cotinine-4650 Gene Set

Dataset CMAP Signatures of Differentially Expressed Genes for Small Molecules
Category transcriptomics
Type small molecule perturbation
Description small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis)
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Genes

197 genes differentially expressed following the cotinine-4650 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.

increased expression

Symbol Name
ACTN2 actinin, alpha 2
ADAM22 ADAM metallopeptidase domain 22
APOC4 apolipoprotein C-IV
ARHGAP25 Rho GTPase activating protein 25
B3GALT2 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
BMP8A bone morphogenetic protein 8a
BTG2 BTG family, member 2
BTNL8 butyrophilin-like 8
C21ORF2 chromosome 21 open reading frame 2
C8A complement component 8, alpha polypeptide
C9ORF9 chromosome 9 open reading frame 9
CABP1 calcium binding protein 1
CAMK1G calcium/calmodulin-dependent protein kinase IG
CASP1 caspase 1, apoptosis-related cysteine peptidase
CCL11 chemokine (C-C motif) ligand 11
CCL27 chemokine (C-C motif) ligand 27
CCR2 chemokine (C-C motif) receptor 2
CDH10 cadherin 10, type 2 (T2-cadherin)
CDKL1 cyclin-dependent kinase-like 1 (CDC2-related kinase)
CEBPD CCAAT/enhancer binding protein (C/EBP), delta
CHRNE cholinergic receptor, nicotinic, epsilon (muscle)
CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2
COL16A1 collagen, type XVI, alpha 1
CORT cortistatin
CRP C-reactive protein, pentraxin-related
CSHL1 chorionic somatomammotropin hormone-like 1
CXCR2 chemokine (C-X-C motif) receptor 2
DNAAF1 dynein, axonemal, assembly factor 1
EGR1 early growth response 1
EML3 echinoderm microtubule associated protein like 3
EPHA3 EPH receptor A3
FPR1 formyl peptide receptor 1
FRMD4B FERM domain containing 4B
FUT6 fucosyltransferase 6 (alpha (1,3) fucosyltransferase)
FYB FYN binding protein
GRIK3 glutamate receptor, ionotropic, kainate 3
GSN-AS1 GSN antisense RNA 1
HEATR6 HEAT repeat containing 6
HLA-DOA major histocompatibility complex, class II, DO alpha
HSPG2 heparan sulfate proteoglycan 2
HTR7P1 5-hydroxytryptamine (serotonin) receptor 7 pseudogene 1
ING2 inhibitor of growth family, member 2
IRF5 interferon regulatory factor 5
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
KALRN kalirin, RhoGEF kinase
KCND3 potassium channel, voltage gated Shal related subfamily D, member 3
KCNE1 potassium channel, voltage gated subfamily E regulatory beta subunit 1
KCNH1 potassium channel, voltage gated eag related subfamily H, member 1
KCNJ15 potassium channel, inwardly rectifying subfamily J, member 15
KLHL35 kelch-like family member 35
LST1 leukocyte specific transcript 1
LTA lymphotoxin alpha
LTBP4 latent transforming growth factor beta binding protein 4
LY9 lymphocyte antigen 9
MAN1C1 mannosidase, alpha, class 1C, member 1
MR1 major histocompatibility complex, class I-related
MS4A2 membrane-spanning 4-domains, subfamily A, member 2
MYT1L myelin transcription factor 1-like
NDOR1 NADPH dependent diflavin oxidoreductase 1
NPR1 natriuretic peptide receptor 1
NTRK3 neurotrophic tyrosine kinase, receptor, type 3
NUDC nudC nuclear distribution protein
OLR1 oxidized low density lipoprotein (lectin-like) receptor 1
ORC5 origin recognition complex, subunit 5
OTOF otoferlin
PCDH1 protocadherin 1
PCDH11Y protocadherin 11 Y-linked
PCSK5 proprotein convertase subtilisin/kexin type 5
POU3F2 POU class 3 homeobox 2
PRDM12 PR domain containing 12
PTCH2 patched 2
PTGER3 prostaglandin E receptor 3 (subtype EP3)
RFXAP regulatory factor X-associated protein
RGS12 regulator of G-protein signaling 12
RRH retinal pigment epithelium-derived rhodopsin homolog
RTEL1 regulator of telomere elongation helicase 1
SCN2B sodium channel, voltage gated, type II beta subunit
SCNN1A sodium channel, non voltage gated 1 alpha subunit
SERHL2 serine hydrolase-like 2
SERPINF1 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1
SGCD sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)
SIGLEC8 sialic acid binding Ig-like lectin 8
SLC3A1 solute carrier family 3 (amino acid transporter heavy chain), member 1
SLC44A1 solute carrier family 44 (choline transporter), member 1
SLC5A12 solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SPATA6 spermatogenesis associated 6
STX7 syntaxin 7
SUGP1 SURP and G patch domain containing 1
SULT4A1 sulfotransferase family 4A, member 1
TAOK1 TAO kinase 1
TLN2 talin 2
TMEM246 transmembrane protein 246
TMPRSS4 transmembrane protease, serine 4
TP63 tumor protein p63
TPM2 tropomyosin 2 (beta)
TRGV5 T cell receptor gamma variable 5
USP2 ubiquitin specific peptidase 2

decreased expression

Symbol Name
AAAS achalasia, adrenocortical insufficiency, alacrimia
ABHD17B abhydrolase domain containing 17B
ACADSB acyl-CoA dehydrogenase, short/branched chain
ANKFY1 ankyrin repeat and FYVE domain containing 1
ANXA2P1 annexin A2 pseudogene 1
ARL14 ADP-ribosylation factor-like 14
ARMC6 armadillo repeat containing 6
ATAD2B ATPase family, AAA domain containing 2B
BAG4 BCL2-associated athanogene 4
BAX BCL2-associated X protein
BHLHB9 basic helix-loop-helix domain containing, class B, 9
C11ORF63 chromosome 11 open reading frame 63
C1ORF105 chromosome 1 open reading frame 105
C4ORF19 chromosome 4 open reading frame 19
CA9 carbonic anhydrase IX
CCDC85C coiled-coil domain containing 85C
CEP131 centrosomal protein 131kDa
CHD8 chromodomain helicase DNA binding protein 8
CHM choroideremia (Rab escort protein 1)
CLUHP3 clustered mitochondria (cluA/CLU1) homolog pseudogene 3
CTNNBIP1 catenin, beta interacting protein 1
CWF19L1 CWF19-like 1, cell cycle control (S. pombe)
DDB1 damage-specific DNA binding protein 1, 127kDa
DENND2D DENN/MADD domain containing 2D
DENND4A DENN/MADD domain containing 4A
EFNA3 ephrin-A3
ELP3 elongator acetyltransferase complex subunit 3
EML4 echinoderm microtubule associated protein like 4
ERAP2 endoplasmic reticulum aminopeptidase 2
ERF Ets2 repressor factor
FAM131A family with sequence similarity 131, member A
FKBP10 FK506 binding protein 10, 65 kDa
FPGS folylpolyglutamate synthase
FUZ fuzzy planar cell polarity protein
GABPA GA binding protein transcription factor, alpha subunit 60kDa
GALT galactose-1-phosphate uridylyltransferase
GID4 GID complex subunit 4
GLDC glycine dehydrogenase (decarboxylating)
GLS2 glutaminase 2 (liver, mitochondrial)
GPATCH2L G patch domain containing 2-like
GTF2H2B general transcription factor IIH, polypeptide 2B (pseudogene)
HELZ helicase with zinc finger
HIVEP1 human immunodeficiency virus type I enhancer binding protein 1
HMOX1 heme oxygenase 1
IFT54 intraflagellar transport 54
INCENP inner centromere protein antigens 135/155kDa
LIG4 ligase IV, DNA, ATP-dependent
LIMS2 LIM and senescent cell antigen-like domains 2
LMAN1 lectin, mannose-binding, 1
LRIG2 leucine-rich repeats and immunoglobulin-like domains 2
MRM1 mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)
MX1 MX dynamin-like GTPase 1
NDP Norrie disease (pseudoglioma)
NME5 NME/NM23 family member 5
NPFFR1 neuropeptide FF receptor 1
OSMR oncostatin M receptor
OTUB2 OTU deubiquitinase, ubiquitin aldehyde binding 2
PADI1 peptidyl arginine deiminase, type I
PAK3 p21 protein (Cdc42/Rac)-activated kinase 3
PAK6 p21 protein (Cdc42/Rac)-activated kinase 6
PARM1 prostate androgen-regulated mucin-like protein 1
PFDN6 prefoldin subunit 6
PLA2G4A phospholipase A2, group IVA (cytosolic, calcium-dependent)
PLCD1 phospholipase C, delta 1
PLEKHO1 pleckstrin homology domain containing, family O member 1
PLSCR4 phospholipid scramblase 4
PRR4 proline rich 4 (lacrimal)
PRSS53 protease, serine, 53
PWAR5 Prader Willi/Angelman region RNA 5
R3HCC1L R3H domain and coiled-coil containing 1-like
ROM1 retinal outer segment membrane protein 1
RPH3AL rabphilin 3A-like (without C2 domains)
SCML2 sex comb on midleg-like 2 (Drosophila)
SETD8 SET domain containing (lysine methyltransferase) 8
SH3TC2 SH3 domain and tetratricopeptide repeats 2
SIRAL2 SIR2 antiphage like 2
SLC22A18 solute carrier family 22, member 18
SLITRK5 SLIT and NTRK-like family, member 5
SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
SMEK2 SMEK homolog 2, suppressor of mek1 (Dictyostelium)
SSBP3 single stranded DNA binding protein 3
TEX40 testis expressed 40
THRAP3 thyroid hormone receptor associated protein 3
TMEM121 transmembrane protein 121
TMEM156 transmembrane protein 156
TOR4A torsin family 4, member A
TRAPPC13 trafficking protein particle complex 13
TRIM16 tripartite motif containing 16
TWISTNB TWIST neighbor
ULBP2 UL16 binding protein 2
WDR76 WD repeat domain 76
ZBTB22 zinc finger and BTB domain containing 22
ZFP30 ZFP30 zinc finger protein
ZNF141 zinc finger protein 141
ZNF165 zinc finger protein 165
ZNF510 zinc finger protein 510
ZNF747 zinc finger protein 747
ZNF76 zinc finger protein 76
ZNF787 zinc finger protein 787