| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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198 genes differentially expressed following the bergenin-5870 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ACTN2 | actinin, alpha 2 |
| ADGRL1 | adhesion G protein-coupled receptor L1 |
| AKAP5 | A kinase (PRKA) anchor protein 5 |
| ARMC4 | armadillo repeat containing 4 |
| ASIC3 | acid sensing (proton gated) ion channel 3 |
| B4GALT6 | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 |
| BMP7 | bone morphogenetic protein 7 |
| BTG2 | BTG family, member 2 |
| C17ORF53 | chromosome 17 open reading frame 53 |
| CAMK1 | calcium/calmodulin-dependent protein kinase I |
| CD58 | CD58 molecule |
| CD68 | CD68 molecule |
| CD70 | CD70 molecule |
| CDC25A | cell division cycle 25A |
| CDC42 | cell division cycle 42 |
| CEP295 | centrosomal protein 295kDa |
| CEP68 | centrosomal protein 68kDa |
| CLCA2 | chloride channel accessory 2 |
| CLDN17 | claudin 17 |
| CNTLN | centlein, centrosomal protein |
| COL11A2 | collagen, type XI, alpha 2 |
| COMT | catechol-O-methyltransferase |
| CUZD1 | CUB and zona pellucida-like domains 1 |
| ERN2 | endoplasmic reticulum to nucleus signaling 2 |
| FCER1G | Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide |
| GPC4 | glypican 4 |
| HIRA | histone cell cycle regulator |
| HIST1H4D | histone cluster 1, H4d |
| HIST1H4E | histone cluster 1, H4e |
| HOXB2 | homeobox B2 |
| KCND3 | potassium channel, voltage gated Shal related subfamily D, member 3 |
| KCNJ8 | potassium channel, inwardly rectifying subfamily J, member 8 |
| KIAA0922 | KIAA0922 |
| KIAA1107 | KIAA1107 |
| LDB3 | LIM domain binding 3 |
| LILRA2 | leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 |
| LMAN1 | lectin, mannose-binding, 1 |
| LMF1 | lipase maturation factor 1 |
| LMF2 | lipase maturation factor 2 |
| LMO7 | LIM domain 7 |
| LRRK1 | leucine-rich repeat kinase 1 |
| MANBA | mannosidase, beta A, lysosomal |
| MAP2K2 | mitogen-activated protein kinase kinase 2 |
| MDM2 | MDM2 proto-oncogene, E3 ubiquitin protein ligase |
| MFHAS1 | malignant fibrous histiocytoma amplified sequence 1 |
| MST1 | macrophage stimulating 1 |
| MYLK | myosin light chain kinase |
| N4BP2L1 | NEDD4 binding protein 2-like 1 |
| NCKIPSD | NCK interacting protein with SH3 domain |
| NCOR1 | nuclear receptor corepressor 1 |
| NDUFAF5 | NADH dehydrogenase (ubiquinone) complex I, assembly factor 5 |
| NDUFAF7 | NADH dehydrogenase (ubiquinone) complex I, assembly factor 7 |
| NEK11 | NIMA-related kinase 11 |
| NFKBIB | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta |
| NIPAL2 | NIPA-like domain containing 2 |
| NUDCD3 | NudC domain containing 3 |
| PAOX | polyamine oxidase (exo-N4-amino) |
| PARM1 | prostate androgen-regulated mucin-like protein 1 |
| PDE2A | phosphodiesterase 2A, cGMP-stimulated |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PMS2P4 | postmeiotic segregation increased 2 pseudogene 4 |
| PRTN3 | proteinase 3 |
| PTPN21 | protein tyrosine phosphatase, non-receptor type 21 |
| PTPRE | protein tyrosine phosphatase, receptor type, E |
| QKI | QKI, KH domain containing, RNA binding |
| RAD23B | RAD23 homolog B (S. cerevisiae) |
| RANGAP1 | Ran GTPase activating protein 1 |
| RHPN1-AS1 | RHPN1 antisense RNA 1 (head to head) |
| RNPEPL1 | arginyl aminopeptidase (aminopeptidase B)-like 1 |
| ROM1 | retinal outer segment membrane protein 1 |
| RPS3A | ribosomal protein S3A |
| RTEL1 | regulator of telomere elongation helicase 1 |
| SEMA5A | sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A |
| SERHL2 | serine hydrolase-like 2 |
| SLC35F6 | solute carrier family 35, member F6 |
| SLC43A1 | solute carrier family 43 (amino acid system L transporter), member 1 |
| SNW1 | SNW domain containing 1 |
| SOSTDC1 | sclerostin domain containing 1 |
| SPTAN1 | spectrin, alpha, non-erythrocytic 1 |
| SSTR2 | somatostatin receptor 2 |
| STK24 | serine/threonine kinase 24 |
| STX3 | syntaxin 3 |
| SULT2B1 | sulfotransferase family, cytosolic, 2B, member 1 |
| TBC1D2B | TBC1 domain family, member 2B |
| TLE4 | transducin-like enhancer of split 4 |
| TNFSF10 | tumor necrosis factor (ligand) superfamily, member 10 |
| TNFSF15 | tumor necrosis factor (ligand) superfamily, member 15 |
| TRPM4 | transient receptor potential cation channel, subfamily M, member 4 |
| TSPAN8 | tetraspanin 8 |
| TTF1 | transcription termination factor, RNA polymerase I |
| TUBA4B | tubulin, alpha 4b |
| USP5 | ubiquitin specific peptidase 5 (isopeptidase T) |
| UTRN | utrophin |
| VAMP2 | vesicle-associated membrane protein 2 (synaptobrevin 2) |
| WDR62 | WD repeat domain 62 |
| ZFHX2 | zinc finger homeobox 2 |
| ZFP36L2 | ZFP36 ring finger protein-like 2 |
| ZHX3 | zinc fingers and homeoboxes 3 |
| ZNF287 | zinc finger protein 287 |
| ZNF589 | zinc finger protein 589 |
| Symbol | Name |
|---|---|
| ABHD4 | abhydrolase domain containing 4 |
| ALG12 | ALG12, alpha-1,6-mannosyltransferase |
| AMDHD2 | amidohydrolase domain containing 2 |
| APLP1 | amyloid beta (A4) precursor-like protein 1 |
| APOLD1 | apolipoprotein L domain containing 1 |
| ASB7 | ankyrin repeat and SOCS box containing 7 |
| ATG16L1 | autophagy related 16-like 1 (S. cerevisiae) |
| C17ORF70 | chromosome 17 open reading frame 70 |
| C1ORF112 | chromosome 1 open reading frame 112 |
| C1ORF115 | chromosome 1 open reading frame 115 |
| C5 | complement component 5 |
| C6ORF47 | chromosome 6 open reading frame 47 |
| CDC42EP1 | CDC42 effector protein (Rho GTPase binding) 1 |
| CDON | cell adhesion associated, oncogene regulated |
| CHMP6 | charged multivesicular body protein 6 |
| CHST10 | carbohydrate sulfotransferase 10 |
| CLSPN | claspin |
| CTSD | cathepsin D |
| DCAF13 | DDB1 and CUL4 associated factor 13 |
| DCAF17 | DDB1 and CUL4 associated factor 17 |
| DDX60 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 |
| ECM1 | extracellular matrix protein 1 |
| EFNA3 | ephrin-A3 |
| FAM120C | family with sequence similarity 120C |
| FANCF | Fanconi anemia, complementation group F |
| FBXL15 | F-box and leucine-rich repeat protein 15 |
| FEM1C | fem-1 homolog c (C. elegans) |
| FKBPL | FK506 binding protein like |
| FRS3 | fibroblast growth factor receptor substrate 3 |
| GCHFR | GTP cyclohydrolase I feedback regulator |
| GLCE | glucuronic acid epimerase |
| GPATCH3 | G patch domain containing 3 |
| GPR137B | G protein-coupled receptor 137B |
| GTPBP2 | GTP binding protein 2 |
| HERC3 | HECT and RLD domain containing E3 ubiquitin protein ligase 3 |
| HIST1H1E | histone cluster 1, H1e |
| HIST1H2AI | histone cluster 1, H2ai |
| HIST1H2AJ | histone cluster 1, H2aj |
| HOXA1 | homeobox A1 |
| ITPKB | inositol-trisphosphate 3-kinase B |
| KCTD15 | potassium channel tetramerization domain containing 15 |
| KIAA0196 | KIAA0196 |
| KIAA0894 | KIAA0894 protein |
| KRT4 | keratin 4, type II |
| L2HGDH | L-2-hydroxyglutarate dehydrogenase |
| LIMS2 | LIM and senescent cell antigen-like domains 2 |
| LOC100286895 | cell division cycle 27 homolog pseudogene |
| LRP3 | low density lipoprotein receptor-related protein 3 |
| LRRC15 | leucine rich repeat containing 15 |
| LYPD3 | LY6/PLAUR domain containing 3 |
| MAN2C1 | mannosidase, alpha, class 2C, member 1 |
| MAP6D1 | MAP6 domain containing 1 |
| MED15 | mediator complex subunit 15 |
| MICAL1 | microtubule associated monooxygenase, calponin and LIM domain containing 1 |
| MKLN1 | muskelin 1, intracellular mediator containing kelch motifs |
| NSD1 | nuclear receptor binding SET domain protein 1 |
| OAS3 | 2'-5'-oligoadenylate synthetase 3, 100kDa |
| OCEL1 | occludin/ELL domain containing 1 |
| PDE12 | phosphodiesterase 12 |
| PHGDH | phosphoglycerate dehydrogenase |
| PRPH | peripherin |
| PRSS16 | protease, serine, 16 (thymus) |
| PSMB8 | proteasome (prosome, macropain) subunit, beta type, 8 |
| PTGER2 | prostaglandin E receptor 2 (subtype EP2), 53kDa |
| PTTG3P | pituitary tumor-transforming 3, pseudogene |
| PXMP4 | peroxisomal membrane protein 4, 24kDa |
| RAB27B | RAB27B, member RAS oncogene family |
| RASA2 | RAS p21 protein activator 2 |
| REPS2 | RALBP1 associated Eps domain containing 2 |
| RIBC2 | RIB43A domain with coiled-coils 2 |
| RIN1 | Ras and Rab interactor 1 |
| RNF122 | ring finger protein 122 |
| RPL10L | ribosomal protein L10-like |
| SETD8 | SET domain containing (lysine methyltransferase) 8 |
| SH3BGR | SH3 domain binding glutamate-rich protein |
| SLC2A8 | solute carrier family 2 (facilitated glucose transporter), member 8 |
| SND1-IT1 | SND1 intronic transcript 1 |
| SNORA21 | small nucleolar RNA, H/ACA box 21 |
| TBC1D19 | TBC1 domain family, member 19 |
| TDRD7 | tudor domain containing 7 |
| TGFBRAP1 | transforming growth factor, beta receptor associated protein 1 |
| TINF2 | TERF1 (TRF1)-interacting nuclear factor 2 |
| TMEM183A | transmembrane protein 183A |
| TPCN1 | two pore segment channel 1 |
| TRAIP | TRAF interacting protein |
| TRPC5 | transient receptor potential cation channel, subfamily C, member 5 |
| TRPV1 | transient receptor potential cation channel, subfamily V, member 1 |
| TTBK2 | tau tubulin kinase 2 |
| TTC23 | tetratricopeptide repeat domain 23 |
| TUBA3C | tubulin, alpha 3c |
| TUT1 | terminal uridylyl transferase 1, U6 snRNA-specific |
| UBQLN4 | ubiquilin 4 |
| USB1 | U6 snRNA biogenesis 1 |
| VEZT | vezatin, adherens junctions transmembrane protein |
| WNT10B | wingless-type MMTV integration site family, member 10B |
| ZFAND3 | zinc finger, AN1-type domain 3 |
| ZNF408 | zinc finger protein 408 |
| ZNF552 | zinc finger protein 552 |
