biliary Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

266 genes co-occuring with the biological term biliary in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCB11 ATP-binding cassette, sub-family B (MDR/TAP), member 11
ABCB4 ATP-binding cassette, sub-family B (MDR/TAP), member 4
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4
ABCG5 ATP-binding cassette, sub-family G (WHITE), member 5
ABCG8 ATP-binding cassette, sub-family G (WHITE), member 8
ACE angiotensin I converting enzyme
ADD3 adducin 3 (gamma)
ADIPOQ adiponectin, C1Q and collagen domain containing
AGR2 anterior gradient 2
ALB albumin
ALPP alkaline phosphatase, placental
ANXA2 annexin A2
APOA1 apolipoprotein A-I
APOB apolipoprotein B
AQP1 aquaporin 1 (Colton blood group)
AQP5 aquaporin 5
AR androgen receptor
ARRB1 arrestin, beta 1
ASPH aspartate beta-hydroxylase
ATM ATM serine/threonine kinase
ATP5A1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
ATP7B ATPase, Cu++ transporting, beta polypeptide
AZU1 azurocidin 1
BAX BCL2-associated X protein
BCL2L11 BCL2-like 11 (apoptosis facilitator)
BMI1 BMI1 proto-oncogene, polycomb ring finger
BRAF B-Raf proto-oncogene, serine/threonine kinase
CADM1 cell adhesion molecule 1
CAMP cathelicidin antimicrobial peptide
CAV1 caveolin 1, caveolae protein, 22kDa
CAV2 caveolin 2
CCK cholecystokinin
CCL2 chemokine (C-C motif) ligand 2
CCR2 chemokine (C-C motif) receptor 2
CCR5 chemokine (C-C motif) receptor 5 (gene/pseudogene)
CD14 CD14 molecule
CD1D CD1d molecule
CD24 CD24 molecule
CD27 CD27 molecule
CD38 CD38 molecule
CD4 CD4 molecule
CD40LG CD40 ligand
CD44 CD44 molecule (Indian blood group)
CDC42 cell division cycle 42
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CDH3 cadherin 3, type 1, P-cadherin (placental)
CDK10 cyclin-dependent kinase 10
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
CDKN2A cyclin-dependent kinase inhibitor 2A
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)
CFC1 cripto, FRL-1, cryptic family 1
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
CHUK conserved helix-loop-helix ubiquitous kinase
CLDN18 claudin 18
CLDN4 claudin 4
CLEC16A C-type lectin domain family 16, member A
CLU clusterin
CNR1 cannabinoid receptor 1 (brain)
CNR2 cannabinoid receptor 2 (macrophage)
COMMD1 copper metabolism (Murr1) domain containing 1
CRP C-reactive protein, pentraxin-related
CTGF connective tissue growth factor
CTLA4 cytotoxic T-lymphocyte-associated protein 4
CX3CL1 chemokine (C-X3-C motif) ligand 1
CX3CR1 chemokine (C-X3-C motif) receptor 1
CXCL10 chemokine (C-X-C motif) ligand 10
CXCL16 chemokine (C-X-C motif) ligand 16
CXCL8 chemokine (C-X-C motif) ligand 8
CXCL9 chemokine (C-X-C motif) ligand 9
CXCR3 chemokine (C-X-C motif) receptor 3
CYP2C19 cytochrome P450, family 2, subfamily C, polypeptide 19
CYP7A1 cytochrome P450, family 7, subfamily A, polypeptide 1
DBT dihydrolipoamide branched chain transacylase E2
DEFB1 defensin, beta 1
DEFB4A defensin, beta 4A
DLAT dihydrolipoamide S-acetyltransferase
DMBT1 deleted in malignant brain tumors 1
DNMT3B DNA (cytosine-5-)-methyltransferase 3 beta
DPYD dihydropyrimidine dehydrogenase
EBAG9 estrogen receptor binding site associated, antigen, 9
EGFR epidermal growth factor receptor
ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1
ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2
ERBB2 erb-b2 receptor tyrosine kinase 2
ERCC1 excision repair cross-complementation group 1
ESR1 estrogen receptor 1
ESR2 estrogen receptor 2 (ER beta)
ESRRG estrogen-related receptor gamma
FAS Fas cell surface death receptor
FASLG Fas ligand (TNF superfamily, member 6)
FCGR3A Fc fragment of IgG, low affinity IIIa, receptor (CD16a)
FCRL3 Fc receptor-like 3
FGD4 FYVE, RhoGEF and PH domain containing 4
FN1 fibronectin 1
FOXO1 forkhead box O1
FOXP3 forkhead box P3
FUT2 fucosyltransferase 2 (secretor status included)
GAST gastrin
GDF2 growth differentiation factor 2
GGT1 gamma-glutamyltransferase 1
GHRL ghrelin/obestatin prepropeptide
GNLY granulysin
GOT1 glutamic-oxaloacetic transaminase 1, soluble
GPBAR1 G protein-coupled bile acid receptor 1
GPT2 glutamic pyruvate transaminase (alanine aminotransferase) 2
GSTP1 glutathione S-transferase pi 1
HAMP hepcidin antimicrobial peptide
HES1 hes family bHLH transcription factor 1
HGF hepatocyte growth factor (hepapoietin A; scatter factor)
HLA-DPB1 major histocompatibility complex, class II, DP beta 1
HLA-DQB1 major histocompatibility complex, class II, DQ beta 1
HLA-DRB1 major histocompatibility complex, class II, DR beta 1
HLA-DRB4 major histocompatibility complex, class II, DR beta 4
HNF1A HNF1 homeobox A
HNF4A hepatocyte nuclear factor 4, alpha
HOXB7 homeobox B7
ICAM1 intercellular adhesion molecule 1
ICOS inducible T-cell co-stimulator
IDO1 indoleamine 2,3-dioxygenase 1
IFNG interferon, gamma
IGF1R insulin-like growth factor 1 receptor
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3
IHH indian hedgehog
IL12A interleukin 12A
IL12RB2 interleukin 12 receptor, beta 2
IL17A interleukin 17A
IL18 interleukin 18
IL1B interleukin 1, beta
IL23A interleukin 23, alpha subunit p19
IL2RA interleukin 2 receptor, alpha
IL32 interleukin 32
IL33 interleukin 33
IL4 interleukin 4
IL6 interleukin 6
IL7R interleukin 7 receptor
ITGAL integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)
ITGAV integrin, alpha V
ITGB2 integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
JAG1 jagged 1
KCNN4 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 4
KDR kinase insert domain receptor
KRAS Kirsten rat sarcoma viral oncogene homolog
KRT18 keratin 18, type I
KRT19 keratin 19, type I
KRT7 keratin 7, type II
KRT8 keratin 8, type II
LAMB3 laminin, beta 3
LAMC2 laminin, gamma 2
LAMP2 lysosomal-associated membrane protein 2
LEP leptin
LGR4 leucine-rich repeat containing G protein-coupled receptor 4
LSM14A LSM14A, SCD6 homolog A (S. cerevisiae)
LTA lymphotoxin alpha
MAPK1 mitogen-activated protein kinase 1
MAPK14 mitogen-activated protein kinase 14
MARCKS myristoylated alanine-rich protein kinase C substrate
MGMT O-6-methylguanine-DNA methyltransferase
MICA MHC class I polypeptide-related sequence A
MIF macrophage migration inhibitory factor (glycosylation-inhibiting factor)
MIR21 microRNA 21
MIR506 microRNA 506
MME membrane metallo-endopeptidase
MMP14 matrix metallopeptidase 14 (membrane-inserted)
MMP2 matrix metallopeptidase 2
MMP7 matrix metallopeptidase 7
MMP9 matrix metallopeptidase 9
MSH2 mutS homolog 2
MSLN mesothelin
MUC2 mucin 2, oligomeric mucus/gel-forming
MUC4 mucin 4, cell surface associated
MUC5AC mucin 5AC, oligomeric mucus/gel-forming
MX1 MX dynamin-like GTPase 1
MYD88 myeloid differentiation primary response 88
MYOD1 myogenic differentiation 1
MYOG myogenin (myogenic factor 4)
NCAM1 neural cell adhesion molecule 1
NEK2 NIMA-related kinase 2
NOD1 nucleotide-binding oligomerization domain containing 1
NOS2 nitric oxide synthase 2, inducible
NOS3 nitric oxide synthase 3 (endothelial cell)
NOTCH1 notch 1
NPC1 Niemann-Pick disease, type C1
NPC1L1 NPC1-like 1
NQO1 NAD(P)H dehydrogenase, quinone 1
NR1H4 nuclear receptor subfamily 1, group H, member 4
NUP210 nucleoporin 210kDa
OCLN occludin
P2RY2 purinergic receptor P2Y, G-protein coupled, 2
PDGFB platelet-derived growth factor beta polypeptide
PDHX pyruvate dehydrogenase complex, component X
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
PKHD1 polycystic kidney and hepatic disease 1 (autosomal recessive)
PKM pyruvate kinase, muscle
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid)
PPARG peroxisome proliferator-activated receptor gamma
PPARGC1A peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
PRF1 perforin 1 (pore forming protein)
PROM1 prominin 1
PRTN3 proteinase 3
PTGER4 prostaglandin E receptor 4 (subtype EP4)
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTPN22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
RAB7A RAB7A, member RAS oncogene family
RARRES3 retinoic acid receptor responder (tazarotene induced) 3
RBFOX1 RNA binding protein, fox-1 homolog (C. elegans) 1
RRAS related RAS viral (r-ras) oncogene homolog
RRM1 ribonucleotide reductase M1
RUNX3 runt-related transcription factor 3
S100A4 S100 calcium binding protein A4
S100A9 S100 calcium binding protein A9
SELE selectin E
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1
SERPINB5 serpin peptidase inhibitor, clade B (ovalbumin), member 5
SHBG sex hormone-binding globulin
SHH sonic hedgehog
SIAE sialic acid acetylesterase
SIGLEC1 sialic acid binding Ig-like lectin 1, sialoadhesin
SLC10A1 solute carrier family 10 (sodium/bile acid cotransporter), member 1
SLC17A9 solute carrier family 17 (vesicular nucleotide transporter), member 9
SLC22A1 solute carrier family 22 (organic cation transporter), member 1
SLC23A1 solute carrier family 23 (ascorbic acid transporter), member 1
SLC23A2 solute carrier family 23 (ascorbic acid transporter), member 2
SLC2A2 solute carrier family 2 (facilitated glucose transporter), member 2
SLC4A2 solute carrier family 4 (anion exchanger), member 2
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5
SLC9A3R1 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1
SMAD4 SMAD family member 4
SOCS1 suppressor of cytokine signaling 1
SOX17 SRY (sex determining region Y)-box 17
SPARC secreted protein, acidic, cysteine-rich (osteonectin)
SPIB Spi-B transcription factor (Spi-1/PU.1 related)
SPP1 secreted phosphoprotein 1
SQSTM1 sequestosome 1
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
STAT4 signal transducer and activator of transcription 4
TERT telomerase reverse transcriptase
TFF2 trefoil factor 2
TFF3 trefoil factor 3 (intestinal)
TGFB1 transforming growth factor, beta 1
TGFBR2 transforming growth factor, beta receptor II (70/80kDa)
TIMP1 TIMP metallopeptidase inhibitor 1
TIMP3 TIMP metallopeptidase inhibitor 3
TJP1 tight junction protein 1
TLR2 toll-like receptor 2
TLR3 toll-like receptor 3
TLR4 toll-like receptor 4
TNF tumor necrosis factor
TNFRSF10A tumor necrosis factor receptor superfamily, member 10a
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10
TNFSF13 tumor necrosis factor (ligand) superfamily, member 13
TNFSF13B tumor necrosis factor (ligand) superfamily, member 13b
TNFSF15 tumor necrosis factor (ligand) superfamily, member 15
TNFSF4 tumor necrosis factor (ligand) superfamily, member 4
TNFSF9 tumor necrosis factor (ligand) superfamily, member 9
TP53 tumor protein p53
TRAF1 TNF receptor-associated factor 1
TYK2 tyrosine kinase 2
TYMS thymidylate synthetase
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor
VEGFA vascular endothelial growth factor A
VTCN1 V-set domain containing T cell activation inhibitor 1
WNT1 wingless-type MMTV integration site family, member 1
YAP1 Yes-associated protein 1