloperoxidase 0.274376
CAMP cathelicidin antimicrobial peptide 0.274376
CD83 CD83 molecule 0.257005
GAB2 GRB2-associated binding protein 2 0.246799
CCR5 chemokine (C-C motif) receptor 5 (gene/pseudogene) 0.224884
OR10K1 olfactory receptor, family 10, subfamily K, member 1 0.222822
RER1 retention in endoplasmic reticulum sorting receptor 1 0.21974
LBP lipopolysaccharide binding protein 0.21974
IGFBP1 insulin-like growth factor binding protein 1 0.210589
OXTR oxytocin receptor 0.208245
MRPS7 mitochondrial ribosomal protein S7 0.205916
HSPA4 heat shock 70kDa protein 4 0.192971
FOXA1 forkhead box A1 0.189551
LOR loricrin 0.180652
CD69 CD69 molecule 0.175947
MYD88 myeloid differentiation primary response 88 0.174881
HN1 hematological and neurological expressed 1 0.173314
NDUFS3 NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase) 0.165217
TCHH trichohyalin 0.164359
BCKDHA branched chain keto acid dehydrogenase E1, alpha polypeptide 0.164149
LCK LCK proto-oncogene, Src family tyrosine kinase 0.158605