c-Kit-IN-1_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description c-Kit-IN-1 perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the c-Kit-IN-1_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TRIO trio Rho guanine nucleotide exchange factor 0.230382
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.18649
DST dystonin 0.129595
SLC39A11 solute carrier family 39, member 11 0.120582
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.114217
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.104462
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0959399
FRMD5 FERM domain containing 5 0.0901697
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0896061
TENM3 teneurin transmembrane protein 3 0.0877264
HDAC9 histone deacetylase 9 0.0813489
AUTS2 autism susceptibility candidate 2 0.0754022
RUNX1 runt-related transcription factor 1 0.0691861
MYH9 myosin, heavy chain 9, non-muscle 0.0670112
BHLHE40 basic helix-loop-helix family, member e40 0.0665359
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0643084
MSI2 musashi RNA-binding protein 2 0.0622593
NDRG1 N-myc downstream regulated 1 0.0612039
DLG1 discs, large homolog 1 (Drosophila) 0.060234
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0592108
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0587127
RHOBTB3 Rho-related BTB domain containing 3 0.0583428
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.057301
CD109 CD109 molecule 0.0572541
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0565083
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0563424
NAV2 neuron navigator 2 0.0554879
AFF4 AF4/FMR2 family, member 4 0.0551265
FNDC3B fibronectin type III domain containing 3B 0.0540425
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0523113
TSC22D2 TSC22 domain family, member 2 0.0500752
EEF2 eukaryotic translation elongation factor 2 0.0499226
ANK2 ankyrin 2, neuronal 0.0497587
CANX calnexin 0.047179
OR51B5 olfactory receptor, family 51, subfamily B, member 5 0.0466349
FBXL7 F-box and leucine-rich repeat protein 7 0.0463786
MBNL2 muscleblind-like splicing regulator 2 0.0455233
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0454644
FLNB filamin B, beta 0.0450706
APP amyloid beta (A4) precursor protein 0.0450083
COPA coatomer protein complex, subunit alpha 0.0441706
UBE2H ubiquitin-conjugating enzyme E2H 0.0438933
HS3ST3A1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 0.043877
LDHA lactate dehydrogenase A 0.0436083
ADAM9 ADAM metallopeptidase domain 9 0.0434603
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0413215
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0411075
HELZ helicase with zinc finger 0.0410502
FLNA filamin A, alpha 0.040708
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0402461
COL5A1 collagen, type V, alpha 1 0.039722
SH3BP5 SH3-domain binding protein 5 (BTK-associated) 0.0389354
MACF1 microtubule-actin crosslinking factor 1 0.0388159
ARFGEF3 ARFGEF family member 3 0.0378668
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0377354
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0371658
PRELID2 PRELI domain containing 2 0.0370887
TPM3 tropomyosin 3 0.0370632
ZFAND3 zinc finger, AN1-type domain 3 0.0368219
ARL15 ADP-ribosylation factor-like 15 0.0366861
EGFR epidermal growth factor receptor 0.0365933
MSN moesin 0.0362523
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0359417
FSTL1 follistatin-like 1 0.0358928
FNIP1 folliculin interacting protein 1 0.0357644
FAM219A family with sequence similarity 219, member A 0.0356777
PBX3 pre-B-cell leukemia homeobox 3 0.0356771
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0354735
MAP1B microtubule-associated protein 1B 0.0351765
USP34 ubiquitin specific peptidase 34 0.0351563
GOLGA4 golgin A4 0.0351394
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0348197
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0347588
TUFT1 tuftelin 1 0.0344092
RND3 Rho family GTPase 3 0.0342801
ZNF207 zinc finger protein 207 0.0342393
MYOF myoferlin 0.0341124
ATP13A3 ATPase type 13A3 0.0339173
CAMK2D calcium/calmodulin-dependent protein kinase II delta 0.0335974
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0335838
TAOK1 TAO kinase 1 0.0334075
ANO6 anoctamin 6 0.0327454
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0327353
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit 0.0325345
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 0.0324738
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0317578
GARS1 glycyl-tRNA synthetase 1 0.0314709
RTN4 reticulon 4 0.0313594
LIMCH1 LIM and calponin homology domains 1 0.0312515
NBAS neuroblastoma amplified sequence 0.0312293
GPC6 glypican 6 0.0309878
KMT2E lysine (K)-specific methyltransferase 2E 0.0307256
SRRM2 serine/arginine repetitive matrix 2 0.03058
FMNL2 formin-like 2 0.0305269
SFTPA2 surfactant protein A2 0.0304943
DENND1A DENN/MADD domain containing 1A 0.030373
PLEC plectin 0.0302643
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0300006
DPYSL3 dihydropyrimidinase-like 3 0.0297666
NUP58 nucleoporin 58 0.0294303

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.14783
VIM vimentin -0.145877
MT2A metallothionein 2A -0.126391
AKAP12 A kinase (PRKA) anchor protein 12 -0.114918
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0957885
LOX lysyl oxidase -0.079019
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0783023
COL1A2 collagen, type I, alpha 2 -0.0647311
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0629455
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0609973
HLA-B major histocompatibility complex, class I, B -0.0608363
COL3A1 collagen, type III, alpha 1 -0.0597661
S100A10 S100 calcium binding protein A10 -0.0580894
IGFBP3 insulin-like growth factor binding protein 3 -0.0568954
SUCNR1 succinate receptor 1 -0.0504227
FBN1 fibrillin 1 -0.0471997
PRSS23 protease, serine, 23 -0.0468353
MX2 MX dynamin-like GTPase 2 -0.0467649
SAMD9 sterile alpha motif domain containing 9 -0.0452209
TPT1 tumor protein, translationally-controlled 1 -0.0450634
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0447654
ISG15 ISG15 ubiquitin-like modifier -0.0424683
B2M beta-2-microglobulin -0.041023
S100A6 S100 calcium binding protein A6 -0.0404129
THBS2 thrombospondin 2 -0.0395986
HLA-C major histocompatibility complex, class I, C -0.0372543
IFITM1 interferon induced transmembrane protein 1 -0.0356151
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0353649
IFITM3 interferon induced transmembrane protein 3 -0.0352173
PTMA prothymosin, alpha -0.0347985
PSD3 pleckstrin and Sec7 domain containing 3 -0.0337063
CD44 CD44 molecule (Indian blood group) -0.0333017
IFIH1 interferon induced with helicase C domain 1 -0.0323365
SLC38A1 solute carrier family 38, member 1 -0.0322251
CAVIN1 caveolae associated protein 1 -0.0319304
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0287902
ERRFI1 ERBB receptor feedback inhibitor 1 -0.028728
IFI6 interferon, alpha-inducible protein 6 -0.0284843
RPL12 ribosomal protein L12 -0.0278815
PLAUR plasminogen activator, urokinase receptor -0.0277042
TUBB4B tubulin, beta 4B class IVb -0.0276577
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0272561
FTH1 ferritin, heavy polypeptide 1 -0.0271798
RIGI RNA sensor RIG-I -0.0271319
COL5A2 collagen, type V, alpha 2 -0.0270249
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0263917
RPS23 ribosomal protein S23 -0.026185
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0260493
DIRAS3 DIRAS family, GTP-binding RAS-like 3 -0.0251089
S100A4 S100 calcium binding protein A4 -0.0250296
ABI3BP ABI family, member 3 (NESH) binding protein -0.0245658
WWTR1 WW domain containing transcription regulator 1 -0.0244256
FTL ferritin, light polypeptide -0.0242266
FN1 fibronectin 1 -0.0240562
MYADM myeloid-associated differentiation marker -0.023908
RPL35A ribosomal protein L35a -0.0235162
RPLP1 ribosomal protein, large, P1 -0.0232731
TMSB4X thymosin beta 4, X-linked -0.0232219
DHRSX dehydrogenase/reductase (SDR family) X-linked -0.0231658
ARHGAP5 Rho GTPase activating protein 5 -0.0230736
RPS8 ribosomal protein S8 -0.0229832
RPL34 ribosomal protein L34 -0.0228671
NAV1 neuron navigator 1 -0.0227986
CD99 CD99 molecule -0.0219266
RPL37A ribosomal protein L37a -0.0218404
NPR2 natriuretic peptide receptor 2 -0.0215858
RPS6 ribosomal protein S6 -0.0215495
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0215392
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0212772
RPL28 ribosomal protein L28 -0.0212353
SP100 SP100 nuclear antigen -0.0211532
RRBP1 ribosome binding protein 1 -0.0208203
FRMD4A FERM domain containing 4A -0.0207095
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0205781
RPLP2 ribosomal protein, large, P2 -0.0205753
SEC61G Sec61 gamma subunit -0.020482
RPL26 ribosomal protein L26 -0.020331
RPS24 ribosomal protein S24 -0.0201731
CD63 CD63 molecule -0.0201359
RPL36 ribosomal protein L36 -0.0196739
EDF1 endothelial differentiation-related factor 1 -0.0195242
RPS13 ribosomal protein S13 -0.019519
STC1 stanniocalcin 1 -0.0191147
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0190223
HLA-E major histocompatibility complex, class I, E -0.018862
SAMD9L sterile alpha motif domain containing 9-like -0.0187898
RPL38 ribosomal protein L38 -0.0187111
RPS27A ribosomal protein S27a -0.0185941
CBX3 chromobox homolog 3 -0.0184233
RPL23 ribosomal protein L23 -0.0184136
SCLT1 sodium channel and clathrin linker 1 -0.0181738
S100A11 S100 calcium binding protein A11 -0.0181467
OASL 2'-5'-oligoadenylate synthetase-like -0.0181079
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0180628
PLAT plasminogen activator, tissue -0.0176057
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0173467
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0172656
ZNFX1 zinc finger, NFX1-type containing 1 -0.0170861
NT5C2 5'-nucleotidase, cytosolic II -0.0168618
ACTG1 actin gamma 1 -0.0167144