collagen trimer Gene Set

Dataset COMPARTMENTS Curated Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A protein complex consisting of three collagen chains assembled into a left-handed triple helix. These trimers typically assemble into higher order structures. (Gene Ontology, GO_0005581)
Similar Terms
Downloads & Tools

Genes

89 proteins localized to the collagen trimer cellular component from the COMPARTMENTS Curated Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
COL14A1 collagen, type XIV, alpha 1 0.663342
COL12A1 collagen, type XII, alpha 1 0.663342
COL15A1 collagen, type XV, alpha 1 0.663342
COL11A2 collagen, type XI, alpha 2 0.663342
COL11A1 collagen, type XI, alpha 1 0.663342
LUM lumican 0.663342
COL13A1 collagen, type XIII, alpha 1 0.663342
COL19A1 collagen, type XIX, alpha 1 0.663342
COL6A1 collagen, type VI, alpha 1 0.663342
COL1A2 collagen, type I, alpha 2 0.663342
COL11A2P1 collagen, type XI, alpha 2 pseudogene 1 0.663342
COL4A2 collagen, type IV, alpha 2 0.663342
COL4A3 collagen, type IV, alpha 3 (Goodpasture antigen) 0.663342
COL4A4 collagen, type IV, alpha 4 0.663342
COL4A6 collagen, type IV, alpha 6 0.663342
COL5A3 collagen, type V, alpha 3 0.663342
COL9A1 collagen, type IX, alpha 1 0.663342
COL5A1 collagen, type V, alpha 1 0.237908
COL10A1 collagen, type X, alpha 1 0.237908
COL4A5 collagen, type IV, alpha 5 0.237908
COL2A1 collagen, type II, alpha 1 0.237908
COL1A1 collagen, type I, alpha 1 0.237908
COL6A3 collagen, type VI, alpha 3 0.237908
COL16A1 collagen, type XVI, alpha 1 0.237908
COL8A1 collagen, type VIII, alpha 1 0.237908
COL7A1 collagen, type VII, alpha 1 0.237908
COL5A2 collagen, type V, alpha 2 0.237908
COL3A1 collagen, type III, alpha 1 0.237908
COL18A1 collagen, type XVIII, alpha 1 0.237908
COL9A3 collagen, type IX, alpha 3 0.237908
COL9A2 collagen, type IX, alpha 2 0.237908
COL24A1 collagen, type XXIV, alpha 1 0.098109
EMILIN2 elastin microfibril interfacer 2 0.098109
MBL2 mannose-binding lectin (protein C) 2, soluble 0.098109
SCARA3 scavenger receptor class A, member 3 0.098109
C1QTNF9B C1q and tumor necrosis factor related protein 9B 0.098109
WDR33 WD repeat domain 33 0.098109
SFTPA1 surfactant protein A1 0.098109
SFTPA2 surfactant protein A2 0.098109
C1QTNF3 C1q and tumor necrosis factor related protein 3 0.098109
EMID1 EMI domain containing 1 0.098109
C1QA complement component 1, q subcomponent, A chain 0.098109
COL23A1 collagen, type XXIII, alpha 1 0.098109
C1QTNF1 C1q and tumor necrosis factor related protein 1 0.098109
C1QTNF6 C1q and tumor necrosis factor related protein 6 0.098109
C1QTNF2 C1q and tumor necrosis factor related protein 2 0.098109
C1QTNF7 C1q and tumor necrosis factor related protein 7 0.098109
C1QTNF9 C1q and tumor necrosis factor related protein 9 0.098109
C1QTNF5 C1q and tumor necrosis factor related protein 5 0.098109
MFRP membrane frizzled-related protein 0.098109
C1QTNF8 C1q and tumor necrosis factor related protein 8 0.098109
C1QL4 complement component 1, q subcomponent-like 4 0.098109
C1QL3 complement component 1, q subcomponent-like 3 0.098109
C1QL2 complement component 1, q subcomponent-like 2 0.098109
C1QC complement component 1, q subcomponent, C chain 0.098109
C1QL1 complement component 1, q subcomponent-like 1 0.098109
COL6A6 collagen, type VI, alpha 6 0.098109
MARCO macrophage receptor with collagenous structure 0.098109
COL25A1 collagen, type XXV, alpha 1 0.098109
COL22A1 collagen, type XXII, alpha 1 0.098109
FCN1 ficolin (collagen/fibrinogen domain containing) 1 0.098109
FCN2 ficolin (collagen/fibrinogen domain containing lectin) 2 0.098109
FCN3 ficolin (collagen/fibrinogen domain containing) 3 0.098109
COL28A1 collagen, type XXVIII, alpha 1 0.098109
COL21A1 collagen, type XXI, alpha 1 0.098109
COL17A1 collagen, type XVII, alpha 1 0.098109
EMILIN1 elastin microfibril interfacer 1 0.098109
COL6A5 collagen, type VI, alpha 5 0.098109
COL6A2 collagen, type VI, alpha 2 0.098109
MSR1 macrophage scavenger receptor 1 0.098109
GLDN gliomedin 0.098109
OTOL1 otolin 1 0.098109
COLQ collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 0.098109
EDA ectodysplasin A 0.098109
COL4A1 collagen, type IV, alpha 1 0.098109
COL20A1 collagen, type XX, alpha 1 0.098109
COLEC11 collectin sub-family member 11 0.098109
COLEC10 collectin sub-family member 10 (C-type lectin) 0.098109
COLEC12 collectin sub-family member 12 0.098109
CTHRC1 collagen triple helix repeat containing 1 0.098109
ADIPOQ adiponectin, C1Q and collagen domain containing 0.098109
CCBE1 collagen and calcium binding EGF domains 1 0.098109
COL8A2 collagen, type VIII, alpha 2 0.098109
COL26A1 collagen, type XXVI, alpha 1 0.098109
SFTPD surfactant protein D 0.098109
C1QB complement component 1, q subcomponent, B chain 0.098109
COL27A1 collagen, type XXVII, alpha 1 0.03318
DCN decorin 0.03318
LOX lysyl oxidase 0.03318