bmd Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
Description The amount of mineral per square centimeter of BONE. This is the definition used in clinical practice. Actual bone density would be expressed in grams per milliliter. It is most frequently measured by X-RAY ABSORPTIOMETRY or TOMOGRAPHY, X RAY COMPUTED. Bone density is an important predictor for OSTEOPOROSIS. (Experimental Factor Ontology, EFO_0003923)
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Genes

108 genes co-occuring with the biological term bmd in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ADAMTS18 ADAM metallopeptidase with thrombospondin type 1 motif, 18
ADCY10 adenylate cyclase 10 (soluble)
ADIPOQ adiponectin, C1Q and collagen domain containing
ADIPOR1 adiponectin receptor 1
AHSG alpha-2-HS-glycoprotein
ALOX12 arachidonate 12-lipoxygenase
ALOX15 arachidonate 15-lipoxygenase
ALPL alkaline phosphatase, liver/bone/kidney
ANKH ANKH inorganic pyrophosphate transport regulator
APOE apolipoprotein E
AQP9 aquaporin 9
AR androgen receptor
BGLAP bone gamma-carboxyglutamate (gla) protein
BICC1 BicC family RNA binding protein 1
CASR calcium-sensing receptor
CD40 CD40 molecule, TNF receptor superfamily member 5
CER1 cerberus 1, DAN family BMP antagonist
CGA glycoprotein hormones, alpha polypeptide
CIITA class II, major histocompatibility complex, transactivator
CLCN7 chloride channel, voltage-sensitive 7
CLEC16A C-type lectin domain family 16, member A
COL1A1 collagen, type I, alpha 1
COMT catechol-O-methyltransferase
CTSK cathepsin K
CYP17A1 cytochrome P450, family 17, subfamily A, polypeptide 1
CYP19A1 cytochrome P450, family 19, subfamily A, polypeptide 1
CYP2C19 cytochrome P450, family 2, subfamily C, polypeptide 19
CYP2C9 cytochrome P450, family 2, subfamily C, polypeptide 9
CYP2D6 cytochrome P450, family 2, subfamily D, polypeptide 6
DIO2 deiodinase, iodothyronine, type II
DKK1 dickkopf WNT signaling pathway inhibitor 1
DMD dystrophin
ESR1 estrogen receptor 1
ESR2 estrogen receptor 2 (ER beta)
ESRRA estrogen-related receptor alpha
FABP3 fatty acid binding protein 3, muscle and heart
FAM3C family with sequence similarity 3, member C
FGFR1 fibroblast growth factor receptor 1
FLNB filamin B, beta
FLT3 fms-related tyrosine kinase 3
FOXC2 forkhead box C2
FTO fat mass and obesity associated
GC group-specific component (vitamin D binding protein)
GGPS1 geranylgeranyl diphosphate synthase 1
GHRL ghrelin/obestatin prepropeptide
GPRC6A G protein-coupled receptor, class C, group 6, member A
HOXD4 homeobox D4
ICAM1 intercellular adhesion molecule 1
IFNG interferon, gamma
IGF1 insulin-like growth factor 1 (somatomedin C)
IGF1R insulin-like growth factor 1 receptor
IGFBP2 insulin-like growth factor binding protein 2, 36kDa
IL1A interleukin 1, alpha
IL1RN interleukin 1 receptor antagonist
IL6 interleukin 6
ITGA1 integrin, alpha 1
ITLN1 intelectin 1 (galactofuranose binding)
LEP leptin
LEPQTL1 Leptin, serum levels of
LEPR leptin receptor
LGR4 leucine-rich repeat containing G protein-coupled receptor 4
LRP4 low density lipoprotein receptor-related protein 4
LRP5 low density lipoprotein receptor-related protein 5
LRP6 low density lipoprotein receptor-related protein 6
MEF2C myocyte enhancer factor 2C
MSTN myostatin
MTHFR methylenetetrahydrofolate reductase (NAD(P)H)
MTTP microsomal triglyceride transfer protein
NOG noggin
NOS3 nitric oxide synthase 3 (endothelial cell)
NR1I3 nuclear receptor subfamily 1, group I, member 3
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
PARP1 poly (ADP-ribose) polymerase 1
PLIN1 perilipin 1
PON1 paraoxonase 1
PPARG peroxisome proliferator-activated receptor gamma
PPARGC1A peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
PRDM2 PR domain containing 2, with ZNF domain
PTH parathyroid hormone
PTPN22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
PYY peptide YY
QPCT glutaminyl-peptide cyclotransferase
ROR2 receptor tyrosine kinase-like orphan receptor 2
RUNX2 runt-related transcription factor 2
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
SFRP1 secreted frizzled-related protein 1
SHBG sex hormone-binding globulin
SMAD2 SMAD family member 2
SOST sclerostin
SP110 SP110 nuclear body protein
SPP1 secreted phosphoprotein 1
TGFB1 transforming growth factor, beta 1
TGFBR3 transforming growth factor, beta receptor III
THRA thyroid hormone receptor, alpha
TIMP2 TIMP metallopeptidase inhibitor 2
TNF tumor necrosis factor
TNFRSF11A tumor necrosis factor receptor superfamily, member 11a, NFKB activator
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b
TNFSF11 tumor necrosis factor (ligand) superfamily, member 11
TRPS1 trichorhinophalangeal syndrome I
TSHB thyroid stimulating hormone, beta
TSHR thyroid stimulating hormone receptor
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor
VEGFA vascular endothelial growth factor A
VKORC1 vitamin K epoxide reductase complex, subunit 1
VLDLR very low density lipoprotein receptor
WNT10B wingless-type MMTV integration site family, member 10B
WNT16 wingless-type MMTV integration site family, member 16