carcinoma Gene Set

Dataset Phosphosite Textmining Biological Term Annotations
Category structural or functional annotations
Type biological term
Description A type of malignant cancer that arises from epithelial cells tending to infiltrate the surrounding tissues and give rise to metastases. (Experimental Factor Ontology, EFO_0000313)
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Genes

282 proteins co-occuring with the biological term carcinoma in abstracts of publications describing phosphosites from the Phosphosite Textmining Biological Term Annotations dataset.

Symbol Name
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase
ACACA acetyl-CoA carboxylase alpha
ACTN4 actinin, alpha 4
ADD1 adducin 1 (alpha)
ADD3 adducin 3 (gamma)
ADRB2 adrenoceptor beta 2, surface
AHR aryl hydrocarbon receptor
AKT1 v-akt murine thymoma viral oncogene homolog 1
AKT2 v-akt murine thymoma viral oncogene homolog 2
AKT3 v-akt murine thymoma viral oncogene homolog 3
ANXA2 annexin A2
APC adenomatous polyposis coli
AR androgen receptor
ARAP1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
ARAP3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
ARHGAP5 Rho GTPase activating protein 5
ARHGEF2 Rho/Rac guanine nucleotide exchange factor (GEF) 2
ASCL1 achaete-scute family bHLH transcription factor 1
ATF2 activating transcription factor 2
ATF4 activating transcription factor 4
ATM ATM serine/threonine kinase
ATR ATR serine/threonine kinase
AURKA aurora kinase A
BAD BCL2-associated agonist of cell death
BCAR1 breast cancer anti-estrogen resistance 1
BCL10 B-cell CLL/lymphoma 10
BCL2L11 BCL2-like 11 (apoptosis facilitator)
BIRC5 baculoviral IAP repeat containing 5
BMX BMX non-receptor tyrosine kinase
BRCA1 breast cancer 1, early onset
BRIP1 BRCA1 interacting protein C-terminal helicase 1
CA9 carbonic anhydrase IX
CARD9 caspase recruitment domain family, member 9
CASP1 caspase 1, apoptosis-related cysteine peptidase
CASP7 caspase 7, apoptosis-related cysteine peptidase
CAV1 caveolin 1, caveolae protein, 22kDa
CCDC6 coiled-coil domain containing 6
CCDC88A coiled-coil domain containing 88A
CCND1 cyclin D1
CDC25A cell division cycle 25A
CDC25C cell division cycle 25C
CDCA5 cell division cycle associated 5
CDCA8 cell division cycle associated 8
CDCP1 CUB domain containing protein 1
CDK1 cyclin-dependent kinase 1
CDK2 cyclin-dependent kinase 2
CDK5 cyclin-dependent kinase 5
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
CDX2 caudal type homeobox 2
CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)
CEBPA CCAAT/enhancer binding protein (C/EBP), alpha
CEBPB CCAAT/enhancer binding protein (C/EBP), beta
CELF1 CUGBP, Elav-like family member 1
CFL1 cofilin 1 (non-muscle)
CGA glycoprotein hormones, alpha polypeptide
CHEK1 checkpoint kinase 1
CHEK2 checkpoint kinase 2
CHUK conserved helix-loop-helix ubiquitous kinase
CLDN7 claudin 7
CREB1 cAMP responsive element binding protein 1
CRK v-crk avian sarcoma virus CT10 oncogene homolog
CROCC ciliary rootlet coiled-coil, rootletin
CSF1R colony stimulating factor 1 receptor
CSNK2B casein kinase 2, beta polypeptide
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CTNND1 catenin (cadherin-associated protein), delta 1
CTNND2 catenin (cadherin-associated protein), delta 2
CTTN cortactin
CUX1 cut-like homeobox 1
DAXX death-domain associated protein
DCD dermcidin
DLGAP5 discs, large (Drosophila) homolog-associated protein 5
DNM2 dynamin 2
DOK1 docking protein 1, 62kDa (downstream of tyrosine kinase 1)
DPYSL2 dihydropyrimidinase-like 2
EGFR epidermal growth factor receptor
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2
EIF2B5 eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa
EIF2S1 eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
EIF4E eukaryotic translation initiation factor 4E
EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1
ELAVL1 ELAV like RNA binding protein 1
ELK1 ELK1, member of ETS oncogene family
ENAH enabled homolog (Drosophila)
ENO1 enolase 1, (alpha)
EPHA2 EPH receptor A2
EPHB1 EPH receptor B1
ERBB2 erb-b2 receptor tyrosine kinase 2
ESR1 estrogen receptor 1
ESR2 estrogen receptor 2 (ER beta)
ESRRA estrogen-related receptor alpha
EZR ezrin
FAM84A family with sequence similarity 84, member A
FBXO4 F-box protein 4
FER fer (fps/fes related) tyrosine kinase
FGF2 fibroblast growth factor 2 (basic)
FGFR3 fibroblast growth factor receptor 3
FHIT fragile histidine triad
FLCN folliculin
FOSL1 FOS-like antigen 1
FOXA2 forkhead box A2
FOXO1 forkhead box O1
FOXO3 forkhead box O3
FSCN1 fascin actin-bundling protein 1
FYN FYN proto-oncogene, Src family tyrosine kinase
GATA1 GATA binding protein 1 (globin transcription factor 1)
GIT1 G protein-coupled receptor kinase interacting ArfGAP 1
GJA1 gap junction protein, alpha 1, 43kDa
GLI1 GLI family zinc finger 1
GLUL glutamate-ammonia ligase
GNB2L1 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
GRB7 growth factor receptor-bound protein 7
GSK3A glycogen synthase kinase 3 alpha
GSK3B glycogen synthase kinase 3 beta
H2AFX H2A histone family, member X
HAVCR2 hepatitis A virus cellular receptor 2
HCN2 hyperpolarization activated cyclic nucleotide gated potassium channel 2
HIST1H3A histone cluster 1, H3a
HMGA1 high mobility group AT-hook 1
HMGB1 high mobility group box 1
HNF1A HNF1 homeobox A
HNF4A hepatocyte nuclear factor 4, alpha
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1
HSPB1 heat shock 27kDa protein 1
IGFBP1 insulin-like growth factor binding protein 1
IGFBP3 insulin-like growth factor binding protein 3
IGFBP6 insulin-like growth factor binding protein 6
IKBKB inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta
IL6ST interleukin 6 signal transducer
IP6K2 inositol hexakisphosphate kinase 2
IRS1 insulin receptor substrate 1
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
ITGB4 integrin, beta 4
JUN jun proto-oncogene
JUND jun D proto-oncogene
KDR kinase insert domain receptor
KRT18 keratin 18, type I
KRT8 keratin 8, type II
KSR1 kinase suppressor of ras 1
L1CAM L1 cell adhesion molecule
LASP1 LIM and SH3 protein 1
LCK LCK proto-oncogene, Src family tyrosine kinase
LCP1 lymphocyte cytosolic protein 1 (L-plastin)
LGALS3 lectin, galactoside-binding, soluble, 3
LIMK1 LIM domain kinase 1
LIMK2 LIM domain kinase 2
LTA4H leukotriene A4 hydrolase
LYN LYN proto-oncogene, Src family tyrosine kinase
MAGEA11 melanoma antigen family A11
MAP2K1 mitogen-activated protein kinase kinase 1
MAP2K2 mitogen-activated protein kinase kinase 2
MAP2K4 mitogen-activated protein kinase kinase 4
MAP3K11 mitogen-activated protein kinase kinase kinase 11
MAP3K5 mitogen-activated protein kinase kinase kinase 5
MAP3K7 mitogen-activated protein kinase kinase kinase 7
MAPK1 mitogen-activated protein kinase 1
MAPK14 mitogen-activated protein kinase 14
MAPK3 mitogen-activated protein kinase 3
MAPK8 mitogen-activated protein kinase 8
MAPK9 mitogen-activated protein kinase 9
MAPKAPK2 mitogen-activated protein kinase-activated protein kinase 2
MARCKSL1 MARCKS-like 1
MBP myelin basic protein
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase
MET MET proto-oncogene, receptor tyrosine kinase
MKL1 megakaryoblastic leukemia (translocation) 1
MMP14 matrix metallopeptidase 14 (membrane-inserted)
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MUC1 mucin 1, cell surface associated
MVP major vault protein
MYC v-myc avian myelocytomatosis viral oncogene homolog
MYL12B myosin, light chain 12B, regulatory
NANOG Nanog homeobox
NCOA2 nuclear receptor coactivator 2
NCOA3 nuclear receptor coactivator 3
NEUROG1 neurogenin 1
NFE2L2 nuclear factor, erythroid 2-like 2
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha
NKX2-1 NK2 homeobox 1
NME1 NME/NM23 nucleoside diphosphate kinase 1
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NPY1R neuropeptide Y receptor Y1
NR1I2 nuclear receptor subfamily 1, group I, member 2
NR1I3 nuclear receptor subfamily 1, group I, member 3
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
NUTM1 NUT midline carcinoma, family member 1
PAK1 p21 protein (Cdc42/Rac)-activated kinase 1
PDGFRA platelet-derived growth factor receptor, alpha polypeptide
PDGFRB platelet-derived growth factor receptor, beta polypeptide
PDHA1 pyruvate dehydrogenase (lipoamide) alpha 1
PDPK1 3-phosphoinositide dependent protein kinase 1
PEBP1 phosphatidylethanolamine binding protein 1
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
PHGDH phosphoglycerate dehydrogenase
PHLDA1 pleckstrin homology-like domain, family A, member 1
PKM pyruvate kinase, muscle
PLAU plasminogen activator, urokinase
PLCG1 phospholipase C, gamma 1
PLD2 phospholipase D2
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
PPP1R12A protein phosphatase 1, regulatory subunit 12A
PRKAA1 protein kinase, AMP-activated, alpha 1 catalytic subunit
PRKCB protein kinase C, beta
PRKCD protein kinase C, delta
PRKCE protein kinase C, epsilon
PRKCZ protein kinase C, zeta
PRKD1 protein kinase D1
PRKDC protein kinase, DNA-activated, catalytic polypeptide
PRLR prolactin receptor
PTEN phosphatase and tensin homolog
PTGES3 prostaglandin E synthase 3 (cytosolic)
PTK2 protein tyrosine kinase 2
PTK2B protein tyrosine kinase 2 beta
PTK6 protein tyrosine kinase 6
PTPN11 protein tyrosine phosphatase, non-receptor type 11
PTTG1IP pituitary tumor-transforming 1 interacting protein
PXN paxillin
RAD52 RAD52 homolog (S. cerevisiae)
RAF1 Raf-1 proto-oncogene, serine/threonine kinase
RALB v-ral simian leukemia viral oncogene homolog B
RALBP1 ralA binding protein 1
RAP1B RAP1B, member of RAS oncogene family
RARA retinoic acid receptor, alpha
RB1 retinoblastoma 1
RBL2 retinoblastoma-like 2
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A
RET ret proto-oncogene
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit
RORA RAR-related orphan receptor A
RPS6 ribosomal protein S6
RPS6KA1 ribosomal protein S6 kinase, 90kDa, polypeptide 1
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1
RPTOR regulatory associated protein of MTOR, complex 1
RXRA retinoid X receptor, alpha
S100A9 S100 calcium binding protein A9
SDC4 syndecan 4
SEC14L2 SEC14-like 2 (S. cerevisiae)
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1
SHC1 SHC (Src homology 2 domain containing) transforming protein 1
SIRT1 sirtuin 1
SMAD1 SMAD family member 1
SMAD2 SMAD family member 2
SMAD3 SMAD family member 3
SMAD5 SMAD family member 5
SMPD1 sphingomyelin phosphodiesterase 1, acid lysosomal
SNAI1 snail family zinc finger 1
SP1 Sp1 transcription factor
SRC SRC proto-oncogene, non-receptor tyrosine kinase
STARD10 StAR-related lipid transfer (START) domain containing 10
STAT1 signal transducer and activator of transcription 1, 91kDa
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
STAT5A signal transducer and activator of transcription 5A
STMN1 stathmin 1
SUGT1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
SYK spleen tyrosine kinase
TACSTD2 tumor-associated calcium signal transducer 2
TAGLN2 transgelin 2
TCP1 t-complex 1
TERF1 telomeric repeat binding factor (NIMA-interacting) 1
TFRC transferrin receptor
TGFBR2 transforming growth factor, beta receptor II (70/80kDa)
TLR4 toll-like receptor 4
TOP2A topoisomerase (DNA) II alpha 170kDa
TP53 tumor protein p53
TP63 tumor protein p63
TRIP6 thyroid hormone receptor interactor 6
TSC2 tuberous sclerosis 2
TWIST1 twist family bHLH transcription factor 1
UBA1 ubiquitin-like modifier activating enzyme 1
UBE2I ubiquitin-conjugating enzyme E2I
URI1 URI1, prefoldin-like chaperone
USP10 ubiquitin specific peptidase 10
VASP vasodilator-stimulated phosphoprotein
VHL von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase
VIM vimentin
WWOX WW domain containing oxidoreductase
XPA xeroderma pigmentosum, complementation group A
YAP1 Yes-associated protein 1
YBX1 Y box binding protein 1
YES1 YES proto-oncogene 1, Src family tyrosine kinase