clinicopathological Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

245 genes co-occuring with the biological term clinicopathological in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ADIPOQ adiponectin, C1Q and collagen domain containing
ADIPOR1 adiponectin receptor 1
ADIPOR2 adiponectin receptor 2
AFP alpha-fetoprotein
ALDH1A1 aldehyde dehydrogenase 1 family, member A1
ALK anaplastic lymphoma receptor tyrosine kinase
AMACR alpha-methylacyl-CoA racemase
ANG angiogenin, ribonuclease, RNase A family, 5
APAF1 apoptotic peptidase activating factor 1
APC adenomatous polyposis coli
AR androgen receptor
ARID1A AT rich interactive domain 1A (SWI-like)
ASNS asparagine synthetase (glutamine-hydrolyzing)
ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase
ATM ATM serine/threonine kinase
ATP6V0A1 ATPase, H+ transporting, lysosomal V0 subunit a1
ATXN1 ataxin 1
AURKB aurora kinase B
BAG1 BCL2-associated athanogene
BAP1 BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)
BCL2 B-cell CLL/lymphoma 2
BCL2L1 BCL2-like 1
BIRC5 baculoviral IAP repeat containing 5
BIRC7 baculoviral IAP repeat containing 7
BMI1 BMI1 proto-oncogene, polycomb ring finger
BRAF B-Raf proto-oncogene, serine/threonine kinase
BRCA1 breast cancer 1, early onset
BRCA2 breast cancer 2, early onset
BSG basigin (Ok blood group)
CA9 carbonic anhydrase IX
CACYBP calcyclin binding protein
CAPN1 calpain 1, (mu/I) large subunit
CASP3 caspase 3, apoptosis-related cysteine peptidase
CAV1 caveolin 1, caveolae protein, 22kDa
CCNB1 cyclin B1
CCND1 cyclin D1
CCND2 cyclin D2
CCR2 chemokine (C-C motif) receptor 2
CCR5 chemokine (C-C motif) receptor 5 (gene/pseudogene)
CCR7 chemokine (C-C motif) receptor 7
CD24 CD24 molecule
CD28 CD28 molecule
CD40 CD40 molecule, TNF receptor superfamily member 5
CD44 CD44 molecule (Indian blood group)
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CDH2 cadherin 2, type 1, N-cadherin (neuronal)
CDH3 cadherin 3, type 1, P-cadherin (placental)
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CDKN2A cyclin-dependent kinase inhibitor 2A
CEACAM3 carcinoembryonic antigen-related cell adhesion molecule 3
CEBPA CCAAT/enhancer binding protein (C/EBP), alpha
CEBPB CCAAT/enhancer binding protein (C/EBP), beta
CEBPD CCAAT/enhancer binding protein (C/EBP), delta
CHFR checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase
CISD2 CDGSH iron sulfur domain 2
CLDN1 claudin 1
CLDN2 claudin 2
CLIC1 chloride intracellular channel 1
CRTC3 CREB regulated transcription coactivator 3
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CTSB cathepsin B
CTSD cathepsin D
CTSL cathepsin L
CTTN cortactin
CXCL8 chemokine (C-X-C motif) ligand 8
CXCR4 chemokine (C-X-C motif) receptor 4
CYP2D6 cytochrome P450, family 2, subfamily D, polypeptide 6
CYP2W1 cytochrome P450, family 2, subfamily W, polypeptide 1
DAPK1 death-associated protein kinase 1
DNM2 dynamin 2
DNMT1 DNA (cytosine-5-)-methyltransferase 1
DNMT3A DNA (cytosine-5-)-methyltransferase 3 alpha
DNMT3B DNA (cytosine-5-)-methyltransferase 3 beta
DPYD dihydropyrimidine dehydrogenase
DYX1C1 dyslexia susceptibility 1 candidate 1
EDN1 endothelin 1
EDNRB endothelin receptor type B
EFNA1 ephrin-A1
EGFR epidermal growth factor receptor
EPHA2 EPH receptor A2
ERBB2 erb-b2 receptor tyrosine kinase 2
ERG v-ets avian erythroblastosis virus E26 oncogene homolog
ESR1 estrogen receptor 1
ESR2 estrogen receptor 2 (ER beta)
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit
EZR ezrin
FABP5 fatty acid binding protein 5 (psoriasis-associated)
FADD Fas (TNFRSF6)-associated via death domain
FAM162A family with sequence similarity 162, member A
FCGBP Fc fragment of IgG binding protein
FGFR1 fibroblast growth factor receptor 1
FLT1 fms-related tyrosine kinase 1
FLT4 fms-related tyrosine kinase 4
GLS glutaminase
GPC3 glypican 3
GRAMD4 GRAM domain containing 4
GRN granulin
GSTP1 glutathione S-transferase pi 1
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HPSE heparanase
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
IFNA1 interferon, alpha 1
IGF1 insulin-like growth factor 1 (somatomedin C)
IGFBP3 insulin-like growth factor binding protein 3
IL7 interleukin 7
IL7R interleukin 7 receptor
ITLN1 intelectin 1 (galactofuranose binding)
JUP junction plakoglobin
KDR kinase insert domain receptor
KMT2A lysine (K)-specific methyltransferase 2A
KRAS Kirsten rat sarcoma viral oncogene homolog
KRT19 keratin 19, type I
LAPTM4B lysosomal protein transmembrane 4 beta
LDHA lactate dehydrogenase A
LGALS3 lectin, galactoside-binding, soluble, 3
LGR5 leucine-rich repeat containing G protein-coupled receptor 5
MAD2L1 MAD2 mitotic arrest deficient-like 1 (yeast)
MAML2 mastermind-like 2 (Drosophila)
MAPK1 mitogen-activated protein kinase 1
MAPK3 mitogen-activated protein kinase 3
MAPT microtubule-associated protein tau
MCL1 myeloid cell leukemia 1
MCM2 minichromosome maintenance complex component 2
MCM5 minichromosome maintenance complex component 5
MDK midkine (neurite growth-promoting factor 2)
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase
MECP2 methyl CpG binding protein 2
MET MET proto-oncogene, receptor tyrosine kinase
MFSD2A major facilitator superfamily domain containing 2A
MGMT O-6-methylguanine-DNA methyltransferase
MINA MYC induced nuclear antigen
MIR101-1 microRNA 101-1
MIR101-2 microRNA 101-2
MIR126 microRNA 126
MIR15A microRNA 15a
MIR181A2 microRNA 181a-2
MIR181C microRNA 181c
MIR203A microRNA 203a
MIR204 microRNA 204
MIR21 microRNA 21
MIR210 microRNA 210
MIR32 microRNA 32
MIR34B microRNA 34b
MIR34C microRNA 34c
MIR485 microRNA 485
MIR497 microRNA 497
MIR519A1 microRNA 519a-1
MIR519A2 microRNA 519a-2
MKI67 marker of proliferation Ki-67
MLH1 mutL homolog 1
MMP11 matrix metallopeptidase 11
MMP2 matrix metallopeptidase 2
MMP9 matrix metallopeptidase 9
MPL MPL proto-oncogene, thrombopoietin receptor
MRE11A MRE11 meiotic recombination 11 homolog A (S. cerevisiae)
MSH2 mutS homolog 2
MTHFR methylenetetrahydrofolate reductase (NAD(P)H)
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MUC1 mucin 1, cell surface associated
MYCL v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
NDRG1 N-myc downstream regulated 1
NFE2L2 nuclear factor, erythroid 2-like 2
NOTCH1 notch 1
NOTCH2 notch 2
NQO1 NAD(P)H dehydrogenase, quinone 1
NR1H4 nuclear receptor subfamily 1, group H, member 4
NT5E 5'-nucleotidase, ecto (CD73)
OGG1 8-oxoguanine DNA glycosylase
PARK7 parkinson protein 7
PAX3 paired box 3
PCNA proliferating cell nuclear antigen
PDCD4 programmed cell death 4 (neoplastic transformation inhibitor)
PDGFB platelet-derived growth factor beta polypeptide
PGR progesterone receptor
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
PIWIL1 piwi-like RNA-mediated gene silencing 1
PIWIL4 piwi-like RNA-mediated gene silencing 4
PLA2G4A phospholipase A2, group IVA (cytosolic, calcium-dependent)
PLAU plasminogen activator, urokinase
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific)
PML promyelocytic leukemia
PODXL podocalyxin-like
PPARG peroxisome proliferator-activated receptor gamma
PROM1 prominin 1
PSCA prostate stem cell antigen
PTEN phosphatase and tensin homolog
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTK2 protein tyrosine kinase 2
PTP4A3 protein tyrosine phosphatase type IVA, member 3
RAB27B RAB27B, member RAS oncogene family
RAD50 RAD50 homolog (S. cerevisiae)
RAD51 RAD51 recombinase
RARB retinoic acid receptor, beta
RASSF1 Ras association (RalGDS/AF-6) domain family member 1
RB1 retinoblastoma 1
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A
RET ret proto-oncogene
RETN resistin
RHOA ras homolog family member A
RPS6KA6 ribosomal protein S6 kinase, 90kDa, polypeptide 6
RSF1 remodeling and spacing factor 1
RUNX1 runt-related transcription factor 1
RUNX3 runt-related transcription factor 3
SCGB2A2 secretoglobin, family 2A, member 2
SEPN1 selenoprotein N, 1
SERPINB5 serpin peptidase inhibitor, clade B (ovalbumin), member 5
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
SFN stratifin
SGOL1 shugoshin-like 1 (S. pombe)
SHBG sex hormone-binding globulin
SIK3 SIK family kinase 3
SIX1 SIX homeobox 1
SLC25A43 solute carrier family 25, member 43
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5
SLIT2 slit homolog 2 (Drosophila)
SOD1 superoxide dismutase 1, soluble
SOX11 SRY (sex determining region Y)-box 11
SPARC secreted protein, acidic, cysteine-rich (osteonectin)
SRC SRC proto-oncogene, non-receptor tyrosine kinase
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
TARDBP TAR DNA binding protein
TERT telomerase reverse transcriptase
TET1 tet methylcytosine dioxygenase 1
TFF3 trefoil factor 3 (intestinal)
TGFB1 transforming growth factor, beta 1
TIMP2 TIMP metallopeptidase inhibitor 2
TNF tumor necrosis factor
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b
TP53 tumor protein p53
TP73 tumor protein p73
TPM3 tropomyosin 3
TYMP thymidine phosphorylase
TYMS thymidylate synthetase
UBE2C ubiquitin-conjugating enzyme E2C
VEGFA vascular endothelial growth factor A
VEGFC vascular endothelial growth factor C
WWOX WW domain containing oxidoreductase
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase
XRCC1 X-ray repair complementing defective repair in Chinese hamster cells 1
XRCC3 X-ray repair complementing defective repair in Chinese hamster cells 3
YBX1 Y box binding protein 1
ZEB2 zinc finger E-box binding homeobox 2