cob Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description The central axis/core of the ear (distal end of the lateral branch/ear shoot) upon which the kernels (caryopses) are borne. The cob is similar to the central spike of the tassel (male inflorescence) in that it produces multiple rows of paired spikelets (polystichous phyllotaxy). (BRENDA Tissue and Enzyme Source Ontology, BTO_0000266)
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Genes

135 proteins co-occuring with the tissue cob in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
NDC1 NDC1 transmembrane nucleoporin 2.94998
COX6CP4 cytochrome c oxidase subunit VIc pseudogene 4 2.92197
ARHGAP21 Rho GTPase activating protein 21 2.64412
MT-ATP8 ATP synthase F0 subunit 8 2.47073
PPAN peter pan homolog (Drosophila) 2.07279
FAM20C family with sequence similarity 20, member C 2.02947
PPP1R17 protein phosphatase 1, regulatory subunit 17 1.82708
RPS14 ribosomal protein S14 1.69599
TMBIM6 transmembrane BAX inhibitor motif containing 6 1.63156
PITX1 paired-like homeodomain 1 1.62357
PTGS1 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 1.59127
RPS3 ribosomal protein S3 1.58486
LCOR ligand dependent nuclear receptor corepressor 1.42137
MYB v-myb avian myeloblastosis viral oncogene homolog 1.28771
UQCRQ ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa 1.27426
MTR 5-methyltetrahydrofolate-homocysteine methyltransferase 1.19267
UQCR10 ubiquinol-cytochrome c reductase, complex III subunit X 1.18645
COBL cordon-bleu WH2 repeat protein 1.16249
RPS11 ribosomal protein S11 1.14609
ATL3 atlastin GTPase 3 1.06912
THUMPD2 THUMP domain containing 2 1.04137
GIF gastric intrinsic factor (vitamin B synthesis) 1.02907
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 1.01418
UQCRB ubiquinol-cytochrome c reductase binding protein 1.00152
MATK megakaryocyte-associated tyrosine kinase 0.946947
XYLB xylulokinase homolog (H. influenzae) 0.943075
RPL5 ribosomal protein L5 0.940495
PHF19 PHD finger protein 19 0.924623
COX15 cytochrome c oxidase assembly homolog 15 (yeast) 0.919061
RPS5 ribosomal protein S5 0.915642
TRDN triadin 0.903275
UQCRC2 ubiquinol-cytochrome c reductase core protein II 0.866842
C8A complement component 8, alpha polypeptide 0.8601
RPS10 ribosomal protein S10 0.843286
A1BG alpha-1-B glycoprotein 0.835737
MN1 meningioma (disrupted in balanced translocation) 1 0.825268
GJB3 gap junction protein, beta 3, 31kDa 0.822757
KIR2DL3 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3 0.807299
ELF2 E74-like factor 2 (ets domain transcription factor) 0.783557
WIPF3 WAS/WASL interacting protein family, member 3 0.7711
KIR2DL1 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1 0.759086
CBL Cbl proto-oncogene, E3 ubiquitin protein ligase 0.752057
KDM5B lysine (K)-specific demethylase 5B 0.739266
CLEC4D C-type lectin domain family 4, member D 0.738854
CHURC1 churchill domain containing 1 0.733912
CYP4F22 cytochrome P450, family 4, subfamily F, polypeptide 22 0.731442
EMC3 ER membrane protein complex subunit 3 0.706812
MANBA mannosidase, beta A, lysosomal 0.6721
LAMB1 laminin, beta 1 0.661116
SPEG SPEG complex locus 0.65543
ZDHHC23 zinc finger, DHHC-type containing 23 0.644479
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.640833
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.631931
LRCH4 leucine-rich repeats and calponin homology (CH) domain containing 4 0.624658
SLC15A4 solute carrier family 15 (oligopeptide transporter), member 4 0.590036
SRL sarcalumenin 0.578016
NRG2 neuregulin 2 0.563637
WHSC1 Wolf-Hirschhorn syndrome candidate 1 0.561644
KLHL17 kelch-like family member 17 0.56005
COPA coatomer protein complex, subunit alpha 0.555274
RORB RAR-related orphan receptor B 0.55408
EMILIN1 elastin microfibril interfacer 1 0.546533
ALDH18A1 aldehyde dehydrogenase 18 family, member A1 0.544152
CCDC130 coiled-coil domain containing 130 0.533856
FES FES proto-oncogene, tyrosine kinase 0.531089
DHPS deoxyhypusine synthase 0.525955
GYS1 glycogen synthase 1 (muscle) 0.513743
CARD16 caspase recruitment domain family, member 16 0.50079
GSTM1 glutathione S-transferase mu 1 0.499615
AACS acetoacetyl-CoA synthetase 0.492572
ANGPTL6 angiopoietin-like 6 0.489057
DFFB DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase) 0.488276
DNAH8 dynein, axonemal, heavy chain 8 0.485545
ACP1 acid phosphatase 1, soluble 0.476589
MACF1 microtubule-actin crosslinking factor 1 0.466111
SLC9A6 solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6 0.458373
SCAI suppressor of cancer cell invasion 0.447961
FICD FIC domain containing 0.440274
CAPN1 calpain 1, (mu/I) large subunit 0.439123
ALDOC aldolase C, fructose-bisphosphate 0.428401
LST1 leukocyte specific transcript 1 0.426872
ALDOB aldolase B, fructose-bisphosphate 0.41848
MASP2 mannan-binding lectin serine peptidase 2 0.3976
MASP1 mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) 0.390044
SDHC succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa 0.38552
MPG N-methylpurine-DNA glycosylase 0.381379
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.380251
AKR1B1 aldo-keto reductase family 1, member B1 (aldose reductase) 0.376119
OCM2 oncomodulin 2 0.371994
OCM oncomodulin 0.36825
CKAP2 cytoskeleton associated protein 2 0.366007
SAA1 serum amyloid A1 0.365633
ALDOA aldolase A, fructose-bisphosphate 0.358546
BCO1 beta-carotene oxygenase 1 0.355942
LGMN legumain 0.348148
BHMT betaine--homocysteine S-methyltransferase 0.348148
DCC DCC netrin 1 receptor 0.344818
ARAF A-Raf proto-oncogene, serine/threonine kinase 0.342602
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.340388
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 0.33046
ADH1A alcohol dehydrogenase 1A (class I), alpha polypeptide 0.329361
DUSP1 dual specificity phosphatase 1 0.329361
FYB FYN binding protein 0.328994
DDX21 DEAD (Asp-Glu-Ala-Asp) box helicase 21 0.327164
TARBP2 TAR (HIV-1) RNA binding protein 2 0.322779
PPP3R1 protein phosphatase 3, regulatory subunit B, alpha 0.32132
GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase 0.310059
BEST1 bestrophin 1 0.303559
MAT1A methionine adenosyltransferase I, alpha 0.303198
AGAP2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 0.299601
ASPH aspartate beta-hydroxylase 0.295655
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 0.294223
RAG1 recombination activating gene 1 0.291008
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.287092
AK1 adenylate kinase 1 0.284962
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.280364
CBS cystathionine-beta-synthase 0.267446
ASNS asparagine synthetase (glutamine-hydrolyzing) 0.2559
CAPNS1 calpain, small subunit 1 0.249977
DAND5 DAN domain family member 5, BMP antagonist 0.248361
SUMF2 sulfatase modifying factor 2 0.245807
TCN2 transcobalamin II 0.243918
AK6 adenylate kinase 6 0.240826
AP1M2 adaptor-related protein complex 1, mu 2 subunit 0.240216
PRF1 perforin 1 (pore forming protein) 0.239913
CSN1S1 casein alpha s1 0.234878
PRSS21 protease, serine, 21 (testisin) 0.232317
PANX1 pannexin 1 0.229839
AP2M1 adaptor-related protein complex 2, mu 1 subunit 0.229032
RPS19 ribosomal protein S19 0.225144
EFS embryonal Fyn-associated substrate 0.222938
PDSS1 prenyl (decaprenyl) diphosphate synthase, subunit 1 0.220378
MGAM maltase-glucoamylase 0.219485
PTMS parathymosin 0.217554
GPR182 G protein-coupled receptor 182 0.212761