chromosomal Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

373 genes co-occuring with the biological term chromosomal in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase
ACBD3 acyl-CoA binding domain containing 3
ADAM12 ADAM metallopeptidase domain 12
AGO1 argonaute RISC catalytic component 1
AICDA activation-induced cytidine deaminase
AKAP8 A kinase (PRKA) anchor protein 8
AMIGO2 adhesion molecule with Ig-like domain 2
APC adenomatous polyposis coli
APLF aprataxin and PNKP like factor
APOB apolipoprotein B
AQP9 aquaporin 9
ARF6 ADP-ribosylation factor 6
ARHGAP22 Rho GTPase activating protein 22
ARID1A AT rich interactive domain 1A (SWI-like)
ASPA aspartoacylase
ATM ATM serine/threonine kinase
ATR ATR serine/threonine kinase
ATRX alpha thalassemia/mental retardation syndrome X-linked
ATXN7L3B ataxin 7-like 3B
AURKA aurora kinase A
AURKB aurora kinase B
AURKC aurora kinase C
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2
BCL11A B-cell CLL/lymphoma 11A (zinc finger protein)
BCL2 B-cell CLL/lymphoma 2
BCL6 B-cell CLL/lymphoma 6
BCR breakpoint cluster region
BDNF brain-derived neurotrophic factor
BEX2 brain expressed X-linked 2
BHLHA9 basic helix-loop-helix family, member a9
BIRC5 baculoviral IAP repeat containing 5
BLMH bleomycin hydrolase
BMI1 BMI1 proto-oncogene, polycomb ring finger
BOP1 block of proliferation 1
BRAF B-Raf proto-oncogene, serine/threonine kinase
BRCA1 breast cancer 1, early onset
BRCA2 breast cancer 2, early onset
BRD2 bromodomain containing 2
BUB1 BUB1 mitotic checkpoint serine/threonine kinase
BUB1B BUB1 mitotic checkpoint serine/threonine kinase B
CAPN1 calpain 1, (mu/I) large subunit
CASZ1 castor zinc finger 1
CBFB core-binding factor, beta subunit
CBX5 chromobox homolog 5
CCNB1 cyclin B1
CCNB2 cyclin B2
CCND1 cyclin D1
CCND2 cyclin D2
CCR2 chemokine (C-C motif) receptor 2
CCSER1 coiled-coil serine-rich protein 1
CDCA5 cell division cycle associated 5
CDCA8 cell division cycle associated 8
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CDK1 cyclin-dependent kinase 1
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CDKN2A cyclin-dependent kinase inhibitor 2A
CDT1 chromatin licensing and DNA replication factor 1
CENPA centromere protein A
CENPC centromere protein C
CEP57 centrosomal protein 57kDa
CFHR2 complement factor H-related 2
CFHR5 complement factor H-related 5
CHD2 chromodomain helicase DNA binding protein 2
CHEK1 checkpoint kinase 1
CHEK2 checkpoint kinase 2
CIITA class II, major histocompatibility complex, transactivator
CLEC16A C-type lectin domain family 16, member A
COL1A1 collagen, type I, alpha 1
CRHR1 corticotropin releasing hormone receptor 1
CST9L cystatin 9-like
CTCF CCCTC-binding factor (zinc finger protein)
CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CUX1 cut-like homeobox 1
CXCR4 chemokine (C-X-C motif) receptor 4
CYP21A2 cytochrome P450, family 21, subfamily A, polypeptide 2
CYP2E1 cytochrome P450, family 2, subfamily E, polypeptide 1
DDIT3 DNA-damage-inducible transcript 3
DEK DEK proto-oncogene
DFFB DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase)
DNMT1 DNA (cytosine-5-)-methyltransferase 1
DNMT3B DNA (cytosine-5-)-methyltransferase 3 beta
DNMT3L DNA (cytosine-5-)-methyltransferase 3-like
DOCK4 dedicator of cytokinesis 4
DPYSL3 dihydropyrimidinase-like 3
DROSHA drosha, ribonuclease type III
DUOX1 dual oxidase 1
DUP22Q11.2 Chromosome 22q11.2 microduplication syndrome
DYM dymeclin
E2F1 E2F transcription factor 1
EGFR epidermal growth factor receptor
EP300 E1A binding protein p300
EPAS1 endothelial PAS domain protein 1
EPB41 erythrocyte membrane protein band 4.1
EPC1 enhancer of polycomb homolog 1 (Drosophila)
EPHX1 epoxide hydrolase 1, microsomal (xenobiotic)
ERBB2 erb-b2 receptor tyrosine kinase 2
ERCC2 excision repair cross-complementation group 2
ERCC5 excision repair cross-complementation group 5
ESR1 estrogen receptor 1
ETV6 ets variant 6
EWSR1 EWS RNA-binding protein 1
F8 coagulation factor VIII, procoagulant component
FAN1 FANCD2/FANCI-associated nuclease 1
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
FGFR1 fibroblast growth factor receptor 1
FGFR3 fibroblast growth factor receptor 3
FIP1L1 factor interacting with PAPOLA and CPSF1
FMN1 formin 1
FOS FBJ murine osteosarcoma viral oncogene homolog
FOXC1 forkhead box C1
FOXO1 forkhead box O1
FOXO3 forkhead box O3
FOXO4 forkhead box O4
FRA11F fragile site, aphidicolin type, common, fra(11)(q14.2)
FRA16D fragile site, aphidicolin type, common, fra(16)(q23.2)
FRA1B fragile site, aphidicolin type, common, fra(1)(p32)
FUS FUS RNA binding protein
FYN FYN proto-oncogene, Src family tyrosine kinase
GADD45A growth arrest and DNA-damage-inducible, alpha
GAL galanin/GMAP prepropeptide
GALR1 galanin receptor 1
GATA1 GATA binding protein 1 (globin transcription factor 1)
GJC2 gap junction protein, gamma 2, 47kDa
GLI3 GLI family zinc finger 3
GMCL1 germ cell-less, spermatogenesis associated 1
GMNN geminin, DNA replication inhibitor
GNPDA1 glucosamine-6-phosphate deaminase 1
GPA33 glycoprotein A33 (transmembrane)
GREM1 gremlin 1, DAN family BMP antagonist
GSG2 germ cell associated 2 (haspin)
GSK3B glycogen synthase kinase 3 beta
GSTM1 glutathione S-transferase mu 1
GSTT1 glutathione S-transferase theta 1
H2AFX H2A histone family, member X
HAND2 heart and neural crest derivatives expressed 2
HAUS8 HAUS augmin-like complex, subunit 8
HBB hemoglobin, beta
HDAC11 histone deacetylase 11
HDAC9 histone deacetylase 9
HELB helicase (DNA) B
HIPK2 homeodomain interacting protein kinase 2
HMGA1 high mobility group AT-hook 1
HMGA2 high mobility group AT-hook 2
HMGB1 high mobility group box 1
HOXC13 homeobox C13
HOXD13 homeobox D13
HOXD9 homeobox D9
HRES1 HTLV-1 related endogenous sequence
HS6ST1 heparan sulfate 6-O-sulfotransferase 1
HS6ST2 heparan sulfate 6-O-sulfotransferase 2
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein
IFNG interferon, gamma
IGH immunoglobulin heavy locus
IL15 interleukin 15
IL15RA interleukin 15 receptor, alpha
INCENP inner centromere protein antigens 135/155kDa
INS insulin
INSR insulin receptor
IRF4 interferon regulatory factor 4
ITGAV integrin, alpha V
JAK2 Janus kinase 2
JUP junction plakoglobin
KAT2B K(lysine) acetyltransferase 2B
KCNC2 potassium channel, voltage gated Shaw related subfamily C, member 2
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1
KDM1A lysine (K)-specific demethylase 1A
KIAA0196 KIAA0196
KIF20A kinesin family member 20A
KIFC1 kinesin family member C1
KLHDC8B kelch domain containing 8B
KMT2A lysine (K)-specific methyltransferase 2A
KMT2D lysine (K)-specific methyltransferase 2D
KMT2E lysine (K)-specific methyltransferase 2E
KRAS Kirsten rat sarcoma viral oncogene homolog
KYNU kynureninase
LAMP2 lysosomal-associated membrane protein 2
LATS1 large tumor suppressor kinase 1
LGI1 leucine-rich, glioma inactivated 1
LGI2 leucine-rich repeat LGI family, member 2
LIG4 ligase IV, DNA, ATP-dependent
LMNA lamin A/C
LMNB1 lamin B1
LNX1 ligand of numb-protein X 1, E3 ubiquitin protein ligase
LPL lipoprotein lipase
LSAMP limbic system-associated membrane protein
MAD2L1 MAD2 mitotic arrest deficient-like 1 (yeast)
MAD2L1BP MAD2L1 binding protein
MAK male germ cell-associated kinase
MALT1 MALT1 paracaspase
MAP3K13 mitogen-activated protein kinase kinase kinase 13
MAPK8 mitogen-activated protein kinase 8
MAPRE2 microtubule-associated protein, RP/EB family, member 2
MAPT microtubule-associated protein tau
MBD4 methyl-CpG binding domain protein 4
MCM3AP minichromosome maintenance complex component 3 associated protein
MCPH1 microcephalin 1
MDC1 mediator of DNA-damage checkpoint 1
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase
MGEA5 meningioma expressed antigen 5 (hyaluronidase)
MIR107 microRNA 107
MIR185 microRNA 185
MIR371A microRNA 371a
MIR512-1 microRNA 512-1
MIR517A microRNA 517a
MIR519A1 microRNA 519a-1
MLH1 mutL homolog 1
MLLT1 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
MNX1 motor neuron and pancreas homeobox 1
MOB1A MOB kinase activator 1A
MPO myeloperoxidase
MRE11A MRE11 meiotic recombination 11 homolog A (S. cerevisiae)
MSH2 mutS homolog 2
MTA1 metastasis associated 1
MTHFR methylenetetrahydrofolate reductase (NAD(P)H)
MUS81 MUS81 structure-specific endonuclease subunit
MYBL2 v-myb avian myeloblastosis viral oncogene homolog-like 2
MYC v-myc avian myelocytomatosis viral oncogene homolog
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog
MYH11 myosin, heavy chain 11, smooth muscle
MYH9 myosin, heavy chain 9, non-muscle
MYP3 myopia 3 (high grade, autosomal dominant)
NAA60 N(alpha)-acetyltransferase 60, NatF catalytic subunit
NBN nibrin
NDUFA1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa
NHEJ1 nonhomologous end-joining factor 1
NIPBL Nipped-B homolog (Drosophila)
NME1 NME/NM23 nucleoside diphosphate kinase 1
NOTCH1 notch 1
NPC1 Niemann-Pick disease, type C1
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NQO1 NAD(P)H dehydrogenase, quinone 1
NR5A1 nuclear receptor subfamily 5, group A, member 1
NRXN1 neurexin 1
NUCLEOLIN nucleolin multifunctional protein
NUP98 nucleoporin 98kDa
OGG1 8-oxoguanine DNA glycosylase
OGT O-linked N-acetylglucosamine (GlcNAc) transferase
ORMDL3 ORMDL sphingolipid biosynthesis regulator 3
OTC ornithine carbamoyltransferase
OTX2 orthodenticle homeobox 2
PADI1 peptidyl arginine deiminase, type I
PADI3 peptidyl arginine deiminase, type III
PARK2 parkin RBR E3 ubiquitin protein ligase
PARK7 parkinson protein 7
PARP1 poly (ADP-ribose) polymerase 1
PARP3 poly (ADP-ribose) polymerase family, member 3
PAX6 paired box 6
PAX8 paired box 8
PCM1 pericentriolar material 1
PDGFB platelet-derived growth factor beta polypeptide
PDGFRA platelet-derived growth factor receptor, alpha polypeptide
PGAP3 post-GPI attachment to proteins 3
PICALM phosphatidylinositol binding clathrin assembly protein
PLAG1 pleiomorphic adenoma gene 1
PLK1 polo-like kinase 1
PLK4 polo-like kinase 4
PLSCR1 phospholipid scramblase 1
PLXDC2 plexin domain containing 2
PMM2 phosphomannomutase 2
POLL polymerase (DNA directed), lambda
POT1 protection of telomeres 1
PPARG peroxisome proliferator-activated receptor gamma
PPP1R13L protein phosphatase 1, regulatory subunit 13 like
PRODH proline dehydrogenase (oxidase) 1
PSIP1 PC4 and SFRS1 interacting protein 1
PSME3 proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)
PTEN phosphatase and tensin homolog
PTH parathyroid hormone
PTN pleiotrophin
PTTG1 pituitary tumor-transforming 1
PYCARD PYD and CARD domain containing
RAB27B RAB27B, member RAS oncogene family
RAD21 RAD21 homolog (S. pombe)
RAD50 RAD50 homolog (S. cerevisiae)
RAD51 RAD51 recombinase
RAD54B RAD54 homolog B (S. cerevisiae)
RAG1 recombination activating gene 1
RAG2 recombination activating gene 2
RAN RAN, member RAS oncogene family
RASSF1 Ras association (RalGDS/AF-6) domain family member 1
RASSF7 Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
RB1 retinoblastoma 1
RBBP8 retinoblastoma binding protein 8
RECQL RecQ helicase-like
RET ret proto-oncogene
RGMA repulsive guidance molecule family member a
RGS12 regulator of G-protein signaling 12
RNF20 ring finger protein 20, E3 ubiquitin protein ligase
RNF40 ring finger protein 40, E3 ubiquitin protein ligase
ROGDI rogdi homolog (Drosophila)
RPA2 replication protein A2, 32kDa
RRM1 ribonucleotide reductase M1
RUNX1 runt-related transcription factor 1
RUNX2 runt-related transcription factor 2
RUNX3 runt-related transcription factor 3
SCN1A sodium channel, voltage gated, type I alpha subunit
SETD2 SET domain containing 2
SFN stratifin
SGOL1 shugoshin-like 1 (S. pombe)
SHOX short stature homeobox
SIRT1 sirtuin 1
SIRT7 sirtuin 7
SIX1 SIX homeobox 1
SIX6 SIX homeobox 6
SLC24A4 solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
SLITRK1 SLIT and NTRK-like family, member 1
SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
SMC1A structural maintenance of chromosomes 1A
SMC3 structural maintenance of chromosomes 3
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5)
SPIN1 spindlin 1
SSB Sjogren syndrome antigen B (autoantigen La)
STAG3 stromal antigen 3
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
STAT5B signal transducer and activator of transcription 5B
STMN1 stathmin 1
SYCP3 synaptonemal complex protein 3
T T, brachyury homolog (mouse)
TACC1 transforming, acidic coiled-coil containing protein 1
TACC3 transforming, acidic coiled-coil containing protein 3
TERC telomerase RNA component
TERF1 telomeric repeat binding factor (NIMA-interacting) 1
TERF2 telomeric repeat binding factor 2
TERF2IP telomeric repeat binding factor 2, interacting protein
TERT telomerase reverse transcriptase
TFAM transcription factor A, mitochondrial
TFE3 transcription factor binding to IGHM enhancer 3
TGFBR3 transforming growth factor, beta receptor III
TIMELESS timeless circadian clock
TNF tumor necrosis factor
TNFRSF10C tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain
TNXB tenascin XB
TOMM40 translocase of outer mitochondrial membrane 40 homolog (yeast)
TOP2A topoisomerase (DNA) II alpha 170kDa
TOP2B topoisomerase (DNA) II beta 180kDa
TOP3B topoisomerase (DNA) III beta
TOPBP1 topoisomerase (DNA) II binding protein 1
TP53 tumor protein p53
TRB T cell receptor beta locus
TREX2 three prime repair exonuclease 2
TRIM36 tripartite motif containing 36
TROVE2 TROVE domain family, member 2
TRPC2 transient receptor potential cation channel, subfamily C, member 2, pseudogene
TSN translin
TSPY1 testis specific protein, Y-linked 1
TTK TTK protein kinase
TWIST1 twist family bHLH transcription factor 1
TXNDC2 thioredoxin domain containing 2 (spermatozoa)
TYMS thymidylate synthetase
UBD ubiquitin D
UGT1A7 UDP glucuronosyltransferase 1 family, polypeptide A7
UIMC1 ubiquitin interaction motif containing 1
USP9Y ubiquitin specific peptidase 9, Y-linked
VEGFA vascular endothelial growth factor A
VPS13B vacuolar protein sorting 13 homolog B (yeast)
WAPAL wings apart-like homolog (Drosophila)
WHSC1 Wolf-Hirschhorn syndrome candidate 1
WRN Werner syndrome, RecQ helicase-like
WWOX WW domain containing oxidoreductase
XPO1 exportin 1
XRCC1 X-ray repair complementing defective repair in Chinese hamster cells 1
XRCC3 X-ray repair complementing defective repair in Chinese hamster cells 3
XRCC4 X-ray repair complementing defective repair in Chinese hamster cells 4
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6
YBX1 Y box binding protein 1
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon
ZPBP2 zona pellucida binding protein 2