broad Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

244 genes co-occuring with the biological term broad in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
A2M alpha-2-macroglobulin
AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase
ABCA3 ATP-binding cassette, sub-family A (ABC1), member 3
ABCE1 ATP-binding cassette, sub-family E (OABP), member 1
ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group)
ACER2 alkaline ceramidase 2
ACTB actin, beta
ADAM17 ADAM metallopeptidase domain 17
ADAMTS18 ADAM metallopeptidase with thrombospondin type 1 motif, 18
ADM adrenomedullin
AFP alpha-fetoprotein
ALK anaplastic lymphoma receptor tyrosine kinase
ALKBH5 AlkB family member 5, RNA demethylase
APC adenomatous polyposis coli
APOBEC3B apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B
APOE apolipoprotein E
APP amyloid beta (A4) precursor protein
AR androgen receptor
ARF6 ADP-ribosylation factor 6
ASCL1 achaete-scute family bHLH transcription factor 1
ATXN3 ataxin 3
BAX BCL2-associated X protein
BCL6 B-cell CLL/lymphoma 6
BCO2 beta-carotene oxygenase 2
BEST1 bestrophin 1
BIRC7 baculoviral IAP repeat containing 7
BMP2 bone morphogenetic protein 2
BMP6 bone morphogenetic protein 6
BSCL2 Berardinelli-Seip congenital lipodystrophy 2 (seipin)
BST2 bone marrow stromal cell antigen 2
C12ORF65 chromosome 12 open reading frame 65
CACNA1A calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
CACYBP calcyclin binding protein
CAMK2D calcium/calmodulin-dependent protein kinase II delta
CASP8AP2 caspase 8 associated protein 2
CCL20 chemokine (C-C motif) ligand 20
CCR2 chemokine (C-C motif) receptor 2
CCR5 chemokine (C-C motif) receptor 5 (gene/pseudogene)
CCR6 chemokine (C-C motif) receptor 6
CD1B CD1b molecule
CD209 CD209 molecule
CD44 CD44 molecule (Indian blood group)
CD93 CD93 molecule
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CELF1 CUGBP, Elav-like family member 1
CERS2 ceramide synthase 2
CES1 carboxylesterase 1
CES2 carboxylesterase 2
CFH complement factor H
CHRNA5 cholinergic receptor, nicotinic, alpha 5 (neuronal)
CHRNA7 cholinergic receptor, nicotinic, alpha 7 (neuronal)
CLN5 ceroid-lipofuscinosis, neuronal 5
CLOCK clock circadian regulator
COL7A1 collagen, type VII, alpha 1
COQ4 coenzyme Q4
CTAG1B cancer/testis antigen 1B
CTBP1 C-terminal binding protein 1
CX3CL1 chemokine (C-X3-C motif) ligand 1
CXCL1 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)
CXCL8 chemokine (C-X-C motif) ligand 8
CXCR2 chemokine (C-X-C motif) receptor 2
CYP19A1 cytochrome P450, family 19, subfamily A, polypeptide 1
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1
CYP21A2 cytochrome P450, family 21, subfamily A, polypeptide 2
CYP2C9 cytochrome P450, family 2, subfamily C, polypeptide 9
CYP2D6 cytochrome P450, family 2, subfamily D, polypeptide 6
CYP46A1 cytochrome P450, family 46, subfamily A, polypeptide 1
DCT dopachrome tautomerase
DDX58 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
DICER1 dicer 1, ribonuclease type III
DKK3 dickkopf WNT signaling pathway inhibitor 3
DLX1 distal-less homeobox 1
DMBT1 deleted in malignant brain tumors 1
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1
EGFR epidermal growth factor receptor
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2
ERBB2 erb-b2 receptor tyrosine kinase 2
ERBB3 erb-b2 receptor tyrosine kinase 3
ERCC2 excision repair cross-complementation group 2
ESR1 estrogen receptor 1
FMR1 fragile X mental retardation 1
FN1 fibronectin 1
FOXE3 forkhead box E3
FST follistatin
FTO fat mass and obesity associated
FURIN furin (paired basic amino acid cleaving enzyme)
GABRB3 gamma-aminobutyric acid (GABA) A receptor, beta 3
GCG glucagon
GDF15 growth differentiation factor 15
GH1 growth hormone 1
GM2A GM2 ganglioside activator
HAVCR1 hepatitis A virus cellular receptor 1
HDAC4 histone deacetylase 4
HFE2 hemochromatosis type 2 (juvenile)
HGF hepatocyte growth factor (hepapoietin A; scatter factor)
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HLA-A major histocompatibility complex, class I, A
HLTF helicase-like transcription factor
HNF1B HNF1 homeobox B
HNF4A hepatocyte nuclear factor 4, alpha
HPRT1 hypoxanthine phosphoribosyltransferase 1
HRG histidine-rich glycoprotein
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1
IAPP islet amyloid polypeptide
IFITM1 interferon induced transmembrane protein 1
IFITM2 interferon induced transmembrane protein 2
IFITM3 interferon induced transmembrane protein 3
IGF1 insulin-like growth factor 1 (somatomedin C)
IKBKB inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta
IL15RA interleukin 15 receptor, alpha
IL31 interleukin 31
IRF5 interferon regulatory factor 5
IRF6 interferon regulatory factor 6
IRF7 interferon regulatory factor 7
ISL2 ISL LIM homeobox 2
ITGA6 integrin, alpha 6
ITGAM integrin, alpha M (complement component 3 receptor 3 subunit)
ITGB2 integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
ITGB4 integrin, beta 4
KDM5A lysine (K)-specific demethylase 5A
KLRK1 killer cell lectin-like receptor subfamily K, member 1
LAMB2 laminin, beta 2 (laminin S)
LMAN1 lectin, mannose-binding, 1
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4
MAPT microtubule-associated protein tau
MBNL1 muscleblind-like splicing regulator 1
MCL1 myeloid cell leukemia 1
MECP2 methyl CpG binding protein 2
MED12 mediator complex subunit 12
MEN1 multiple endocrine neoplasia I
MET MET proto-oncogene, receptor tyrosine kinase
MICA MHC class I polypeptide-related sequence A
MICB MHC class I polypeptide-related sequence B
MIR27A microRNA 27a
MIR34A microRNA 34a
MIR451A microRNA 451a
MLC1 megalencephalic leukoencephalopathy with subcortical cysts 1
MMP12 matrix metallopeptidase 12
MMP13 matrix metallopeptidase 13
MMP20 matrix metallopeptidase 20
MMP7 matrix metallopeptidase 7
MMP9 matrix metallopeptidase 9
MTDH metadherin
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MYBPC3 myosin binding protein C, cardiac
MYC v-myc avian myelocytomatosis viral oncogene homolog
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog
MYH7 myosin, heavy chain 7, cardiac muscle, beta
NCOA3 nuclear receptor coactivator 3
NEWENTRY Record to support submission of GeneRIFs for a gene not in Gene (human; man).
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NKX2-5 NK2 homeobox 5
NOD2 nucleotide-binding oligomerization domain containing 2
NOG noggin
NOS1 nitric oxide synthase 1 (neuronal)
NPHP3 nephronophthisis 3 (adolescent)
NR1I2 nuclear receptor subfamily 1, group I, member 2
NR1I3 nuclear receptor subfamily 1, group I, member 3
NR5A1 nuclear receptor subfamily 5, group A, member 1
NTRK3 neurotrophic tyrosine kinase, receptor, type 3
NUDT5 nudix (nucleoside diphosphate linked moiety X)-type motif 5
NUPR1 nuclear protein, transcriptional regulator, 1
OLFM4 olfactomedin 4
OPCML opioid binding protein/cell adhesion molecule-like
OPRD1 opioid receptor, delta 1
P2RX3 purinergic receptor P2X, ligand gated ion channel, 3
PCSK5 proprotein convertase subtilisin/kexin type 5
PCSK9 proprotein convertase subtilisin/kexin type 9
PDHA1 pyruvate dehydrogenase (lipoamide) alpha 1
PEX7 peroxisomal biogenesis factor 7
PIGV phosphatidylinositol glycan anchor biosynthesis, class V
PITX1 paired-like homeodomain 1
PKMYT1 protein kinase, membrane associated tyrosine/threonine 1
POLE polymerase (DNA directed), epsilon, catalytic subunit
POLG polymerase (DNA directed), gamma
PPARA peroxisome proliferator-activated receptor alpha
PPARG peroxisome proliferator-activated receptor gamma
PRKRA protein kinase, interferon-inducible double stranded RNA dependent activator
PRPH2 peripherin 2 (retinal degeneration, slow)
PSEN1 presenilin 1
PTPRC protein tyrosine phosphatase, receptor type, C
PWP1 PWP1 homolog (S. cerevisiae)
PYCARD PYD and CARD domain containing
QPCT glutaminyl-peptide cyclotransferase
RABIF RAB interacting factor
RARRES2 retinoic acid receptor responder (tazarotene induced) 2
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A
RET ret proto-oncogene
RFX6 regulatory factor X, 6
RGS1 regulator of G-protein signaling 1
RLN3 relaxin 3
RNASE8 ribonuclease, RNase A family, 8
RPS19 ribosomal protein S19
SAMHD1 SAM domain and HD domain 1
SBK1 SH3 domain binding kinase 1
SCN2A sodium channel, voltage gated, type II alpha subunit
SELPLG selectin P ligand
SGK1 serum/glucocorticoid regulated kinase 1
SHOX short stature homeobox
SKIL SKI-like proto-oncogene
SLC29A3 solute carrier family 29 (equilibrative nucleoside transporter), member 3
SLC2A9 solute carrier family 2 (facilitated glucose transporter), member 9
SLC6A14 solute carrier family 6 (amino acid transporter), member 14
SLC6A3 solute carrier family 6 (neurotransmitter transporter), member 3
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4
SLFN11 schlafen family member 11
SLU7 SLU7 splicing factor homolog (S. cerevisiae)
SMPD1 sphingomyelin phosphodiesterase 1, acid lysosomal
SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1
SORL1 sortilin-related receptor, L(DLR class) A repeats containing
SPAST spastin
SPG38 spastic paraplegia 38 (autosomal dominant, Silver syndrome)
SPN sialophorin
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
STRA6 stimulated by retinoic acid 6
TAC1 tachykinin, precursor 1
TAC3 tachykinin 3
TACR3 tachykinin receptor 3
TAS2R43 taste receptor, type 2, member 43
TDG thymine-DNA glycosylase
TDP1 tyrosyl-DNA phosphodiesterase 1
TF transferrin
TFF3 trefoil factor 3 (intestinal)
TGFB1 transforming growth factor, beta 1
THAP1 THAP domain containing, apoptosis associated protein 1
TIRAP toll-interleukin 1 receptor (TIR) domain containing adaptor protein
TLR5 toll-like receptor 5
TLR7 toll-like receptor 7
TLR9 toll-like receptor 9
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10
TOP2A topoisomerase (DNA) II alpha 170kDa
TP63 tumor protein p63
TRIM28 tripartite motif containing 28
TSC2 tuberous sclerosis 2
TUBB4B tubulin, beta 4B class IVb
UBE3A ubiquitin protein ligase E3A
UCHL1 ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
UPP2 uridine phosphorylase 2
USP18 ubiquitin specific peptidase 18
VEGFA vascular endothelial growth factor A
WDR19 WD repeat domain 19
WDR62 WD repeat domain 62
WT1 Wilms tumor 1
XCR1 chemokine (C motif) receptor 1