carbohydrate Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
Description Any member of the class of organooxygen compounds that is a polyhydroxy-aldehyde or -ketone or a lactol resulting from their intramolecular condensation (monosaccharides); substances derived from these by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom; and polymeric products arising by intermolecular acetal formation between two or more such molecules (disaccharides, polysaccharides and oligosaccharides). Carbohydrates contain only carbon, hydrogen and oxygen atoms; prior to any oxidation or reduction, most have the empirical formula Cm(H2O)n. Compounds obtained from carbohydrates by substitution, etc., are known as carbohydrate derivatives and may contain other elements. Cyclitols are generally not regarded as carbohydrates. (Chemical Entities of Biological Interest Ontology, CHEBI_16646)
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Genes

137 genes co-occuring with the biological term carbohydrate in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1
ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif, 13
ADH1B alcohol dehydrogenase 1B (class I), beta polypeptide
ADIPOQ adiponectin, C1Q and collagen domain containing
ADRB2 adrenoceptor beta 2, surface
ADRB3 adrenoceptor beta 3
AFP alpha-fetoprotein
AGRP agouti related neuropeptide
AGT angiotensinogen (serpin peptidase inhibitor, clade A, member 8)
AHSG alpha-2-HS-glycoprotein
AMY2A amylase, alpha 2A (pancreatic)
APCS amyloid P component, serum
APOA5 apolipoprotein A-V
APOH apolipoprotein H (beta-2-glycoprotein I)
B3GAT1 beta-1,3-glucuronyltransferase 1
B3GAT2 beta-1,3-glucuronyltransferase 2
B3GNT2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
CASP3 caspase 3, apoptosis-related cysteine peptidase
CCL2 chemokine (C-C motif) ligand 2
CD207 CD207 molecule, langerin
CD209 CD209 molecule
CD44 CD44 molecule (Indian blood group)
CD52 CD52 molecule
CD63 CD63 molecule
CD86 CD86 molecule
CDH2 cadherin 2, type 1, N-cadherin (neuronal)
CEACAM3 carcinoembryonic antigen-related cell adhesion molecule 3
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5
CEL carboxyl ester lipase
CETP cholesteryl ester transfer protein, plasma
CGA glycoprotein hormones, alpha polypeptide
CGB chorionic gonadotropin, beta polypeptide
CHST14 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14
CLEC4M C-type lectin domain family 4, member M
CLEC7A C-type lectin domain family 7, member A
CLGN calmegin
COL4A1 collagen, type IV, alpha 1
CRY1 cryptochrome circadian clock 1
CXCL8 chemokine (C-X-C motif) ligand 8
DCN decorin
DMD dystrophin
EDN1 endothelin 1
EEF2 eukaryotic translation elongation factor 2
EGF epidermal growth factor
ELANE elastase, neutrophil expressed
EPM2A epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)
EPO erythropoietin
F10 coagulation factor X
F3 coagulation factor III (thromboplastin, tissue factor)
F5 coagulation factor V (proaccelerin, labile factor)
F7 coagulation factor VII (serum prothrombin conversion accelerator)
F8 coagulation factor VIII, procoagulant component
FASLG Fas ligand (TNF superfamily, member 6)
FBXO32 F-box protein 32
FOLH1 folate hydrolase (prostate-specific membrane antigen) 1
FSTL3 follistatin-like 3 (secreted glycoprotein)
FTO fat mass and obesity associated
FUT2 fucosyltransferase 2 (secretor status included)
FUT6 fucosyltransferase 6 (alpha (1,3) fucosyltransferase)
GCG glucagon
GCK glucokinase (hexokinase 4)
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
GHRL ghrelin/obestatin prepropeptide
GIPR gastric inhibitory polypeptide receptor
GYPA glycophorin A (MNS blood group)
HAMP hepcidin antimicrobial peptide
HSPA1A heat shock 70kDa protein 1A
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
IFNG interferon, gamma
IGF1R insulin-like growth factor 1 receptor
IGHA1 immunoglobulin heavy constant alpha 1
IGHD immunoglobulin heavy constant delta
IL10 interleukin 10
IL2 interleukin 2
IL2RA interleukin 2 receptor, alpha
IL36RN interleukin 36 receptor antagonist
IL5RA interleukin 5 receptor, alpha
IL6 interleukin 6
IRS1 insulin receptor substrate 1
KITLG KIT ligand
LAMC1 laminin, gamma 1 (formerly LAMB2)
LEP leptin
LGALS1 lectin, galactoside-binding, soluble, 1
LGALS3 lectin, galactoside-binding, soluble, 3
LGALS4 lectin, galactoside-binding, soluble, 4
LGALS8 lectin, galactoside-binding, soluble, 8
LGALS9 lectin, galactoside-binding, soluble, 9
LGALS9C lectin, galactoside-binding, soluble, 9C
LIPC lipase, hepatic
LPL lipoprotein lipase
LY96 lymphocyte antigen 96
MAPK14 mitogen-activated protein kinase 14
MAPT microtubule-associated protein tau
MEP1B meprin A, beta
MLXIPL MLX interacting protein-like
MSTN myostatin
MTHFR methylenetetrahydrofolate reductase (NAD(P)H)
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MUC1 mucin 1, cell surface associated
MUC16 mucin 16, cell surface associated
MUC4 mucin 4, cell surface associated
MUC5AC mucin 5AC, oligomeric mucus/gel-forming
NPY neuropeptide Y
NR1H4 nuclear receptor subfamily 1, group H, member 4
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
PDPN podoplanin
PLIN1 perilipin 1
PLTP phospholipid transfer protein
PNPLA3 patatin-like phospholipase domain containing 3
PPY pancreatic polypeptide
PRKAA1 protein kinase, AMP-activated, alpha 1 catalytic subunit
PRKCSH protein kinase C substrate 80K-H
PYY peptide YY
RBP4 retinol binding protein 4, plasma
REG3A regenerating islet-derived 3 alpha
REG4 regenerating islet-derived family, member 4
RPS6KA1 ribosomal protein S6 kinase, 90kDa, polypeptide 1
SCARB1 scavenger receptor class B, member 1
SELPLG selectin P ligand
SERPINB3 serpin peptidase inhibitor, clade B (ovalbumin), member 3
SFTPA1 surfactant protein A1
SFTPA2 surfactant protein A2
SFTPD surfactant protein D
SIGLEC5 sialic acid binding Ig-like lectin 5
SIRT1 sirtuin 1
SLC16A4 solute carrier family 16, member 4
SLC25A13 solute carrier family 25 (aspartate/glutamate carrier), member 13
SLC2A4 solute carrier family 2 (facilitated glucose transporter), member 4
SMURF1 SMAD specific E3 ubiquitin protein ligase 1
SREBF1 sterol regulatory element binding transcription factor 1
TAS2R38 taste receptor, type 2, member 38
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box)
TLR4 toll-like receptor 4
TNR tenascin R
TXNIP thioredoxin interacting protein
UMOD uromodulin
XBP1 X-box binding protein 1