c-Kit-IN-1_A549 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description c-Kit-IN-1 perturbation in A549 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the c-Kit-IN-1_A549 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SLC35F3 solute carrier family 35, member F3 0.109506
ZSWIM6 zinc finger, SWIM-type containing 6 0.0982779
THSD4 thrombospondin, type I, domain containing 4 0.0928811
EFNA5 ephrin-A5 0.0922038
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0890574
PLEC plectin 0.0889383
EXT1 exostosin glycosyltransferase 1 0.0887745
ALCAM activated leukocyte cell adhesion molecule 0.0880558
EEF2 eukaryotic translation elongation factor 2 0.0808547
SOD2 superoxide dismutase 2, mitochondrial 0.0808127
PDE4D phosphodiesterase 4D, cAMP-specific 0.0785139
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0750337
EGFR epidermal growth factor receptor 0.0706732
AUTS2 autism susceptibility candidate 2 0.0691127
GRB10 growth factor receptor-bound protein 10 0.0678316
AHNAK AHNAK nucleoprotein 0.0622879
ACTN4 actinin, alpha 4 0.0620686
CMIP c-Maf inducing protein 0.0620271
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0613772
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0612089
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0607261
DOCK5 dedicator of cytokinesis 5 0.0604587
EHBP1 EH domain binding protein 1 0.0583626
IGF1R insulin-like growth factor 1 receptor 0.0580144
RNF213 ring finger protein 213 0.0574832
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0572621
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0570563
IGFBP3 insulin-like growth factor binding protein 3 0.0569677
FLNA filamin A, alpha 0.056
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.054719
PTK2 protein tyrosine kinase 2 0.0540483
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.0531088
PDLIM5 PDZ and LIM domain 5 0.0529052
FAT1 FAT atypical cadherin 1 0.0524899
SAMD4A sterile alpha motif domain containing 4A 0.0522521
FTH1 ferritin, heavy polypeptide 1 0.0516261
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0506219
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.050475
ASPH aspartate beta-hydroxylase 0.0486226
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0479413
FNIP1 folliculin interacting protein 1 0.0459556
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0451943
MYH9 myosin, heavy chain 9, non-muscle 0.0450705
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0448217
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0438279
VCL vinculin 0.0436849
LPP LIM domain containing preferred translocation partner in lipoma 0.0427651
DST dystonin 0.0422326
PRKCA protein kinase C, alpha 0.042087
HMGA2 high mobility group AT-hook 2 0.0408374
INTS6 integrator complex subunit 6 0.0407617
ANXA2 annexin A2 0.0402202
GLS2 glutaminase 2 (liver, mitochondrial) 0.0401381
WWOX WW domain containing oxidoreductase 0.0398599
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0391309
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0388697
MSI2 musashi RNA-binding protein 2 0.0376643
PAPPA pregnancy-associated plasma protein A, pappalysin 1 0.0374843
MYO10 myosin X 0.0370511
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0370504
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0370161
TNS3 tensin 3 0.0369637
NRG1 neuregulin 1 0.0369365
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0367862
SHB Src homology 2 domain containing adaptor protein B 0.0366546
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0361781
CXCL8 chemokine (C-X-C motif) ligand 8 0.0359545
TCF12 transcription factor 12 0.035915
LIMCH1 LIM and calponin homology domains 1 0.0358914
MACF1 microtubule-actin crosslinking factor 1 0.0356093
RAD51B RAD51 paralog B 0.0350508
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.0349105
SQSTM1 sequestosome 1 0.0348599
MYO1E myosin IE 0.0348257
FN1 fibronectin 1 0.0347139
MCTP1 multiple C2 domains, transmembrane 1 0.0345297
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.034504
KIRREL3 kin of IRRE like 3 (Drosophila) 0.0341311
NF1 neurofibromin 1 0.0338941
AKAP13 A kinase (PRKA) anchor protein 13 0.0335687
PALLD palladin, cytoskeletal associated protein 0.0333963
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0331625
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0329419
DENND1A DENN/MADD domain containing 1A 0.0328715
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0324502
GPC6 glypican 6 0.0321947
SP100 SP100 nuclear antigen 0.0321351
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0316294
PCSK5 proprotein convertase subtilisin/kexin type 5 0.0316236
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0312378
RHCG Rh family, C glycoprotein 0.0312004
ZBTB20 zinc finger and BTB domain containing 20 0.0311626
EZR ezrin 0.0307041
BICC1 BicC family RNA binding protein 1 0.0305471
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0301712
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 0.0300773
PTPRM protein tyrosine phosphatase, receptor type, M 0.0299574
MED13 mediator complex subunit 13 0.0297728
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0295398
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0292085

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.160156
MT2A metallothionein 2A -0.156414
AKAP12 A kinase (PRKA) anchor protein 12 -0.152307
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.122456
FTL ferritin, light polypeptide -0.0991622
TMSB10 thymosin beta 10 -0.0927005
MT1X metallothionein 1X -0.072429
STC1 stanniocalcin 1 -0.0712761
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 -0.0704343
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0603677
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0598683
KCTD9 potassium channel tetramerization domain containing 9 -0.0578876
RPLP1 ribosomal protein, large, P1 -0.0571563
RPS6 ribosomal protein S6 -0.0545134
ACTG1 actin gamma 1 -0.0538778
RPS19 ribosomal protein S19 -0.0522176
BASP1 brain abundant, membrane attached signal protein 1 -0.0487664
VEZT vezatin, adherens junctions transmembrane protein -0.0451895
TM4SF1 transmembrane 4 L six family member 1 -0.0450028
UBC ubiquitin C -0.0431895
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0414351
DGKD diacylglycerol kinase, delta 130kDa -0.0412097
NAMPT nicotinamide phosphoribosyltransferase -0.0409294
RPS2 ribosomal protein S2 -0.0394426
FGD6 FYVE, RhoGEF and PH domain containing 6 -0.0383316
USP3 ubiquitin specific peptidase 3 -0.0375534
VIM vimentin -0.0372299
IGFBP4 insulin-like growth factor binding protein 4 -0.0372248
C15ORF48 chromosome 15 open reading frame 48 -0.037003
S100A6 S100 calcium binding protein A6 -0.0367353
RB1CC1 RB1-inducible coiled-coil 1 -0.0367004
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0362462
ARHGAP26 Rho GTPase activating protein 26 -0.0356569
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0352913
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0349086
AGFG1 ArfGAP with FG repeats 1 -0.0340814
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0335672
TXNRD1 thioredoxin reductase 1 -0.0334448
EIF1 eukaryotic translation initiation factor 1 -0.0332506
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0327838
BTG1 B-cell translocation gene 1, anti-proliferative -0.0321187
PFN1 profilin 1 -0.0315741
RPL28 ribosomal protein L28 -0.0303977
PTMA prothymosin, alpha -0.0297676
AXL AXL receptor tyrosine kinase -0.0286652
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0286305
KRT81 keratin 81, type II -0.0275901
RIN2 Ras and Rab interactor 2 -0.0274893
NDRG1 N-myc downstream regulated 1 -0.0274602
RPS16 ribosomal protein S16 -0.0273321
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0272496
RPL26 ribosomal protein L26 -0.026742
RPL7 ribosomal protein L7 -0.0267093
CDCA2 cell division cycle associated 2 -0.026661
YBX3 Y box binding protein 3 -0.0265368
ANGPTL4 angiopoietin-like 4 -0.0261825
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0259441
RPS13 ribosomal protein S13 -0.0254712
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0247015
RPS27A ribosomal protein S27a -0.024204
RPL18 ribosomal protein L18 -0.0241642
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0239611
RPS23 ribosomal protein S23 -0.023259
RPS8 ribosomal protein S8 -0.0232193
HELZ helicase with zinc finger -0.0230623
KTN1 kinectin 1 (kinesin receptor) -0.0227597
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0221786
GPRIN3 GPRIN family member 3 -0.0220375
OGA O-GlcNAcase -0.0220368
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0218312
RPL12 ribosomal protein L12 -0.0218163
RPL32 ribosomal protein L32 -0.0214685
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0213575
UGCG UDP-glucose ceramide glucosyltransferase -0.0212127
AKR1C2 aldo-keto reductase family 1, member C2 -0.0211865
KDM3A lysine (K)-specific demethylase 3A -0.0210891
RPS3 ribosomal protein S3 -0.0209761
RPS5 ribosomal protein S5 -0.0208787
ADAM17 ADAM metallopeptidase domain 17 -0.0208695
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0204011
WASF2 WAS protein family, member 2 -0.0201849
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0200319
RPS29 ribosomal protein S29 -0.0198028
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0197615
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0195921
SRGN serglycin -0.0192221
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.01893
RPS21 ribosomal protein S21 -0.0188123
ACBD3 acyl-CoA binding domain containing 3 -0.0187626
RNF24 ring finger protein 24 -0.0187352
NCOA7 nuclear receptor coactivator 7 -0.0185156
S100A10 S100 calcium binding protein A10 -0.0185133
KLF6 Kruppel-like factor 6 -0.018452
RPL38 ribosomal protein L38 -0.0184296
MIS18BP1 MIS18 binding protein 1 -0.0183857
CEP95 centrosomal protein 95kDa -0.0182871
RPL8 ribosomal protein L8 -0.0182733
SPAG9 sperm associated antigen 9 -0.0180038
NPC1 Niemann-Pick disease, type C1 -0.0179942
RPLP0 ribosomal protein, large, P0 -0.0177964