cdc73/paf1 complex Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A multiprotein complex that associates with RNA polymerase II and general RNA polymerase II transcription factor complexes and may be involved in both transcriptional initiation and elongation. In Saccharomyces the complex contains Paf1p, Cdc73p, Ctr9p, Rtf1p, and Leo1p. (Gene Ontology, GO_0016593)
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47 proteins co-occuring with the cdc73/paf1 complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
RTF1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 2.70191
CTR9 CTR9, Paf1/RNA polymerase II complex component 2.43507
CDC73 cell division cycle 73 2.37797
LEO1 Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 2.28533
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 1.44573
HIST2H2BF histone cluster 2, H2bf 1.42711
HIST1H2BH histone cluster 1, H2bh 1.42711
HIST3H2BB histone cluster 3, H2bb 1.42711
HIST1H2BD histone cluster 1, H2bd 1.42655
HIST1H2BF histone cluster 1, H2bf 1.42429
HIST1H2BC histone cluster 1, H2bc 1.42429
HIST1H2BA histone cluster 1, H2ba 1.42317
SETD1A SET domain containing 1A 1.22932
HIST2H3PS2 histone cluster 2, H3, pseudogene 2 1.14801
H3F3A H3 histone, family 3A 1.14341
H3F3B H3 histone, family 3B (H3.3B) 1.14341
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.959748
SETD2 SET domain containing 2 0.950665
CHD1 chromodomain helicase DNA binding protein 1 0.918579
INTS6 integrator complex subunit 6 0.818075
RRP12 ribosomal RNA processing 12 homolog (S. cerevisiae) 0.709251
SUPT4H1 suppressor of Ty 4 homolog 1 (S. cerevisiae) 0.646574
SSU72 SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) 0.620104
HERC5 HECT and RLD domain containing E3 ubiquitin protein ligase 5 0.577581
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.564677
ELF5 E74-like factor 5 (ets domain transcription factor) 0.551012
WDR61 WD repeat domain 61 0.54194
CDK9 cyclin-dependent kinase 9 0.53906
PHF6 PHD finger protein 6 0.518573
AFF1 AF4/FMR2 family, member 1 0.492966
RNF20 ring finger protein 20, E3 ubiquitin protein ligase 0.478038
AFF4 AF4/FMR2 family, member 4 0.456809
PEG3 paternally expressed 3 0.382739
EOMES eomesodermin 0.353662
LSM4 LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) 0.318205
MLLT1 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 0.315212
ELL elongation factor RNA polymerase II 0.271167
SNRPN small nuclear ribonucleoprotein polypeptide N 0.266408
POLI polymerase (DNA directed) iota 0.264215
CPSF3 cleavage and polyadenylation specific factor 3, 73kDa 0.244601
CPSF1 cleavage and polyadenylation specific factor 1, 160kDa 0.238119
CARM1 coactivator-associated arginine methyltransferase 1 0.234891
SOX17 SRY (sex determining region Y)-box 17 0.234174
NSMF NMDA receptor synaptonuclear signaling and neuronal migration factor 0.202684
NANOG Nanog homeobox 0.19307
GATA6 GATA binding protein 6 0.192746
GLI2 GLI family zinc finger 2 0.16342