chondroitin sulfate metabolic process Gene Set

Dataset GO Biological Process Annotations 2023
Category structural or functional annotations
Type biological process
Description The chemical reactions and pathways involving chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate. They usually occur linked to a protein to form proteoglycans. Two subgroups exist, one in which the sulfate is on the 4-position (chondroitin sulfate A) and the second in which it is in the 6-position (chondroitin sulfate C). They often are polydisperse and often differ in the degree of sulfation from tissue to tissue. The chains of repeating disaccharide are covalently linked to the side chains of serine residues in the polypeptide backbone of a protein by a glycosidic attachment through the trisaccharide unit galactosyl-galactosyl-xylosyl. Chondroitin sulfate B is more usually known as dermatan sulfate. (Gene Ontology, GO_0030204)
External Link http://amigo.geneontology.org/amigo/term/GO_0030204
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Genes

17 genes participating in the chondroitin sulfate metabolic process biological process from the curated GO Biological Process Annotations 2023 dataset.

Symbol Name
CHPF chondroitin polymerizing factor
CHPF2 chondroitin polymerizing factor 2
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11
CHST12 carbohydrate (chondroitin 4) sulfotransferase 12
CHST13 carbohydrate (chondroitin 4) sulfotransferase 13
CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
CHST3 carbohydrate (chondroitin 6) sulfotransferase 3
CHST7 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7
CHST9 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
CHSY1 chondroitin sulfate synthase 1
CHSY3 chondroitin sulfate synthase 3
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1
CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2
DSE dermatan sulfate epimerase
DSEL dermatan sulfate epimerase-like
NDNF neuron-derived neurotrophic factor
UGDH UDP-glucose 6-dehydrogenase