clinicopathologic Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

126 genes co-occuring with the biological term clinicopathologic in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
AFP alpha-fetoprotein
AKAP10 A kinase (PRKA) anchor protein 10
ALK anaplastic lymphoma receptor tyrosine kinase
ANG angiogenin, ribonuclease, RNase A family, 5
ARID1A AT rich interactive domain 1A (SWI-like)
ATF1 activating transcription factor 1
BCL2 B-cell CLL/lymphoma 2
BIRC3 baculoviral IAP repeat containing 3
BIRC5 baculoviral IAP repeat containing 5
BMI1 BMI1 proto-oncogene, polycomb ring finger
BRAF B-Raf proto-oncogene, serine/threonine kinase
C3 complement component 3
C9ORF72 chromosome 9 open reading frame 72
CA9 carbonic anhydrase IX
CAPS calcyphosine
CARM1 coactivator-associated arginine methyltransferase 1
CCL2 chemokine (C-C motif) ligand 2
CCNA2 cyclin A2
CCND1 cyclin D1
CCND3 cyclin D3
CCR5 chemokine (C-C motif) receptor 5 (gene/pseudogene)
CD24 CD24 molecule
CD276 CD276 molecule
CD44 CD44 molecule (Indian blood group)
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CDK6 cyclin-dependent kinase 6
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
CDKN2A cyclin-dependent kinase inhibitor 2A
CLDN7 claudin 7
CREB1 cAMP responsive element binding protein 1
CRTC1 CREB regulated transcription coactivator 1
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CTNND1 catenin (cadherin-associated protein), delta 1
CTTN cortactin
DKK3 dickkopf WNT signaling pathway inhibitor 3
EFEMP1 EGF containing fibulin-like extracellular matrix protein 1
EGFR epidermal growth factor receptor
ELK1 ELK1, member of ETS oncogene family
EPCAM epithelial cell adhesion molecule
ERBB2 erb-b2 receptor tyrosine kinase 2
ESR1 estrogen receptor 1
ESR2 estrogen receptor 2 (ER beta)
EWSR1 EWS RNA-binding protein 1
FABP5 fatty acid binding protein 5 (psoriasis-associated)
FGFR4 fibroblast growth factor receptor 4
FOXM1 forkhead box M1
FUS FUS RNA binding protein
GADD45A growth arrest and DNA-damage-inducible, alpha
GATA3 GATA binding protein 3
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HMGB1 high mobility group box 1
HOXA9 homeobox A9
HOXD3 homeobox D3
HRAS Harvey rat sarcoma viral oncogene homolog
HUS1 HUS1 checkpoint homolog (S. pombe)
HYLS1 hydrolethalus syndrome 1
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble
IGF1 insulin-like growth factor 1 (somatomedin C)
IGF1R insulin-like growth factor 1 receptor
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)
ITGAV integrin, alpha V
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)
KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
KLK11 kallikrein-related peptidase 11
KRAS Kirsten rat sarcoma viral oncogene homolog
LGALS1 lectin, galactoside-binding, soluble, 1
LGMN legumain
MALT1 MALT1 paracaspase
MAML2 mastermind-like 2 (Drosophila)
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase
MIR145 microRNA 145
MIR17 microRNA 17
MIR18A microRNA 18a
MIR19A microRNA 19a
MIR21 microRNA 21
MIR221 microRNA 221
MIR34A microRNA 34a
MIR93 microRNA 93
MIR96 microRNA 96
MLH1 mutL homolog 1
MME membrane metallo-endopeptidase
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MYC v-myc avian myelocytomatosis viral oncogene homolog
NEK7 NIMA-related kinase 7
NKX2-1 NK2 homeobox 1
NKX3-1 NK3 homeobox 1
NOD2 nucleotide-binding oligomerization domain containing 2
OCLN occludin
PCNA proliferating cell nuclear antigen
PDGFRA platelet-derived growth factor receptor, alpha polypeptide
PER3 period circadian clock 3
PIM1 Pim-1 proto-oncogene, serine/threonine kinase
PIM3 Pim-3 proto-oncogene, serine/threonine kinase
PKP1 plakophilin 1
PLK1 polo-like kinase 1
PRNP prion protein
PTGS1 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTTG1 pituitary tumor-transforming 1
RET ret proto-oncogene
ROR2 receptor tyrosine kinase-like orphan receptor 2
SDHB succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
SKP2 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase
SMAD4 SMAD family member 4
SNCG synuclein, gamma (breast cancer-specific protein 1)
SOD1 superoxide dismutase 1, soluble
SOD2 superoxide dismutase 2, mitochondrial
SOX4 SRY (sex determining region Y)-box 4
SPINK1 serine peptidase inhibitor, Kazal type 1
SPP1 secreted phosphoprotein 1
SRC SRC proto-oncogene, non-receptor tyrosine kinase
STAT1 signal transducer and activator of transcription 1, 91kDa
TARDBP TAR DNA binding protein
TERT telomerase reverse transcriptase
TP53 tumor protein p53
TP53BP1 tumor protein p53 binding protein 1
TSC1 tuberous sclerosis 1
USP22 ubiquitin specific peptidase 22
USP6 ubiquitin specific peptidase 6
VEGFA vascular endothelial growth factor A
VWF von Willebrand factor
WNT1 wingless-type MMTV integration site family, member 1
WNT5A wingless-type MMTV integration site family, member 5A
ZEB1 zinc finger E-box binding homeobox 1
ZNF148 zinc finger protein 148