barr body Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A structure found in a female mammalian cell containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery. (Gene Ontology, GO_0001740)
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34 proteins co-occuring with the barr body cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
H2AFB2 H2A histone family, member B2 0.891631
ECEL1 endothelin converting enzyme-like 1 0.880094
SAP30 Sin3A-associated protein, 30kDa 0.745025
H2AFY2 H2A histone family, member Y2 0.729732
H2AFY H2A histone family, member Y 0.728389
SATB2 SATB homeobox 2 0.661208
HIST2H2AC histone cluster 2, H2ac 0.602752
HIST2H2AA3 histone cluster 2, H2aa3 0.602331
HIST2H2AA4 histone cluster 2, H2aa4 0.602331
HIST1H2AD histone cluster 1, H2ad 0.53454
HIST1H2AH histone cluster 1, H2ah 0.53454
HIST1H2AM histone cluster 1, H2am 0.53454
HIST1H2AJ histone cluster 1, H2aj 0.53454
H2AFJ H2A histone family, member J 0.53454
HIST1H2AG histone cluster 1, H2ag 0.533309
HIST1H2AB histone cluster 1, H2ab 0.530847
HIST1H2AE histone cluster 1, H2ae 0.530847
H2AFV H2A histone family, member V 0.530438
H2AFB1 H2A histone family, member B1 0.52716
SRY sex determining region Y 0.473617
SATB1 SATB homeobox 1 0.426711
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.395098
PTER phosphotriesterase related 0.390455
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.343042
FMR1 fragile X mental retardation 1 0.342664
SERPINA6 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6 0.328332
HPRT1 hypoxanthine phosphoribosyltransferase 1 0.257652
ACKR1 atypical chemokine receptor 1 (Duffy blood group) 0.250751
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.223143
HLA-DRB1 major histocompatibility complex, class II, DR beta 1 0.221378
CTCF CCCTC-binding factor (zinc finger protein) 0.189222
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.187646
G6PD glucose-6-phosphate dehydrogenase 0.170629
SHBG sex hormone-binding globulin 0.166167