| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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197 genes differentially expressed following the bergenin-3467 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ADAM22 | ADAM metallopeptidase domain 22 |
| APPBP2 | amyloid beta precursor protein (cytoplasmic tail) binding protein 2 |
| ARHGEF12 | Rho guanine nucleotide exchange factor (GEF) 12 |
| ATP2A2 | ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 |
| ATP2A3 | ATPase, Ca++ transporting, ubiquitous |
| ATXN7L3B | ataxin 7-like 3B |
| BTBD7 | BTB (POZ) domain containing 7 |
| C4ORF29 | chromosome 4 open reading frame 29 |
| CAMKK2 | calcium/calmodulin-dependent protein kinase kinase 2, beta |
| CASP2 | caspase 2, apoptosis-related cysteine peptidase |
| CCDC186 | coiled-coil domain containing 186 |
| CDC25A | cell division cycle 25A |
| CDC42EP2 | CDC42 effector protein (Rho GTPase binding) 2 |
| CDKAL1 | CDK5 regulatory subunit associated protein 1-like 1 |
| CFDP1 | craniofacial development protein 1 |
| CIDEC | cell death-inducing DFFA-like effector c |
| CLCF1 | cardiotrophin-like cytokine factor 1 |
| CLN8 | ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation) |
| CRMP1 | collapsin response mediator protein 1 |
| DCAF15 | DDB1 and CUL4 associated factor 15 |
| DHX34 | DEAH (Asp-Glu-Ala-His) box polypeptide 34 |
| ELAVL3 | ELAV like neuron-specific RNA binding protein 3 |
| EPOR | erythropoietin receptor |
| ERC2-IT1 | ERC2 intronic transcript 1 |
| FAM214B | family with sequence similarity 214, member B |
| FBLN1 | fibulin 1 |
| FBXL18 | F-box and leucine-rich repeat protein 18 |
| FBXL7 | F-box and leucine-rich repeat protein 7 |
| FHL1 | four and a half LIM domains 1 |
| FLJ11710 | uncharacterized protein FLJ11710 |
| FSCN1 | fascin actin-bundling protein 1 |
| GABBR2 | gamma-aminobutyric acid (GABA) B receptor, 2 |
| GAD1 | glutamate decarboxylase 1 (brain, 67kDa) |
| GAS7 | growth arrest-specific 7 |
| GGA1 | golgi-associated, gamma adaptin ear containing, ARF binding protein 1 |
| GINS4 | GINS complex subunit 4 (Sld5 homolog) |
| GLRX3 | glutaredoxin 3 |
| GM2A | GM2 ganglioside activator |
| GNL3L | guanine nucleotide binding protein-like 3 (nucleolar)-like |
| GNS | glucosamine (N-acetyl)-6-sulfatase |
| GUK1 | guanylate kinase 1 |
| HFE | hemochromatosis |
| IFNAR1 | interferon (alpha, beta and omega) receptor 1 |
| IGHA1 | immunoglobulin heavy constant alpha 1 |
| IL11 | interleukin 11 |
| IL1A | interleukin 1, alpha |
| IL6ST | interleukin 6 signal transducer |
| INPP4A | inositol polyphosphate-4-phosphatase, type I, 107kDa |
| JRK | Jrk homolog (mouse) |
| JUNB | jun B proto-oncogene |
| KCNH2 | potassium channel, voltage gated eag related subfamily H, member 2 |
| KITLG | KIT ligand |
| LAMP1 | lysosomal-associated membrane protein 1 |
| LRCH1 | leucine-rich repeats and calponin homology (CH) domain containing 1 |
| LRP12 | low density lipoprotein receptor-related protein 12 |
| MAFF | v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F |
| MAOB | monoamine oxidase B |
| MAPK13 | mitogen-activated protein kinase 13 |
| MED18 | mediator complex subunit 18 |
| MED6 | mediator complex subunit 6 |
| MEFV | Mediterranean fever |
| METTL7A | methyltransferase like 7A |
| NCOA2 | nuclear receptor coactivator 2 |
| NF1 | neurofibromin 1 |
| NF2 | neurofibromin 2 (merlin) |
| NGLY1 | N-glycanase 1 |
| NLRX1 | NLR family member X1 |
| NRF1 | nuclear respiratory factor 1 |
| OVOL1 | ovo-like zinc finger 1 |
| PHF20 | PHD finger protein 20 |
| PLCB1 | phospholipase C, beta 1 (phosphoinositide-specific) |
| PPIA | peptidylprolyl isomerase A (cyclophilin A) |
| PSMB2 | proteasome (prosome, macropain) subunit, beta type, 2 |
| PTHLH | parathyroid hormone-like hormone |
| PTPRS | protein tyrosine phosphatase, receptor type, S |
| RABGAP1 | RAB GTPase activating protein 1 |
| RB1 | retinoblastoma 1 |
| RNFT1 | ring finger protein, transmembrane 1 |
| RSPH14 | radial spoke head 14 homolog (Chlamydomonas) |
| SLC24A3 | solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 |
| SLC4A8 | solute carrier family 4, sodium bicarbonate cotransporter, member 8 |
| SLC7A2 | solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 |
| SOX9 | SRY (sex determining region Y)-box 9 |
| STARD3 | StAR-related lipid transfer (START) domain containing 3 |
| STRN3 | striatin, calmodulin binding protein 3 |
| SYMPK | symplekin |
| TGFB2 | transforming growth factor, beta 2 |
| TMEM242 | transmembrane protein 242 |
| TNPO2 | transportin 2 |
| TRIM36 | tripartite motif containing 36 |
| TRIO | trio Rho guanine nucleotide exchange factor |
| TTLL3 | tubulin tyrosine ligase-like family member 3 |
| UPK3B | uroplakin 3B |
| USP36 | ubiquitin specific peptidase 36 |
| XRCC2 | X-ray repair complementing defective repair in Chinese hamster cells 2 |
| ZNF287 | zinc finger protein 287 |
| ZNF652 | zinc finger protein 652 |
| ZNF862 | zinc finger protein 862 |
| Symbol | Name |
|---|---|
| ABHD4 | abhydrolase domain containing 4 |
| ABTB2 | ankyrin repeat and BTB (POZ) domain containing 2 |
| ADGRE5 | adhesion G protein-coupled receptor E5 |
| ALDOC | aldolase C, fructose-bisphosphate |
| ALS2CL | ALS2 C-terminal like |
| APBB3 | amyloid beta (A4) precursor protein-binding, family B, member 3 |
| ARHGEF10L | Rho guanine nucleotide exchange factor (GEF) 10-like |
| ARHGEF3 | Rho guanine nucleotide exchange factor (GEF) 3 |
| ARHGEF5 | Rho guanine nucleotide exchange factor (GEF) 5 |
| ATAD5 | ATPase family, AAA domain containing 5 |
| BAGE | B melanoma antigen |
| BGLAP | bone gamma-carboxyglutamate (gla) protein |
| C2ORF54 | chromosome 2 open reading frame 54 |
| C7ORF43 | chromosome 7 open reading frame 43 |
| CDK20 | cyclin-dependent kinase 20 |
| CDK3 | cyclin-dependent kinase 3 |
| CENPT | centromere protein T |
| CEP97 | centrosomal protein 97kDa |
| CHKB | choline kinase beta |
| CIC | capicua transcriptional repressor |
| CPPED1 | calcineurin-like phosphoesterase domain containing 1 |
| CTDNEP1 | CTD nuclear envelope phosphatase 1 |
| DDX54 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 |
| DEAF1 | DEAF1 transcription factor |
| DNM1 | dynamin 1 |
| DSCAM | Down syndrome cell adhesion molecule |
| DVL1 | dishevelled segment polarity protein 1 |
| E4F1 | E4F transcription factor 1 |
| EDAR | ectodysplasin A receptor |
| EHMT1 | euchromatic histone-lysine N-methyltransferase 1 |
| ENPEP | glutamyl aminopeptidase (aminopeptidase A) |
| FAM50B | family with sequence similarity 50, member B |
| FBXL15 | F-box and leucine-rich repeat protein 15 |
| FGF23 | fibroblast growth factor 23 |
| FMOD | fibromodulin |
| FUT1 | fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group) |
| GMIP | GEM interacting protein |
| GNG4 | guanine nucleotide binding protein (G protein), gamma 4 |
| GPATCH3 | G patch domain containing 3 |
| GSTM2 | glutathione S-transferase mu 2 (muscle) |
| HIST1H2AJ | histone cluster 1, H2aj |
| HLA-J | major histocompatibility complex, class I, J (pseudogene) |
| IGSF1 | immunoglobulin superfamily, member 1 |
| IPO8 | importin 8 |
| ITPKC | inositol-trisphosphate 3-kinase C |
| KCNK12 | potassium channel, two pore domain subfamily K, member 12 |
| KIF13B | kinesin family member 13B |
| KLK5 | kallikrein-related peptidase 5 |
| LMBR1L | limb development membrane protein 1-like |
| LPAR4 | lysophosphatidic acid receptor 4 |
| LRRC49 | leucine rich repeat containing 49 |
| MAST3 | microtubule associated serine/threonine kinase 3 |
| MBNL3 | muscleblind-like splicing regulator 3 |
| MBTD1 | mbt domain containing 1 |
| MECR | mitochondrial trans-2-enoyl-CoA reductase |
| MED9 | mediator complex subunit 9 |
| MT1HL1 | metallothionein 1H-like 1 |
| NRGN | neurogranin (protein kinase C substrate, RC3) |
| NT5E | 5'-nucleotidase, ecto (CD73) |
| NXPH4 | neurexophilin 4 |
| OR7E156P | olfactory receptor, family 7, subfamily E, member 156 pseudogene |
| PARP16 | poly (ADP-ribose) polymerase family, member 16 |
| PCSK7 | proprotein convertase subtilisin/kexin type 7 |
| PDE8B | phosphodiesterase 8B |
| PHC1 | polyhomeotic homolog 1 (Drosophila) |
| PIBF1 | progesterone immunomodulatory binding factor 1 |
| PITPNM1 | phosphatidylinositol transfer protein, membrane-associated 1 |
| PLCB3 | phospholipase C, beta 3 (phosphatidylinositol-specific) |
| PLEKHA6 | pleckstrin homology domain containing, family A member 6 |
| PLEKHO1 | pleckstrin homology domain containing, family O member 1 |
| PPT2 | palmitoyl-protein thioesterase 2 |
| PRRG2 | proline rich Gla (G-carboxyglutamic acid) 2 |
| RAD9A | RAD9 homolog A (S. pombe) |
| RNF126P1 | ring finger protein 126 pseudogene 1 |
| RRP9 | ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast) |
| SEC22A | SEC22 vesicle trafficking protein homolog A (S. cerevisiae) |
| SEMA4A | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A |
| SIX1 | SIX homeobox 1 |
| SLC22A14 | solute carrier family 22, member 14 |
| SLC26A6 | solute carrier family 26 (anion exchanger), member 6 |
| SLC35C1 | solute carrier family 35 (GDP-fucose transporter), member C1 |
| SLC46A3 | solute carrier family 46, member 3 |
| SLC9A1 | solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 |
| STAG3L1 | stromal antigen 3-like 1 (pseudogene) |
| THRAP3 | thyroid hormone receptor associated protein 3 |
| TMA16 | translation machinery associated 16 homolog (S. cerevisiae) |
| TMC5 | transmembrane channel-like 5 |
| TPST1 | tyrosylprotein sulfotransferase 1 |
| TRABD | TraB domain containing |
| TTBK2 | tau tubulin kinase 2 |
| UBQLN4 | ubiquilin 4 |
| UNC119 | unc-119 homolog (C. elegans) |
| VAX2 | ventral anterior homeobox 2 |
| VPS39 | vacuolar protein sorting 39 homolog (S. cerevisiae) |
| WDR25 | WD repeat domain 25 |
| XRCC1 | X-ray repair complementing defective repair in Chinese hamster cells 1 |
| ZNF211 | zinc finger protein 211 |
| ZNF212 | zinc finger protein 212 |
| ZNF778 | zinc finger protein 778 |
